Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_07g0001120 | OGI:07002610 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr07:883267-885173 | ||||||||
| Gene Symbol | SAC1, OsSAC1 | ||||||||||
| DNA seq | atggagcAacatgtggaacggaatgcatcaagcgcacacCAactgagagaTgtgtggctgagcattggagggacggtggtccgcattgaggtgatggcaatggtggccatcTttctcaCcttctacgccgtcaccttcggatcctgccgccgctggtctagccgatggatcatccaaaaggttttcctggctgcgaatgcgctgtctgtgtCcctaggaacatacagcatagggctgatgcagtcatcgctggtgaagagcaagatgTAccctgtgtggTcggtgtcattgcttgccctctttgctagcattgactccatcaacacattcggCctcgactatagtggccaaTtcctgaagctgttgtatcagctcttcctctactttgggtatgTgcttgtgatcagcatctccggcaataccaataatggcatggtggccgctgcgattggcatgctttgcagcgtcaccctatgtaagggattCcataggctgatggCctatgtgctcccgaccaggctgcggagcatgaacaaagagattgcagatcgtatggaagtggtgaaggggggggggcaaactttaacgcggccatcatgcaagggtatcaataCctggttgataagactTAatatccatccataaCcctggaagaattgtggaagcctgacaatggcatggacaaactaggaacagatgctgatgcctacaaggacatatgcctctctttctccctctgtCAactgctacagcgacgcttctttggttttagttgtgctgagtctgaccggccagagaCccgtagctttgtgttggaaggcttgcttcaacctgtagcttcgagtagttcatcatcacaaggtactggtggttctcgtggtaactacgagagggccttcaaggtgattgaggttgagctagccttcatgtacgactacatctacagcagcaacgccttcgtccattactatgaagctggagcttgcaccgcctgggcaatagcttcaatcctgaccacatgttggcagttgctCccaggcccttgttgggtgatatactccgccctctacaagTtgtttggcctgcagtacattcaacaggtgctgacagacatgttgggcattagcactgcaagctccattcagctgcccattgaggtgaagagtgccgtgaTtgatgccctcgttgggatcctcatgcccaggcccaaccatgacagtgtcgtgttgtccagtggatcaacatcgctagccaagaatggcttgcaggacaagttcataaggcagtacgcttcgacaagttaccatggcggtagagctagtaccattatccccgaatcaaagggcAatcaagccagcatcatcttgacctggcacgctgcgacaggttgctacgacaaagactatgagcaaaGgaagaagatGAaggctactacagaatcgccgctacagcacaggcagtatcgtgttgtggccaccgctctatccaagtactgcatgtacttggtagcttatgtgcctcagctgctgCccgggcagcagtcctacacaacatctgtctacaacgaTtttgtgcgctcgccgtcctacatcttgcagagtggtacccagctgaaagatgagCTctgcgaggcggtggtggaagatgaactgaggtggAaggtgctagctgaTttctgggtcgagatgttgctctaCctcgcgccttctgacaatgtcacggctcacatcgagcaactcgcacaaggtggagagttcatcacccatctctgggCTctCctcttccacgccggcatCctacaaggaggaggaggagccagctgcagccgggacagtgtgacgaataaccacttaaTTATtaattatcttgtgtttagcagtttgtttccatactttttatgtttgtag
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| CDS seq | atggagcAacatgtggaacggaatgcatcaagcgcacacCAactgagagaTgtgtggctgagcattggagggacggtggtccgcattgaggtgatggcaatggtggccatcTttctcaCcttctacgccgtcaccttcggatcctgccgccgctggtctagccgatggatcatccaaaaggttttcctggctgcgaatgcgctgtctgtgtCcctaggaacatacagcatagggctgatgcagtcatcgctggtgaagagcaagatgTAccctgtgtggTcggtgtcattgcttgccctctttgctagcattgactccatcaacacattcggCctcgactatagtggccaaTtcctgaagctgttgtatcagctcttcctctactttgggtatgTgcttgtgatcagcatctccggcaataccaataatggcatggtggccgctgcgattggcatgctttgcagcgtcaccctatgtaagggattCcataggctgatggCctatgtgctcccgaccaggctgcggagcatgaacaaagagattgcagatcaattgtggaagcctgacaatggcatggacaaactaggaacagatgctgatgcctacaaggacatatgcctctctttctccctctgtCAactgctacagcgacgcttctttggttttagttgtgctgagtctgaccggccagagaCccgtagctttgtgttggaaggcttgcttcaacctgtagcttcgagtagttcatcatcacaaggtactggtggttctcgtggtaactacgagagggccttcaaggtgattgaggttgagctagccttcatgtacgactacatctacagcagcaacgccttcgtccattactatgaagctggagcttgcaccgcctgggcaatagcttcaatcctgaccacatgttggcagttgctCccaggcccttgttgggtgatatactccgccctctacaagTtgtttggcctgcagtacattcaacaggtgctgacagacatgttgggcattagcactgcaagctccattcagctgcccattgaggtgaagagtgccgtgaTtgatgccctcgttgggatcctcatgcccaggcccaaccatgacagtgtcgtgttgtccagtggatcaacatcgctagccaagaatggcttgcaggacaagttcataaggcagtacgcttcgacaagttaccatggcggtagagctagtaccattatccccgaatcaaagggcAatcaagccagcatcatcttgacctggcacgctgcgacaggttgctacgacaaagactatgagcaaaGgaagaagatGAaggctactacagaatcgccgctacagcacaggcagtatcgtgttgtggccaccgctctatccaagtactgcatgtacttggtagcttatgtgcctcagctgctgCccgggcagcagtcctacacaacatctgtctacaacgaTtttgtgcgctcgccgtcctacatcttgcagagtggtacccagctgaaagatgagCTctgcgaggcggtggtggaagatgaactgaggtggAaggtgctagctgaTttctgggtcgagatgttgctctaCctcgcgccttctgacaatgtcacggctcacatcgagcaactcgcacaaggtggagagttcatcacccatctctgggCTctCctcttccacgccggcatCctacaaggaggaggaggagccagctgcagccgggacagtgtgacgaataaccacttaaTTATtaattatcttgtgtttagcagtttgtttccatactttttatgtttgtag
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| Protein seq | MEQHVERNASSAHQLRDVWLSIGGTVVRIEVMAMVAIFLTFYAVTFGSCRRWSSRWIIQKVFLAANALSVSLGTYSIGLMQSSLVKSKMYPVWSVSLLALFASIDSINTFGLDYSGQFLKLLYQLFLYFGYVLVISISGNTNNGMVAAAIGMLCSVTLCKGFHRLMAYVLPTRLRSMNKEIADQLWKPDNGMDKLGTDADAYKDICLSFSLCQLLQRRFFGFSCAESDRPETRSFVLEGLLQPVASSSSSSQGTGGSRGNYERAFKVIEVELAFMYDYIYSSNAFVHYYEAGACTAWAIASILTTCWQLLPGPCWVIYSALYKLFGLQYIQQVLTDMLGISTASSIQLPIEVKSAVIDALVGILMPRPNHDSVVLSSGSTSLAKNGLQDKFIRQYASTSYHGGRASTIIPESKGNQASIILTWHAATGCYDKDYEQRKKMKATTESPLQHRQYRVVATALSKYCMYLVAYVPQLLPGQQSYTTSVYNDFVRSPSYILQSGTQLKDELCEAVVEDELRWKVLADFWVEMLLYLAPSDNVTAHIEQLAQGGEFITHLWALLFHAGILQGGGGASCSRDSVTNNHLIINYLVFSSLFPYFLCL |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_07g0001120 | OsNaBo_07g0001120.01 | Chr07 | 883267 | 885173 | + | NAM | ||
| CDS seq | atggagcAacatgtggaacggaatgcatcaagcgcacacCAactgagagaTgtgtggctgagcattggagggacggtggtccgcattgaggtgatggcaatggtggccatcTttctcaCcttctacgccgtcaccttcggatcctgccgccgctggtctagccgatggatcatccaaaaggttttcctggctgcgaatgcgctgtctgtgtCcctaggaacatacagcatagggctgatgcagtcatcgctggtgaagagcaagatgTAccctgtgtggTcggtgtcattgcttgccctctttgctagcattgactccatcaacacattcggCctcgactatagtggccaaTtcctgaagctgttgtatcagctcttcctctactttgggtatgTgcttgtgatcagcatctccggcaataccaataatggcatggtggccgctgcgattggcatgctttgcagcgtcaccctatgtaagggattCcataggctgatggCctatgtgctcccgaccaggctgcggagcatgaacaaagagattgcagatcaattgtggaagcctgacaatggcatggacaaactaggaacagatgctgatgcctacaaggacatatgcctctctttctccctctgtCAactgctacagcgacgcttctttggttttagttgtgctgagtctgaccggccagagaCccgtagctttgtgttggaaggcttgcttcaacctgtagcttcgagtagttcatcatcacaaggtactggtggttctcgtggtaactacgagagggccttcaaggtgattgaggttgagctagccttcatgtacgactacatctacagcagcaacgccttcgtccattactatgaagctggagcttgcaccgcctgggcaatagcttcaatcctgaccacatgttggcagttgctCccaggcccttgttgggtgatatactccgccctctacaagTtgtttggcctgcagtacattcaacaggtgctgacagacatgttgggcattagcactgcaagctccattcagctgcccattgaggtgaagagtgccgtgaTtgatgccctcgttgggatcctcatgcccaggcccaaccatgacagtgtcgtgttgtccagtggatcaacatcgctagccaagaatggcttgcaggacaagttcataaggcagtacgcttcgacaagttaccatggcggtagagctagtaccattatccccgaatcaaagggcAatcaagccagcatcatcttgacctggcacgctgcgacaggttgctacgacaaagactatgagcaaaGgaagaagatGAaggctactacagaatcgccgctacagcacaggcagtatcgtgttgtggccaccgctctatccaagtactgcatgtacttggtagcttatgtgcctcagctgctgCccgggcagcagtcctacacaacatctgtctacaacgaTtttgtgcgctcgccgtcctacatcttgcagagtggtacccagctgaaagatgagCTctgcgaggcggtggtggaagatgaactgaggtggAaggtgctagctgaTttctgggtcgagatgttgctctaCctcgcgccttctgacaatgtcacggctcacatcgagcaactcgcacaaggtggagagttcatcacccatctctgggCTctCctcttccacgccggcatCctacaaggaggaggaggagccagctgcagccgggacagtgtgacgaataaccacttaaTTATtaattatcttgtgtttagcagtttgtttccatactttttatgtttgtag
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| Protein seq | MEQHVERNASSAHQLRDVWLSIGGTVVRIEVMAMVAIFLTFYAVTFGSCRRWSSRWIIQKVFLAANALSVSLGTYSIGLMQSSLVKSKMYPVWSVSLLALFASIDSINTFGLDYSGQFLKLLYQLFLYFGYVLVISISGNTNNGMVAAAIGMLCSVTLCKGFHRLMAYVLPTRLRSMNKEIADQLWKPDNGMDKLGTDADAYKDICLSFSLCQLLQRRFFGFSCAESDRPETRSFVLEGLLQPVASSSSSSQGTGGSRGNYERAFKVIEVELAFMYDYIYSSNAFVHYYEAGACTAWAIASILTTCWQLLPGPCWVIYSALYKLFGLQYIQQVLTDMLGISTASSIQLPIEVKSAVIDALVGILMPRPNHDSVVLSSGSTSLAKNGLQDKFIRQYASTSYHGGRASTIIPESKGNQASIILTWHAATGCYDKDYEQRKKMKATTESPLQHRQYRVVATALSKYCMYLVAYVPQLLPGQQSYTTSVYNDFVRSPSYILQSGTQLKDELCEAVVEDELRWKVLADFWVEMLLYLAPSDNVTAHIEQLAQGGEFITHLWALLFHAGILQGGGGASCSRDSVTNNHLIINYLVFSSLFPYFLCL
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0115720 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g02520 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0116300 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0001080 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0001110 | RBH | 0.054343 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0001040 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0001050 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0001060 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0015300 | RBH | 0.0736505 | 0 | 0.018478 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0001060 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0012900 | RBH | 0 | 0 | 0.1117745 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0001110 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0001140 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0001130 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0001070 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G001110 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0001110 | RBH | 0.0 | 2.111675 | 0.0 |
