Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_06g0028050 | OGI:06083190 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr06:30518933-30526917 | ||||||||
| Gene Symbol | ARF7A, OsARF7a, OsARF19, ARF19, OsARF7 | ||||||||||
| DNA seq | gatgggtGtagctgtagctgacctcctTCcAcctctcgcacacgCacaataACcaaccacttttaATtccccgaggagagcagagagctcgaagcaaacaagaatcacaggagcgagcacggcaggctgcagcatcaccaccaccctactctctctctctagctagggttgcgctgcttcggtctcggtcTtggcgccgcctgcctcgcccttcttgctcgcccctgctcccttgtccctctcgtgtcggggcgacggacggacatcctcacccgcgcgcacgtacgggtgatcgatcgattgattcctgctccgacgaagtcggcggcggcgccggtgacctcgccggacatgcgcggggcccgctgaggtcTttgttgccggcgaaaggggtggagtgattgactcggtcggtgtctgcctgtctggtctgaggtcatgatgaagcaggcgcagcagcagccgccgccgccaccggcgagctctgcggcgacgacgaccaccgcgatggcagccgctgcggcggcggcggtggtggggagcgggtgcgaaggtaggacgagttcttgctctgcTtgctgcttccaatggcggttcgggatggagcagtggttgccttgccgtgttcttgtttctgcaatctggtccctgttttatcgcgttattatttcgccacaaaattaggcaaataaatcctttcttattcttcttggattttggattactgcattttttttctctgcatttttgttcctgtgatttctggcgagcgtcgcagcaTttactgttccacatttatgccccctcaaagtttgagtaatcgcaacataggagtacgagtagctgctactgcagtgctaagccatgtgcagagattaattggtttgtgtaaaaacctggtcgtttagggggcgaactgcaaattacacacaagctcgccggcggcgtagggcaaaatgcatttggtcatttggatcatccagcttacggcgagattattaggGAaaaaagtttttactgttttgtttGgttactgattggccgtggtgttttgcaggggagaagacgaaggcgccggcgatcaactcggagctgtggcacgcctgcgcGgggccgctggtgtcgctgccgccggcgggcagcctcgtcgtctacttcccccagggccacagcgagcaggtgacttcgaagttctattgatttttttttcatctttgtttcattttcatagccatggatggcctcgTtttgagaccctttttaattgacTttttgttcttatgattctagTttttttttggtttgctttttttaaaaataagaattctaattcgtctagttctgaatgttgatgattcttgcacgaataagttcacaacttgctgtccttttatgagttcttgagaggtggaatgcTtttttttttggtttggtgttccattttgttcagtagtggtggcagttataattatatgatgggaatAATGggatgtgtttctagggccAaaatgatataTtttgttcacatctttatttctgggaatgtttcacttatcgcctaggagtatatgtctcctggaatcttttctgaattcatgtatcttctgttgccgAaaagtagtaGtattatcttttcatgaattGttttttttggttctttgatattacagccatcattgatctatttggtaatttgattttctatgttttatacgatgtgggagatctcgattggtctgtttgttcattgtactttattttgtttcattagctaccaatttttagcttatggccaaagtggttggaagtattGggcatactggaCccccttcttttatgggTttatggtgtgtggcaccattctcttgctctgtcgtttggtagatgaagcagccaagcagcttcgaTttttttttcgcatttaatggtaattacattcagtagcttcttttgcaactttcttggctttggtgttggggctaccttattttgagcaagtttgaagtatggggtgatgaactgTttggatttggAaaagattctttatctaaaagctagtgctggaaggtgcctaaTtctgtaTtggtttttcctatcccttttgtgatgatgagAaaaagggaactttttTAGtaaccgtgtgatggctatgtcctcatagcacatgccgatgtgaggcaagagaaagTtttgctgtggcttAattaatataaaacgaatttatgctttaaacttaaattcagcctaatgttggtcatgcttttttgtgtggggaaattgctgtggttgaagtagggaacattttgtaaaagggagaagagttacatagagaatttaaaataaaacTtaagcAacataaaaataatatttgtAaaaattcggttgccattttttcctgtgattttcatcgtgatcgAgcaccctttggccTttgtttccctgtgactgatgaTtttttgtttgtaaggtcccagtatcaacagaTttatatctgcatccttctgattccagtgtgaaaattgttgcttagagccacagatttaagtatctttcatattgcaggttgcagcctctatgcaaaaggatgttgatgcacatgttccaagctacccAaatctgccttcaaagttgatttgccttctgcATaacgtcactttacatgtaatctacagacgtgagatgttattatagtttCtttttacctttaaccatctatgctgaaagtatggtccatctatatttcttaggcggacccagaaacagatgaagtgtatgcacAaatgactcttcagccagttacttcagtaagcatctgatgcccttgcagatccccaacaaattttcatcgatttcccttttgttcatggattgtaacccaCcttttgtgtttcaattgatTGtgtattgaaaagtatgggaaggaggccctgcagttatcagagcttgcactcaaacaagcgagaCcacagacagaattcttttgcaagacactgactgcaagtgatacaagtactcatggaggcttctctgtgcctcgtcgagctgcagaaaagatatttcctccactggtatgcaaagatcagagtcatatgccattgTttacttcaTtttctgcatctttattattaaatcactggtgcttgctgtaggacttctcaatgcaaccacctgcacaagaactacaggccagggatttgcatgataatgtgtggacattccgtcacatatatcGgggtaagcaaacaatagcaacgataaaaataaagaaaATttatagtataacaaatgaaaaattctgctgttgacatcctactttatagttgttgatacttaatatttggcatgattggctgaaattgtgtgcatatgcatgttttgttctttacgcatggcagttcctgtattcaaacttcaaattattgtgtttttatgtaatatatgtggctcgatatgtattttgtccagacaaaatatttaatcgcccatgtgttttgatataaacaggtcagccaaaaaggcatctgcttaccactggctggagtctatttgtaagtggcaagaggttaTttgctggagattctgtcaTttttgtcaggtatgctacagcttatatgctatatctttaaagtttgaactaaatgatgagaacaagagatacatgatgttttcttgTtttttgtggttattcacatcgaTttaacggtggtcttctttcTttttcctttttattttttagggatgaaaagcagcaacttctattaggaatcaggcgtgctaaccgacagccaactaacatatcatcatctgtcctttcaagtgacagcatgcacatagggattcttgctgctgcagcccatgctgctgccaacaatagtccatttaccatcTtttataaccctaggtcagttctgtacTaaagtatgttttgataattctctagtagtaactactggagagctgttgaaatgatggtatgcaaattccgtatttcagggccagtcctactgaaTttgttatcccatttgctaagtatcagaaggcagtctatggtaatcAaatatctttagggatgcgctttcgcatgatgtttgagactgaggaattaggaacacgaaggtacTtttttctcacttttccataaatggaaataattgtggactgaattgccatattatatgattatacatgtcaatgacAaagctgggaatgattcttaattttctttttaaattttttgTtgttgttttcttgcccttattgcagatacatGggaacaataactggcataagtgatctagatccagtaagatggaaaaactcgcagtggcgcaacttacaggtttgttctctggttaattttggcagcactataacctagtaTttcttgtgcccaTtttctgctgctgatacaatatattttgtgTtttttcattcttgaacaggttggttgggatgaatccgcagccggtgaaaggcgaaatagggtttctatctgggagattgaaCcggttgctgctccatttttcatatgtcctccaccattttttggtgcgaagcggcccaggcaattaggtgagctctcatgttacattgccattacttcttttatAttctttaactgctcttgaatccagttattgatccaggagaataccccttagtcatctgttatgtctagctactagcttggaaaatatacctgcaaccaagctttacctttgagatgacaatctggataacataccttttgagttgtacgcacccaaCtgatttgagctaattatcgaattctagtggtgttgtgaattcaaatagatgaattgtttcactaaactgcttgtatgtatgcttaacttttgatccctaccatgtaattacagatgacgagtcctcggaaatggagaatctcttaaagagggctatgCcttggcttggtgaggaAATatgcataaaggatcctcagactcagaacaccataatgcctgggctgagcttggttcagtggatgaacatgaacatgcaacagagctcctcatttgcgaatacagccatgcagtctgagtaccttcgatcattgagcAaccccaacatgcaaaatcttggtgccgccgatctctctaggcaattatgcctgcagaaccagcttcttcaacagaacaatatacagtttaatactcccaaactttctcagcaaatgcagccagtcaatgagTtagcaaaggcaggcattccgttgaatcagcttggtgtgagcaccaaacctcaggaacagattcatgatgctagcaaccttcagaggcaacaaccttccatgaaccatatgcttcctttgagccaagctcaaaccaatcttggccaagctcaggtccttgTccaaaatcaaatgcaacagcaacatgcatcttcaactcaaGgtcaacaaccagctaccagccagcccttgcttctgccccagcagcagcAacagcagcagcagcagcaacAacagcagcaacagcaacaacaacaaaaattgctacaacagcagcagcaacagcttttgctccagcaacagcagcaattgagtaagatgcctgcacagttgtcaagtctggcgaatcagcagtttcagctaactgatcaacagcttcagctgcaactgttacaaaaactacagcaacaacagcagtcattgctttcacaacctgcagtcacccttgcacaattacctctgatccaagaacagcagaagttacttctggatatgcaacagcagctgtcaaactcccaaacactttccCAAaaacaaatgatgcctcaacaaagtaccaaGgttccatcacagaacacAccattgccactgcctgtgcaacaagagccacaacagaagcttctacagaagcaagcgatgctagcagacacttcagaagctgccgttccgccgaccacatcagtcaatgtcatttcaacaactggtagccctttgatgacaactggtgctactcattctgtacttacagaagaaatcccttcttgttcaacatcaccatccacagctaatggcaatcaccttctacaaccaatacttGgtaggaacaaacattgtagcatgatcaacacagaaaaggttcctcagtctgctgctcctatgtcagttccAagctcccttgaagctgtcacagcaaccccgagaatgatgaaggattcaccaaagttgaaccataatgttaaacAaagtgtagtggcttcaaaattagcaaatgctgggactggttctcAaaattatgtgaacaatccacctCcaacggactatCtggaaactgcttcttctgcaacttcagtgtggctttcccagaatgatggacttctacatcAaaatttccctatgtccaaCttcaaccagccacagatgttcaaagatgctcctcctgatgctgaaattcatgctgctaatacaagtaacaatgcattgtttggaatcaatggtgatggtccgctgggCttccctatAGgactaggaacagatgatttcctgtcgaatggaattgatgctgccaagtacgagaaccatatctcaacagaaattgataatagctacagaattccgaaggatgcccagcaagaaataTCatcctcaatggtttcacagtcatttggtgcatcagatatggcatttaattcaattgattccacgatcaacgatggtggcTttttgaaccgGAgttcttggcctcctgccgctcccttaaagaggatgaggacattcaccaaggtcagtacctttctgtttctttatctgaagccaaccaacagcttcttctgtggtcagcgtgaatttTAAttttaagtaaacatgaagctttttatcTttttcattaccatggtaacaataaTttaaacttgcgatggtagtttcatctactggaaactaagtTCtcatttattaaccttcaaaacattgaagtaaatgtgcatatggataagccgaattgcatgataagtctgagtcagattctgttccgtgatgtgatgaggacagtatgagtagTtttttttttttggttgcctaggagatgttaagaagttttatggttgagtttctagccgaacataacttttatgtgcgaatctcacatgTttgtattaattatactctttaagataagagttttctaagtGtaacttcaggataaatctgttaaacgaagcaccgTttctttgttgtattatagcattttatggatgcatttgcagttgcatctttgcataaccTatatggtactgtaggtatataagcgaggagctgtaggccggtccattgacatgagtcagttctctggatatgatgaattaaagcatgctctggcacggatgttcagtatagaggggcaacttgaggaacggcagagaatcggttggaagctcgtttacaaggatcatgaagatgacatcctacttcttggcgacgactgagtgctactgtggatcatacagggAatttgtcggttgcgtgaaatgcattaggatcctttcacctcaagaagttcagcagatgagcttggagggttgtgatctcgggaacaacattcccccgaatcaggcctgcagcagctcagacggagggaatgcatggagggctcgctgcgatcagaactccggtaacccttccaatggttcatatgaacaattcgaatgaccaaattcaccagtccatattgtcatgctgcgccggtgtaagtagacaatcAccggagtgttgttgtagatgttatcagcttacatccgggagcgcaaatggctcggcggatcagtagtgTtttttttgtctatatgtgtagtttctcacatcaaaAGggAgtagggatggtaaatgaaacttaCctagagtttcttaaggttaggcgaaagatgattgtactgttggaaaggcagttctgtagtaaaatgattcttcttcagaggccattcttaagatctccatgatgaaatcaaaagttgaagatgtc
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| CDS seq | atgatgaagcaggcgcagcagcagccgccgccgccaccggcgagctctgcggcgacgacgaccaccgcgatggcagccgctgcggcggcggcggtggtggggagcgggtgcgaaggggagaagacgaaggcgccggcgatcaactcggagctgtggcacgcctgcgcGgggccgctggtgtcgctgccgccggcgggcagcctcgtcgtctacttcccccagggccacagcgagcaggttgcagcctctatgcaaaaggatgttgatgcacatgttccaagctacccAaatctgccttcaaagttgatttgccttctgcATaacgtcactttacatgcggacccagaaacagatgaagtgtatgcacAaatgactcttcagccagttacttcatatgggaaggaggccctgcagttatcagagcttgcactcaaacaagcgagaCcacagacagaattcttttgcaagacactgactgcaagtgatacaagtactcatggaggcttctctgtgcctcgtcgagctgcagaaaagatatttcctccactggacttctcaatgcaaccacctgcacaagaactacaggccagggatttgcatgataatgtgtggacattccgtcacatatatcGgggtcagccaaaaaggcatctgcttaccactggctggagtctatttgtaagtggcaagaggttaTttgctggagattctgtcaTttttgtcagggatgaaaagcagcaacttctattaggaatcaggcgtgctaaccgacagccaactaacatatcatcatctgtcctttcaagtgacagcatgcacatagggattcttgctgctgcagcccatgctgctgccaacaatagtccatttaccatcTtttataaccctagggccagtcctactgaaTttgttatcccatttgctaagtatcagaaggcagtctatggtaatcAaatatctttagggatgcgctttcgcatgatgtttgagactgaggaattaggaacacgaagatacatGggaacaataactggcataagtgatctagatccagtaagatggaaaaactcgcagtggcgcaacttacaggttggttgggatgaatccgcagccggtgaaaggcgaaatagggtttctatctgggagattgaaCcggttgctgctccatttttcatatgtcctccaccattttttggtgcgaagcggcccaggcaattagatgacgagtcctcggaaatggagaatctcttaaagagggctatgCcttggcttggtgaggaAATatgcataaaggatcctcagactcagaacaccataatgcctgggctgagcttggttcagtggatgaacatgaacatgcaacagagctcctcatttgcgaatacagccatgcagtctgagtaccttcgatcattgagcAaccccaacatgcaaaatcttggtgccgccgatctctctaggcaattatgcctgcagaaccagcttcttcaacagaacaatatacagtttaatactcccaaactttctcagcaaatgcagccagtcaatgagTtagcaaaggcaggcattccgttgaatcagcttggtgtgagcaccaaacctcaggaacagattcatgatgctagcaaccttcagaggcaacaaccttccatgaaccatatgcttcctttgagccaagctcaaaccaatcttggccaagctcaggtccttgTccaaaatcaaatgcaacagcaacatgcatcttcaactcaaGgtcaacaaccagctaccagccagcccttgcttctgccccagcagcagcAacagcagcagcagcagcaacAacagcagcaacagcaacaacaacaaaaattgctacaacagcagcagcaacagcttttgctccagcaacagcagcaattgagtaagatgcctgcacagttgtcaagtctggcgaatcagcagtttcagctaactgatcaacagcttcagctgcaactgttacaaaaactacagcaacaacagcagtcattgctttcacaacctgcagtcacccttgcacaattacctctgatccaagaacagcagaagttacttctggatatgcaacagcagctgtcaaactcccaaacactttccCAAaaacaaatgatgcctcaacaaagtaccaaGgttccatcacagaacacAccattgccactgcctgtgcaacaagagccacaacagaagcttctacagaagcaagcgatgctagcagacacttcagaagctgccgttccgccgaccacatcagtcaatgtcatttcaacaactggtagccctttgatgacaactggtgctactcattctgtacttacagaagaaatcccttcttgttcaacatcaccatccacagctaatggcaatcaccttctacaaccaatacttGgtaggaacaaacattgtagcatgatcaacacagaaaaggttcctcagtctgctgctcctatgtcagttccAagctcccttgaagctgtcacagcaaccccgagaatgatgaaggattcaccaaagttgaaccataatgttaaacAaagtgtagtggcttcaaaattagcaaatgctgggactggttctcAaaattatgtgaacaatccacctCcaacggactatCtggaaactgcttcttctgcaacttcagtgtggctttcccagaatgatggacttctacatcAaaatttccctatgtccaaCttcaaccagccacagatgttcaaagatgctcctcctgatgctgaaattcatgctgctaatacaagtaacaatgcattgtttggaatcaatggtgatggtccgctgggCttccctatAGgactaggaacagatgatttcctgtcgaatggaattgatgctgccaagtacgagaaccatatctcaacagaaattgataatagctacagaattccgaaggatgcccagcaagaaataTCatcctcaatggtttcacagtcatttggtgcatcagatatggcatttaattcaattgattccacgatcaacgatggtggcTttttgaaccgGAgttcttggcctcctgccgctcccttaaagaggatgaggacattcaccaaggtatataagcgaggagctgtaggccggtccattgacatgagtcagttctctggatatgatgaattaaagcatgctctggcacggatgttcagtatagaggggcaacttgaggaacggcagagaatcggttggaagctcgtttacaaggatcatgaagatgacatcctacttcttggcgacgactga
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| Protein seq | MMKQAQQQPPPPPASSAATTTTAMAAAAAAAVVGSGCEGEKTKAPAINSELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVPSYPNLPSKLICLLHNVTLHADPETDEVYAQMTLQPVTSYGKEALQLSELALKQARPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVIFVRDEKQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKAVYGNQISLGMRFRMMFETEELGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAAPFFICPPPFFGAKRPRQLDDESSEMENLLKRAMPWLGEEICIKDPQTQNTIMPGLSLVQWMNMNMQQSSSFANTAMQSEYLRSLSNPNMQNLGAADLSRQLCLQNQLLQQNNIQFNTPKLSQQMQPVNELAKAGIPLNQLGVSTKPQEQIHDASNLQRQQPSMNHMLPLSQAQTNLGQAQVLVQNQMQQQHASSTQGQQPATSQPLLLPQQQQQQQQQQQQQQQQQQQKLLQQQQQQLLLQQQQQLSKMPAQLSSLANQQFQLTDQQLQLQLLQKLQQQQQSLLSQPAVTLAQLPLIQEQQKLLLDMQQQLSNSQTLSQKQMMPQQSTKVPSQNTPLPLPVQQEPQQKLLQKQAMLADTSEAAVPPTTSVNVISTTGSPLMTTGATHSVLTEEIPSCSTSPSTANGNHLLQPILGRNKHCSMINTEKVPQSAAPMSVPSSLEAVTATPRMMKDSPKLNHNVKQSVVASKLANAGTGSQNYVNNPPPTDYLETASSATSVWLSQNDGLLHQNFPMSNFNQPQMFKDAPPDAEIHAANTSNNALFGINGDGPLGFPIGLGTDDFLSNGIDAAKYENHISTEIDNSYRIPKDAQQEISSSMVSQSFGASDMAFNSIDSTINDGGFLNRSSWPPAAPLKRMRTFTKVYKRGAVGRSIDMSQFSGYDELKHALARMFSIEGQLEERQRIGWKLVYKDHEDDILLLGDD |
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| Function | Auxin response factor 19 [UniProtKB/Swiss-Prot:Q0D9R7] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_06g0028050 | OsNaBo_06g0028050.01 | Chr06 | 30518933 | 30526917 | + | NAM | ||
| CDS seq | atgatgaagcaggcgcagcagcagccgccgccgccaccggcgagctctgcggcgacgacgaccaccgcgatggcagccgctgcggcggcggcggtggtggggagcgggtgcgaaggggagaagacgaaggcgccggcgatcaactcggagctgtggcacgcctgcgcGgggccgctggtgtcgctgccgccggcgggcagcctcgtcgtctacttcccccagggccacagcgagcaggttgcagcctctatgcaaaaggatgttgatgcacatgttccaagctacccAaatctgccttcaaagttgatttgccttctgcATaacgtcactttacatgcggacccagaaacagatgaagtgtatgcacAaatgactcttcagccagttacttcatatgggaaggaggccctgcagttatcagagcttgcactcaaacaagcgagaCcacagacagaattcttttgcaagacactgactgcaagtgatacaagtactcatggaggcttctctgtgcctcgtcgagctgcagaaaagatatttcctccactggacttctcaatgcaaccacctgcacaagaactacaggccagggatttgcatgataatgtgtggacattccgtcacatatatcGgggtcagccaaaaaggcatctgcttaccactggctggagtctatttgtaagtggcaagaggttaTttgctggagattctgtcaTttttgtcagggatgaaaagcagcaacttctattaggaatcaggcgtgctaaccgacagccaactaacatatcatcatctgtcctttcaagtgacagcatgcacatagggattcttgctgctgcagcccatgctgctgccaacaatagtccatttaccatcTtttataaccctagggccagtcctactgaaTttgttatcccatttgctaagtatcagaaggcagtctatggtaatcAaatatctttagggatgcgctttcgcatgatgtttgagactgaggaattaggaacacgaagatacatGggaacaataactggcataagtgatctagatccagtaagatggaaaaactcgcagtggcgcaacttacaggttggttgggatgaatccgcagccggtgaaaggcgaaatagggtttctatctgggagattgaaCcggttgctgctccatttttcatatgtcctccaccattttttggtgcgaagcggcccaggcaattagatgacgagtcctcggaaatggagaatctcttaaagagggctatgCcttggcttggtgaggaAATatgcataaaggatcctcagactcagaacaccataatgcctgggctgagcttggttcagtggatgaacatgaacatgcaacagagctcctcatttgcgaatacagccatgcagtctgagtaccttcgatcattgagcAaccccaacatgcaaaatcttggtgccgccgatctctctaggcaattatgcctgcagaaccagcttcttcaacagaacaatatacagtttaatactcccaaactttctcagcaaatgcagccagtcaatgagTtagcaaaggcaggcattccgttgaatcagcttggtgtgagcaccaaacctcaggaacagattcatgatgctagcaaccttcagaggcaacaaccttccatgaaccatatgcttcctttgagccaagctcaaaccaatcttggccaagctcaggtccttgTccaaaatcaaatgcaacagcaacatgcatcttcaactcaaGgtcaacaaccagctaccagccagcccttgcttctgccccagcagcagcAacagcagcagcagcagcaacAacagcagcaacagcaacaacaacaaaaattgctacaacagcagcagcaacagcttttgctccagcaacagcagcaattgagtaagatgcctgcacagttgtcaagtctggcgaatcagcagtttcagctaactgatcaacagcttcagctgcaactgttacaaaaactacagcaacaacagcagtcattgctttcacaacctgcagtcacccttgcacaattacctctgatccaagaacagcagaagttacttctggatatgcaacagcagctgtcaaactcccaaacactttccCAAaaacaaatgatgcctcaacaaagtaccaaGgttccatcacagaacacAccattgccactgcctgtgcaacaagagccacaacagaagcttctacagaagcaagcgatgctagcagacacttcagaagctgccgttccgccgaccacatcagtcaatgtcatttcaacaactggtagccctttgatgacaactggtgctactcattctgtacttacagaagaaatcccttcttgttcaacatcaccatccacagctaatggcaatcaccttctacaaccaatacttGgtaggaacaaacattgtagcatgatcaacacagaaaaggttcctcagtctgctgctcctatgtcagttccAagctcccttgaagctgtcacagcaaccccgagaatgatgaaggattcaccaaagttgaaccataatgttaaacAaagtgtagtggcttcaaaattagcaaatgctgggactggttctcAaaattatgtgaacaatccacctCcaacggactatCtggaaactgcttcttctgcaacttcagtgtggctttcccagaatgatggacttctacatcAaaatttccctatgtccaaCttcaaccagccacagatgttcaaagatgctcctcctgatgctgaaattcatgctgctaatacaagtaacaatgcattgtttggaatcaatggtgatggtccgctgggCttccctatAGgactaggaacagatgatttcctgtcgaatggaattgatgctgccaagtacgagaaccatatctcaacagaaattgataatagctacagaattccgaaggatgcccagcaagaaataTCatcctcaatggtttcacagtcatttggtgcatcagatatggcatttaattcaattgattccacgatcaacgatggtggcTttttgaaccgGAgttcttggcctcctgccgctcccttaaagaggatgaggacattcaccaaggtatataagcgaggagctgtaggccggtccattgacatgagtcagttctctggatatgatgaattaaagcatgctctggcacggatgttcagtatagaggggcaacttgaggaacggcagagaatcggttggaagctcgtttacaaggatcatgaagatgacatcctacttcttggcgacgactga
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| Protein seq | MMKQAQQQPPPPPASSAATTTTAMAAAAAAAVVGSGCEGEKTKAPAINSELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVPSYPNLPSKLICLLHNVTLHADPETDEVYAQMTLQPVTSYGKEALQLSELALKQARPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVIFVRDEKQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKAVYGNQISLGMRFRMMFETEELGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAAPFFICPPPFFGAKRPRQLDDESSEMENLLKRAMPWLGEEICIKDPQTQNTIMPGLSLVQWMNMNMQQSSSFANTAMQSEYLRSLSNPNMQNLGAADLSRQLCLQNQLLQQNNIQFNTPKLSQQMQPVNELAKAGIPLNQLGVSTKPQEQIHDASNLQRQQPSMNHMLPLSQAQTNLGQAQVLVQNQMQQQHASSTQGQQPATSQPLLLPQQQQQQQQQQQQQQQQQQQKLLQQQQQQLLLQQQQQLSKMPAQLSSLANQQFQLTDQQLQLQLLQKLQQQQQSLLSQPAVTLAQLPLIQEQQKLLLDMQQQLSNSQTLSQKQMMPQQSTKVPSQNTPLPLPVQQEPQQKLLQKQAMLADTSEAAVPPTTSVNVISTTGSPLMTTGATHSVLTEEIPSCSTSPSTANGNHLLQPILGRNKHCSMINTEKVPQSAAPMSVPSSLEAVTATPRMMKDSPKLNHNVKQSVVASKLANAGTGSQNYVNNPPPTDYLETASSATSVWLSQNDGLLHQNFPMSNFNQPQMFKDAPPDAEIHAANTSNNALFGINGDGPLGFPIGLGTDDFLSNGIDAAKYENHISTEIDNSYRIPKDAQQEISSSMVSQSFGASDMAFNSIDSTINDGGFLNRSSWPPAAPLKRMRTFTKVYKRGAVGRSIDMSQFSGYDELKHALARMFSIEGQLEERQRIGWKLVYKDHEDDILLLGDD
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_06g0028050 | OsNaBo_06g0028050.02 | Chr06 | 30518942 | 30526875 | + | IsoSeq | ||
| CDS seq | atgatttcctgtcgaatggaattgatgctgccaagtacgagaaccatatctcaacagaaattgataatagctacagaattccgaaggatgcccagcaagaaataTCatcctcaatggtttcacagtcatttggtgcatcagatatggcatttaattcaattgattccacgatcaacgatggtggcT |
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| Protein seq | MISCRMELMLPSTRTISQQKLIIATEFRRMPSKKYHPQWFHSHLVHQIWHLIQLIPRSTMVA |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A5 | Chr06 | 30526381 | 30526406 | + | OsNaBo_06g0028050.01 | OsNaBo_06g0028050.01,OsNaBo_06g0028050.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.223426 | 26.504395 | 12.371028 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0702600 | RBH | 0.947886 | 1.344375 | 3.711626 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g48950 | RBH | 0.546698 | 0.843508 | 0.829984 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0702600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0028210 | RBH | 0.223463 | 27.466938 | 8.274524 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0028020 | RBH | 0.055016 | 6.916403 | 2.500865 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0028170 | RBH | 0.309531 | 36.419567 | 11.239363 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0027760 | RBH | 0.042026 | 0.795843 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0028250 | RBH | 0.500280 | 34.750278 | 19.741209 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0466500 | RBH | 4.5717285 | 20.228123 | 6.374656 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0027620 | RBH | 0.115220 | 2.587788 | 2.037877 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0450100 | RBH | 6.294196 | 14.3835405 | 27.8909175 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0028160 | RBH | 0.061640 | 0.201896 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0028210 | RBH | 0.198584 | 19.099743 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0027800 | RBH | 2.124339 | 43.722752 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0028460 | RBH | 0.256282 | 2.860697 | 2.091622 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0028080 | RBH | 0.203736 | 17.761419 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G027960 | RBH | 0.231062 | 7.759694 | 2.807471 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0003220 | RBH | 0.000000 | 6.169037 | 10.679874 |
