Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_07g0005010 | OGI:07012880 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr07:4372737-4377276 | ||||||||
| Gene Symbol | RISBZ1, OsbZIP58, OsEnS-92, OsSMF1, SMF1, OsRISBZ1, RISBZ1/bZIP58 | ||||||||||
| DNA seq | tattccaaccatttttcgctatattaaGggagaccaccatgtcccattgtccctcattttctcaatttgaaacaacaacagccgcagatgttcctcagcaagtccaaaatccatagaaactacagtttcagacaaaaacagcgacaacaactactactacaaaacagcatttgcaggttgcaaatttgcacctccaaatgctctcatcatgttgttaggatatgctcctactactgaagctccatgttgacaagctcatttgcatccatcagagacgatccccatgctgtatattcattcgaacttgcgccgccaccacaagctctattctgaagatgctgcaagctcgccatctgttgctgctgcagctgcactggatctgttgggtcaatcttctcgacagaatccacaatctggaacgctggagaaacctggtgcatgaagctgttaacaccggcattgttagcgttggagaagtagttcattgggttgttgttctggatcggcacagaagcatcagagttgacattgaggggagattgcatgtcaggaatggcctggtgaagttgtctagcccctgtaaccatcttcacactctcctctgccatcctcacctgcaatcatgtcaagatgttagctaacccacatcgcatggttcatgaattttcagttgtggtctagaagcatatggctataagatacgacaccgcagtagtgtagtgtagctcaggttctttgttaaaattgattgtgatccattgtgtgaattggttatcaccattcggcaagcgattatttacacctggtacgttgcaggaaaaagaaaagtagttacacccggttgtttcaagacaaaacaagtgagtctaattgttgcaggttataatagatggcaaacaacttaatccttcgaatggagcaagaggacaacatttgcaatatctcctgtaccaaattttaagaacaaatgctagaagttcgtttcattccaagaaaatttggtatatgtttgatatgtagaatattccggttttctacaccatgaaagatgcacaatactgaccagaatcaatgcacatggataattggatacctatttgaaagagaggttcagttcatacagaggactaaaaggcacttaaacagttgcatacctttgctcttagggcttcaatgtctgccattagtaccctattgtcaatagcagcagcactgtacttctgatttgcatcagcaagacgcctcaacagagaagagttttcaacccttaatagtgatacctgcaatgatttagcaacaattacacttgttacttacatattccaaaactttgttgtgcagtcaaatggaatagtgtaaaacacaaaacctgctcctccaggtcttttaggcgagctgcctttctgcttcttgagcgtctagctgactcccggttggattccttcctgaaattggacaagaacacaagctcaaatctcaaatatccggctgtatttattacacAaaaaaaggcgacatgaatgtctgactgctgcgaaaaaaaagaccacagtagataaactcaaTttttcatatgtagaaaaagcaactagacacaacaggacatgatattcccagcatgttatgaaaagcaagaagcaaatgcctcctaaattgttctaatcatacacgttgcatttttccttttttgcatgaatagctgcttgcacggaaacaataattatccttaatgcaccagcttgtaacaagcattaccaaaattcagtcaggtatataaagcattgaaacacctagcaagcattagctcaagcatttctaagaaaaaagtgagaatgttgtatataatcaaatacatccagtacaaacatgaaacacctagaaagaaactaaggatccattatcttgataatctaaagcatattacttAaaagctatttctaagaaaaaaggaaatcaatagatgtaaaagtcccctaatttctaatgctaatgctcagtgtttactctttgtatgtgttgaattgaaaaataaaaatacacaagcaaaagaatacatattaccttttcttcactttatcttcttcatcaaggatcatatttcccattgcctctgcatctccttccatatcatcatcctctgatggtgatggctcccttgaggaaccactcgtagcttgcttggcatgagcatctgtattttgatttacatatgggcctgatcctccatttgggccaggacttaacttggtctgcactagtatcccgttacctgaatgtgtcgaaatagggggaaaatccaatcagatatatataatatgaaaactacattacgcaaaaattagatttgcttacaacattagagattactcataagtcataactcataggtactgagaagatttaactaagcacatatgcataatagaataccttcaatgcacttctgtgaactcaggatggaaccaactatactcagtgatgttttattgcctagaggactctcagaatgtattgcaccagaggcctgtggatggatggacatgccAaaaattgaagtcagaatgcaaagggacttaataactatcggagctaaacacacactctcatagttaattagttctaatggcattataatcttatatagggaaccgtttcacattgtaaactgaaatcaactagcaaaagctcagatcaacatgttctgtagtcatttgtaaactgaacccacataatgagttcaaagtatgatatccaattgcaaaaattatataccccacttagaaaactaacataaaaagaagatattttctccggtccaacaaaaagtacctcgaggtaccggtacctcacggtaccaaatcattttcgatcgttggatctaattaggcaggatgtgcattgttagatccaacgatcggaaacgatttggtaccatgaggtaccagtacctcgaggtactttttgttggagcggagcaaatctctaaaaagaaagctctgcttccccatctacaatcgactggtgagaatttctaggtccaaatttaccagattccaatataacagtttctttttttctactaaaataatttcatcttccaagggtatgtgacctaataattccttcaaacaacaataataagaaaagtaatgcaaatatggtaaaatacagaatttccaaaaaatattccatgaatcataccgcctaggaccacccaaaataagtgcaatgacctatgatctatacatcatttttgcaacatgtaaccaaattgttaactttgcactcaagcaatgcacggctccaagaagtcacataaagtctctacacctccatgcaatcctaatccatattactcctaaatctatacacggaaataatataaatattataccacaccccgacaatattaaagtttgtctcatcccactctgacaatattaaagtatggataagaaagcacacacgtgagtagtgcctgggcttacgatgcggatatcgacatcaacgcgtgctcttatAaaaATTAATTTATACTCCCTCCTTATAATATAAGAGATTTAGAGGGATGTGACACATCTAGTACTATGAATCTGGACAGAGAGCCGGTCCAGATTCATAGTAACAGCTAGGATATGTCACATCTATGCTAAATTGCGACCATCTAGCCACAGTAATCACAGGAAATGCCCTAAAAATTGCACTTAATTACGCCACAGCCATCCCATCACCACCACCCCAAATGGTGAACCCACCAGTACAACTGTACAAGCCATGAAGCAAGCAAAGCAAGCAGCGATCGAGATGAGAGAGaCAACTGTACAAGCCATGAAGCAAGCAAAGCAAGCAGCGATCGAGATGAGAGAGAGTACCCTCCACATGGCGACGGTGGCGAGGTCCTCGTCCAGCTTCCGCTTCAGCATCGCGTTGTACTCCACGGGGTCCATCGCCGCGCTCGCCGGCGCCGCCGGAAGCGCGGCCGCGGGCATGGGCATCACCCCCACCGCCTCACGATCGCCGTAGCCCCTACTCCAGCGCGCCGCCGCCTCCGCCGCCGCCGCCGGCATCGGGCTAGGGTAAATCGCCGCGCCGTCCGGGCTCGCCGCCGGTGCAGGGACGCCGTCGAGCTCCTCCAGAAACCTCTCGAGGTTCCACCCCGACGGGCACCGCTCCAGCAACCCGCCGCCGCTCACCGCGCCGACGTCATCTACTCCGGCGGCCGCCGCCGGCTGCACCGGCGGCGGCGGAGCCCACAGCGGGTCGGGGATCTCGTCGACGGCGAACACGTGCTCCATTGCGCTCTCGGACGAGTTTGAAATGAATTCGCGAGGGGTTTTCGAACCGAAATCGGGGCGAAATTGAAAACGCTGGAAAAGTTTGGGAGAAATTCGATCAAATGCTTTGGAATTTGGTTTCGCGGGAGGAAGCGGAGAGGAGGAGGCTTCGGAGAGAAGGAAATGGTGGGAAAGCTACGGCTACGCAACCCATGGGTTTTTTTTTCTTCTCTTTTTTTTTCTTTTTTTTTTCAATTTTGAACTGA
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| CDS seq | ATGGAGCACGTGTTCGCCGTCGACGAGATCCCCGACCCGCTGTGGGCTCCGCCGCCGCCGGTGCAGCCGGCGGCGGCCGCCGGAGTAGATGACGTCGGCGCGGTGAGCGGCGGCGGGTTGCTGGAGCGGTGCCCGTCGGGGTGGAACCTCGAGAGGTTTCTGGAGGAGCTCGACGGCGTCCCTGCACCGGCGGCGAGCCCGGACGGCGCGGCGATTTACCCTAGCCCGATGCCGGCGGCGGCGGCGGAGGCGGCGGCGCGCTGGAGTAGGGGCTACGGCGATCGTGAGGCGGTGGGGGTGATGCCCATGCCCGCGGCCGCGCTTCCGGCGGCGCCGGCGAGCGCGGCGATGGACCCCGTGGAGTACAACGCGATGCTGAAGCGGAAGCTGGACGAGGACCTCGCCACCGTCGCCATGTGGAGGgcctctggtgcaatacattctgagagtcctctaggcaataaaacatcactgagtatagttggttccatcctgagttcacagaagtgcattgaaggtaacgggatactagtgcagaccaagttaagtcctggcccaaatggaggatcaggcccatatgtaaatcaaaatacagatgctcatgccaagcaagctacgagtggttcctcaagggagccatcaccatcagaggatgatgatatggaaggagatgcagaggcaatgggaaatatgatccttgatgaagaagataaagtgaagaaaaggaaggaatccaaccgggagtcagctagacgctcaagaagcagaaaggcagctcgcctaaaagacctggaggagcaggtatcactattaagggttgaaaactcttctctgttgaggcgtcttgctgatgcaaatcagaagtacagtgctgctgctattgacaatagggtactaatggcagacattgaagccctaagagcaaaggtgaggatggcagaggagagtgtgaagatggttacaggggctagacaacttcaccaggccattcctgacatgcaatctcccctcaatgtcaactctgatgcttctgtgccgatccagaacaacaacccaatgaactacttctccaacgctaacaatgccggtgttaacagcttcatgcaccaggtttctccagcgttccagattgtggattctgtcgagaagattgacccaacagatccagtgcagctgcagcagcaacagatggcgagcttgcagcatcttcagaatagagcttgtggtggcggcgcaagttcgaatgaatatacagcatggggatcgtctctgatggatgcaaatgagcttgtcaacatggagcttcagtag
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| Protein seq | MEHVFAVDEIPDPLWAPPPPVQPAAAAGVDDVGAVSGGGLLERCPSGWNLERFLEELDGVPAPAASPDGAAIYPSPMPAAAAEAAARWSRGYGDREAVGVMPMPAAALPAAPASAAMDPVEYNAMLKRKLDEDLATVAMWRASGAIHSESPLGNKTSLSIVGSILSSQKCIEGNGILVQTKLSPGPNGGSGPYVNQNTDAHAKQATSGSSREPSPSEDDDMEGDAEAMGNMILDEEDKVKKRKESNRESARRSRSRKAARLKDLEEQVSLLRVENSSLLRRLADANQKYSAAAIDNRVLMADIEALRAKVRMAEESVKMVTGARQLHQAIPDMQSPLNVNSDASVPIQNNNPMNYFSNANNAGVNSFMHQVSPAFQIVDSVEKIDPTDPVQLQQQQMASLQHLQNRACGGGASSNEYTAWGSSLMDANELVNMELQ |
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| Function | bZIP transcription factor RISBZ1 [UniProtKB/Swiss-Prot:Q6ZLB0] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_07g0005010 | OsNaBo_07g0005010.01 | Chr07 | 4372737 | 4377276 | - | NAM | ||
| CDS seq | ATGGAGCACGTGTTCGCCGTCGACGAGATCCCCGACCCGCTGTGGGCTCCGCCGCCGCCGGTGCAGCCGGCGGCGGCCGCCGGAGTAGATGACGTCGGCGCGGTGAGCGGCGGCGGGTTGCTGGAGCGGTGCCCGTCGGGGTGGAACCTCGAGAGGTTTCTGGAGGAGCTCGACGGCGTCCCTGCACCGGCGGCGAGCCCGGACGGCGCGGCGATTTACCCTAGCCCGATGCCGGCGGCGGCGGCGGAGGCGGCGGCGCGCTGGAGTAGGGGCTACGGCGATCGTGAGGCGGTGGGGGTGATGCCCATGCCCGCGGCCGCGCTTCCGGCGGCGCCGGCGAGCGCGGCGATGGACCCCGTGGAGTACAACGCGATGCTGAAGCGGAAGCTGGACGAGGACCTCGCCACCGTCGCCATGTGGAGGgcctctggtgcaatacattctgagagtcctctaggcaataaaacatcactgagtatagttggttccatcctgagttcacagaagtgcattgaaggtaacgggatactagtgcagaccaagttaagtcctggcccaaatggaggatcaggcccatatgtaaatcaaaatacagatgctcatgccaagcaagctacgagtggttcctcaagggagccatcaccatcagaggatgatgatatggaaggagatgcagaggcaatgggaaatatgatccttgatgaagaagataaagtgaagaaaaggaaggaatccaaccgggagtcagctagacgctcaagaagcagaaaggcagctcgcctaaaagacctggaggagcaggtatcactattaagggttgaaaactcttctctgttgaggcgtcttgctgatgcaaatcagaagtacagtgctgctgctattgacaatagggtactaatggcagacattgaagccctaagagcaaaggtgaggatggcagaggagagtgtgaagatggttacaggggctagacaacttcaccaggccattcctgacatgcaatctcccctcaatgtcaactctgatgcttctgtgccgatccagaacaacaacccaatgaactacttctccaacgctaacaatgccggtgttaacagcttcatgcaccaggtttctccagcgttccagattgtggattctgtcgagaagattgacccaacagatccagtgcagctgcagcagcaacagatggcgagcttgcagcatcttcagaatagagcttgtggtggcggcgcaagttcgaatgaatatacagcatggggatcgtctctgatggatgcaaatgagcttgtcaacatggagcttcagtag
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| Protein seq | MEHVFAVDEIPDPLWAPPPPVQPAAAAGVDDVGAVSGGGLLERCPSGWNLERFLEELDGVPAPAASPDGAAIYPSPMPAAAAEAAARWSRGYGDREAVGVMPMPAAALPAAPASAAMDPVEYNAMLKRKLDEDLATVAMWRASGAIHSESPLGNKTSLSIVGSILSSQKCIEGNGILVQTKLSPGPNGGSGPYVNQNTDAHAKQATSGSSREPSPSEDDDMEGDAEAMGNMILDEEDKVKKRKESNRESARRSRSRKAARLKDLEEQVSLLRVENSSLLRRLADANQKYSAAAIDNRVLMADIEALRAKVRMAEESVKMVTGARQLHQAIPDMQSPLNVNSDASVPIQNNNPMNYFSNANNAGVNSFMHQVSPAFQIVDSVEKIDPTDPVQLQQQQMASLQHLQNRACGGGASSNEYTAWGSSLMDANELVNMELQ
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.000000 | 0.000000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0182000 | RBH | 0.0 | 0.0 | 3.159420 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g08420 | RBH | 0.0 | 0.0 | 0.815125 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0182000 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0005150 | RBH | 0.0 | 0.0 | 0.751401 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0005110 | RBH | 0.0 | 0.0 | 1.423161 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0005020 | RBH | 0.0 | 0.0 | 0.370716 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0004950 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0005070 | RBH | 0.0 | 0.0 | 2.586349 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0072700 | RBH | 0.043086 | 0.3736515 | 0.397666 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0005590 | RBH | 0.0 | 0.0 | 0.714159 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0075800 | RBH | 0.4506035 | 0.5425665 | 0.8423165 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0005050 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0005060 | RBH | 0.0 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0005100 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0005180 | RBH | 0.0 | 0.000000 | 0.321463 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0005040 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G005230 | RBH | 0.0 | 0.0 | 0.397361 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0037310 | RBH | 0.919763 | 24.296144 | 3.854222 |
