Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_07g0009530 | OGI:07004740 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr07:9657990-9660880 | ||||||||
| Gene Symbol | RLCK237, OsRLCK237 | ||||||||||
| DNA seq | tcaggccgacatggtcggacatgacgccgaacacgaaggaagtggagagaaggactcctccgccgtcgtcgtcgtcgcgttggggccggcggctccacggaggggcaccggcgccgggtagaaggcgtggcctttgcgctgcagcgtgccgttggtcagctcgagcatgcctcctgccgtcaccgctgccacgccgtcgagggtgaggttggcgccggtgaagccagagtagatgaactggacatcgccggcgcacctcgtggtgaggctcaggccaaggcagatgcttcatggtaatggtagtaactctcggttcgtgccctctagccatacgctctgtcgtctggtctgtgaggaaggctgtgtgatattcaacagaacagatacgatgtccaagtatgcaagagcctgtttagctggcgaaaagaaaattattaattaggtgtcacatctaatgtttgaccggatattggaatagattttcggacatgagtgaataaactaattttataactagcttagcctggaaaccgcgagatgaatctttgagcctaattaatccaccattagcacatgtgggttactgtaacactaattatgaactaattagactcaaaagattcaatgtcatattttcgaaaaaaaattttggggaactaaaccagacctaattcttcttctctgaaatctcttttactctgcttatctaccgtgatgtactcagaacacacaacacgcccggagaagaaattatggaaatatatatacatattttgttttcttttgaaccacaccacttaaaaaaacaatttttcggacataccctctgttttattgcaggcgggctaaaagaatgtccacatgtaaaataatttgaatgttgttctgtaaaggaccgtatgttaaaattgattttcgtaggccggtaacatttttaataactttgatggaaacaaccgttattataaaatgttgttttacccccgcaaaaaaaaatgttgttctacaatcgtaactgcttgtgttatggaaagtaggcatggcttttctttttagaaaaagtacgaattaCccccgaacaatcgcggtcgaccgattaccccctaaaccagaaaaccaacatcgttcaccctcaacttttaataccagacaaactacccctccagagcggtttttgtcctacgtggtgtacgcgtggcaatccagtcaacattttatttattcaaaaaatgtgggacccacctgtcatactcctcttcccctcttccgctctcttctctctctctctcgctctttctctctctctcagtatgacggcggcggacggcgtggtcggcgcgcaaggcggtgcggtcgatggtgggcggggcggtcggcgcggatggcggcgaggcggagaggtgggtagcggcggagagtcagccggaggagaggcgaggcgcaaccgcctctgcgtcccgcgccaccactgctccctcccggaggagttcaccgctgcctgcgtcccacatcgccgctgctccctcccggagttcgccgccaccacctctgcgtcccgcgtgcgccaccgcctccgcgtccctctcctccgccgcctgcctctccaccttgcccgcatctccgctaccgcccgcctgtccgcgccgaccgcccccgcccaccgttggccgcactgttgtgcacgccgactgcaccgttcgccaccgtccatgcactgccatgcgcatgccgagagagaggaagagcaagagagagaagagagagaggaagAggggaagaaatgtatgataggtgggtcctacattttttaataaataaaatcctgattggattgccacgcgtacgccacgtaggacaaaaccgctctagattgggtcgagggaggtaatttgtgcattattgaaagttgagggtgaacgttgtctggtttctgggatgaggggggtaattcggttgacacgatagttccgaggggagggtaattcgtactttttcctttctttttcagatgtgcatatgcatatttccatgtacttgcgagtatttcatgtaatcaccacgcaattgccccaactccagaaggaagatttccgctattatctaaggagtttgctactgaaatcgagaactaggccatgtgccacagttgattatctgtgacatgttgaatggagcttccgcgcatttattttcttttccgttgtgctattttattcttgtgttgccctcaagataaataaatgtaagtgagccataagggttatcacaattatttttattaataaatgttagtttttttttgtgatgttggctgttatattatcttcgtactgtgtgtgataggttgattctggactagcacgtatacacagtaggttctatttttggatggagttgccgtacgtgcgaactctcagcggtgtatcaattaaaggagcaactctgttctactccctctgttttatattataaattatttgacttttttttcagtcaaactttgttatatttgacgaaatttataaaaaaattagcaacatataaaatattaaattagttttattaaatccaacattgaatatattttaataatatgtttgttttgtgttgaaaatactgctatatttttctataagttatttaaaaagttcaactagaaaaaaaagtcaaacaacttataatataaaatggatggagtactgattaagtagcccaagtttcacccgcaaattcataatctattcatttcacattgtgcaaaaaaaaaaaagcatacgaaacaattacaagccataaacatcatcagggaataaatgtgagactcaaaattacagactccatcgaggattatgccagtctaactgcatgatggactttctaatgggacccat
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| CDS seq | atgggtcccattagaaagtccatcatgcagttagactggcataatcctcgatggagtctcatctgccttggcctgagcctcaccacgaggtgcgccggcgatgtccagttcatctactctggcttcaccggcgccaacctcaccctcgacggcgtggcagcggtgacggcaggaggcatgctcgagctgaccaacggcacgctgcagcgcaaaggccacgccttctacccggcgccggtgcccctccgtggagccgccggccccaacgcgacgacgacgacggcggaggagtccttctctccacttccttcgtgttcggcgtcatgtccgaccatgtcggcctga |
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| Protein seq | MGPIRKSIMQLDWHNPRWSLICLGLSLTTRCAGDVQFIYSGFTGANLTLDGVAAVTAGGMLELTNGTLQRKGHAFYPAPVPLRGAAGPNATTTTAEESFSPLPSCSASCPTMSA |
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| Function | L-type lectin-domain containing receptor kinase SIT2 [UniProtKB/Swiss-Prot:Q7XUN6] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_07g0009530 | OsNaBo_07g0009530.01 | Chr07 | 9657990 | 9660880 | - | NAM | ||
| CDS seq | atgggtcccattagaaagtccatcatgcagttagactggcataatcctcgatggagtctcatctgccttggcctgagcctcaccacgaggtgcgccggcgatgtccagttcatctactctggcttcaccggcgccaacctcaccctcgacggcgtggcagcggtgacggcaggaggcatgctcgagctgaccaacggcacgctgcagcgcaaaggccacgccttctacccggcgccggtgcccctccgtggagccgccggccccaacgcgacgacgacgacggcggaggagtccttctctccacttccttcgtgttcggcgtcatgtccgaccatgtcggcctga
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| Protein seq | MGPIRKSIMQLDWHNPRWSLICLGLSLTTRCAGDVQFIYSGFTGANLTLDGVAAVTAGGMLELTNGTLQRKGHAFYPAPVPLRGAAGPNATTTTAEESFSPLPSCSASCPTMSA |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0133000 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g03830 | SBH | 0.245689 | 0.083531 | 0.114038 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0133000 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0009630 | SBH | 0.401883 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0009770 | SBH | 0.000000 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0009640 | SBH | 0.200641 | 1.055119 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0009360 | SBH | 0.026981 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0009570 | SBH | 0.0 | 0.0 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0010030 | RBH | 0.051741 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0009520 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0009550 | SBH | 0.294778 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0009520 | SBH | 0.704473 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0009670 | SBH | 0.096304 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0001930 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G009560 | SBH | 0.0 | 0.0 | 0.189250 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
