Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_07g0012900 | OGI:09005370 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr07:14951107-14952349 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ctacgcaccatctcgatcgcacatgaactggtacacccaagtctccacagtcgtgtcagcagaagaagcaaaaaatccctgcaccccctcattctcttggcgtcccaaataatttccaacgacaaccttatcattagtactaatgggcaatgcatcaatcctcttccacaatgaagcataagggtcacAaaactgtggcactggaggtggaggaggattaccaagctgatccaccaatggtccttgtgttgctaattttctcagtggcatctgtgaaacggttcttaggctttggttgctgcttcttacttggggactttgaacctcttggtctctttttaccagctcgagatgtaccagaagagccATTATCTGCACATGTGGGAGATGGTAATGTGTCCGAGTCTTCTGCAGCAATGTCGATAGGACGTGCATAGCTGGAAATATCATTCAATCCTTCATCGTCACTGCTATCAGATTTGTTATCAACGTCACAACATGTTTGTTGGTCCATGGCAAGagagccatctgcgttactacctgagaaaagctcttgcatctcatgaaagtattctattggcttagaaagcaaacgcctatccctatcctgcatgttgatagaataattagtaaaaaggcaaaccatggaagaatctaataattctcaagaaagctaaatttaaatgtgagcagaagtattgtgttataatatacttgctaacttaaatctgtacaaaagcatggcaatacattttttacaagaaattggcacatattcatgagcaatcaaactatccatttacacattacgaaaagtatatattgataaaatcctcaaaacagttgacctcatagaactaatggcaaaaaaaaattaaatgtttagcagccacttactttgagagtagccttttcagactctgatatggtcagtttacatttatagcatcaaaaccattgccactcttgtttaaagccgtttcaactatcttccagttctctttgtagtgcctatagtgacgggtcacttgggcagacgttacacccatagcaaactctttatttaaggcatcagcacatttcatatggtgctgagatttccatatgaagtttgcatgttggtctttcttgtactcgatgtaccaatcaagcatgaacttagtttgttcatcatcccaactatggatctctcacgagaagacccttcagtctcaaccttcccctttcccttggctttccccat
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| CDS seq | atggggaaagccaagggaaaggggaaggttgagactgaaggttgggatgatgaacaaactaagttcatgcttgattggtacatcgagtacaagaaagaccaacatgcaaacttcatatggaaatctcagcaccatatgaaatgtgctgatgccttaaataaagagtttgctatgggtgtaacgtctgcccaagtgacccgtcactataggcactacaaagagaactggaagatagttgaaacggctttaaacaagagtggcaatggttttgatgctataaatgatagggataggcgtttgctttctaagccaatagaatactttcatgagatgcaagagcttttctcaggtagtaacgcagatggctctCTTGCCATGGACCAACAAACATGTTGTGACGTTGATAACAAATCTGATAGCAGTGACGATGAAGGATTGAATGATATTTCCAGCTATGCACGTCCTATCGACATTGCTGCAGAAGACTCGGACACATTACCATCTCCCACATGTGCAGATAATggctcttctggtacatctcgagctggtaaaaagagaccaagagtaagaagcagcaaccaaagcctaagaaccgtttcacagatgccactgagaaaattagcaacacaaggaccattggtggatcagcttggtaatcctcctccacctccagtgccacagtttTgtgacccttatgcttcattgtggaagaggattgatgcattgcccattagtactaatgataaggttgtcgttggaaattatttgggacgccaagagaatgagggggtgcagggattttttgcttcttctgctgacacgactgtggagacttgggtgtaccagttcatgtgcgatcgagatggtgcgtag
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| Protein seq | MGKAKGKGKVETEGWDDEQTKFMLDWYIEYKKDQHANFIWKSQHHMKCADALNKEFAMGVTSAQVTRHYRHYKENWKIVETALNKSGNGFDAINDRDRRLLSKPIEYFHEMQELFSGSNADGSLAMDQQTCCDVDNKSDSSDDEGLNDISSYARPIDIAAEDSDTLPSPTCADNGSSGTSRAGKKRPRVRSSNQSLRTVSQMPLRKLATQGPLVDQLGNPPPPPVPQFCDPYASLWKRIDALPISTNDKVVVGNYLGRQENEGVQGFFASSADTTVETWVYQFMCDRDGA |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_07g0012900 | OsNaBo_07g0012900.01 | Chr07 | 14951107 | 14952349 | - | NAM | ||
| CDS seq | atggggaaagccaagggaaaggggaaggttgagactgaaggttgggatgatgaacaaactaagttcatgcttgattggtacatcgagtacaagaaagaccaacatgcaaacttcatatggaaatctcagcaccatatgaaatgtgctgatgccttaaataaagagtttgctatgggtgtaacgtctgcccaagtgacccgtcactataggcactacaaagagaactggaagatagttgaaacggctttaaacaagagtggcaatggttttgatgctataaatgatagggataggcgtttgctttctaagccaatagaatactttcatgagatgcaagagcttttctcaggtagtaacgcagatggctctCTTGCCATGGACCAACAAACATGTTGTGACGTTGATAACAAATCTGATAGCAGTGACGATGAAGGATTGAATGATATTTCCAGCTATGCACGTCCTATCGACATTGCTGCAGAAGACTCGGACACATTACCATCTCCCACATGTGCAGATAATggctcttctggtacatctcgagctggtaaaaagagaccaagagtaagaagcagcaaccaaagcctaagaaccgtttcacagatgccactgagaaaattagcaacacaaggaccattggtggatcagcttggtaatcctcctccacctccagtgccacagtttTgtgacccttatgcttcattgtggaagaggattgatgcattgcccattagtactaatgataaggttgtcgttggaaattatttgggacgccaagagaatgagggggtgcagggattttttgcttcttctgctgacacgactgtggagacttgggtgtaccagttcatgtgcgatcgagatggtgcgtag
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| Protein seq | MGKAKGKGKVETEGWDDEQTKFMLDWYIEYKKDQHANFIWKSQHHMKCADALNKEFAMGVTSAQVTRHYRHYKENWKIVETALNKSGNGFDAINDRDRRLLSKPIEYFHEMQELFSGSNADGSLAMDQQTCCDVDNKSDSSDDEGLNDISSYARPIDIAAEDSDTLPSPTCADNGSSGTSRAGKKRPRVRSSNQSLRTVSQMPLRKLATQGPLVDQLGNPPPPPVPQFCDPYASLWKRIDALPISTNDKVVVGNYLGRQENEGVQGFFASSADTTVETWVYQFMCDRDGA
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g02720 | SBH | 0.000000 | 0.000000 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0016500 | SBH | 0.0 | 0.0 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_05g0001400 | SBH | 0.0 | 0.0 | 0.689684 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0003900 | SBH | 0.0 | 0.091281 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0015210 | RBH | 0.0 | 0.0 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0148300 | SBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0022390 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0224200 | SBH | 0.0361485 | 0 | 0.035754 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0003930 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0003800 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0003850 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0015420 | SBH | 0.000000 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0022760 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G013050 | RBH | 0.0 | 0.0 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0003860 | RBH | 0.0 | 0.0 | 0.0 |
