Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_06g0026340 | OGI:06079750 | 15/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr06:29265342-29267719 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ttaaagttgtcctgaaaacaaagcaactatgtaatgttaatactaccaaacaactggaatggttttcttaataaaaattttaatgtgatgattcgttgcagattattagaaagagttaaaatgtgacattcgcacaaacgtagatactgcatttctcacattatgaaattaaactgaagtaactattgggtttctttatttgaataaaagtcatgtgggttgctttttggggggtagctataaggtttctgccaatatataatttgagagatgcatgaacataacaagatatgtatcaaagcaagacaggttgcattgaaagaggatccgaaattctgaataacctgatgttgatgtatcagcatcattgccgtcaggggcatcatcaacgttaggaaatattgcatcaatatcaggacagacatcaacaaaaggaaatactgcattaatagcagcaacatcaatactattactggcagcctctttatcttcagtcatgcatgttagtaactggtcctgttaagattatagtatagactcagtactcagtaaagggagatcagatgtataactatacataaacaagaatctctagacttaacataccgatatgaaacacattgcgagcggtgagatggctacacgataatccataagagagatttcaagaaaataacgccacaggtctcggatttcagcacaagcctcattgaactgcaacataacaaagatggctgtcagtatgagtgaatttaacaaaacaatgttgaaacaaggccatgcaaaacagaagattctcaaacctcagagcttgaaatatctgtggggacattattcagctttagcttaatcttctcaaggataaaaactccatttctgcatttttcctctcgtatttgagaaaatggcttttcttcaatattatcagctgctcgaagaaacaagtacttgaaaatatcatccatccttttgaaatgtaagacataattctcctctgaatcttgacagattgttgcattgtccgagaaatgatcaccctgatatgtatcagagatcgattctggatcaaaaacttgccgcaggttcgtccagaaacccccttcgggatgcttgctgcgcatgtgttgcaagagcgaatcaatgtctgggatcttcttgccaacacaatagggacaaatccagaacctccatgacttgtttttcttgacaaagttgagtgcatcagatatggtctttgcagcttcatggtcatcttgatagaaagtaacaaagtgtaggtgcaaatacttgagtcccaccaatcgaaagctgtcctgcttctcgcttgccagtgagcaccagtaatctctacacaccaagacaagcttctgaagcaaacgtttgagctctgtgcggatataagatttcctatcctcaggcttctctccggggatagatccaggaggcacgtcctcctccctgggatcagtaggctcctccatacggattgcccggtcacactccacttccacagaacaatacttccccatgacaaaccagagcttcgcgcggaacatggcaatctcaagcgaattgctgaactcttcaaccaaattgttcaatgcgtcgaggatgctattcagaaacggcttcttgtcaatgtttgggtcgaggccgcgcgcgaaatccaagctgatctttgcgtgggtcaagtgcgcgcgcgccgagtagccgaatcgctcgacgagcgccttcttcgcttgcttcttcgccgtggccgcgccctcgcgcttggagatgtcgagcatgtcgacgacgacggcgggaatgatcttggcggacatgtgggacatgatatggtgagagtggaagagcgcggcctccctcgctttcgccaacctgtccatggtggtgctcagggtgcggtcgaggtcgaacgcgacgttgttctccgccgggtcggtgggggaggagatggctagggcacgcatgatctcgcgatccggctcgtagtccttggcgctggcgaccttcgccatggcgaagccggtggcgatctggacgcagttgggggcgagacgcttggcctgcgcgtagaggtcgcgcgcgtagacgaggtgcatcaccgaagcctggccgtcggagccgtcgcgggcggagcgggtggaggcgttctggtggaggccggcggcgaggtggagcacgacggcggactccgggtgcttggccgcgagctcgtccgcgcgcgcgatcgcctcgtcgtggcggccctcgcgatccagccgcatcgcctccacggcctccttgcgcagggggctcgcctcgaggaggcaccgccgctcctcctcctcgcgcgccgcctcggcctccttccgctgtttccctctgcccctgcccaT
More
|
||||||||||
| CDS seq | Atgggcaggggcagagggaaacagcggaaggaggccgaggcggcgcgcgaggaggaggagcggcggtgcctcctcgaggcgagccccctgcgcaaggaggccgtggaggcgatgcggctggatcgcgagggccgccacgacgaggcgatcgcgcgcgcggacgagctcgcggccaagcacccggagtccgccgtcgtgctccacctcgccgccggcctccaccagaacgcctccacccgctccgcccgcgacggctccgacggccaggcttcggtgatgcacctcgtctacgcgcgcgacctctacgcgcaggccaagcgtctcgcccccaactgcgtccagatcgccaccggcttcgccatggcgaaggtcgccagcgccaaggactacgagccggatcgcgagatcatgcgtgccctagccatctcctcccccaccgacccggcggagaacaacgtcgcgttcgacctcgaccgcaccctgagcaccaccatggacaggttggcgaaagcgagggaggccgcgctcttccactctcaccatatcatgtcccacatgtccgccaagatcattcccgccgtcgtcgtcgacatgctcgacatctccaagcgcgagggcgcggccacggcgaagaagcaagcgaagaaggcgctcgtcgagcgattcggctactcggcgcgcgcgcacttgacccacgcaaagatcagcttggatttcgcgcgcggcctcgacccaaacattgacaagaagccgtttctgaatagcatcctcgacgcattgaacaatttggttgaagagttcagcaattcgcttgagattgccatgttccgcgcgaagctctggtttgtcatggggaagtattgttctgtggaagtggagtgtgaccgggcaatccgtatggaggagcctactgatcccagggaggaggacgtgcctcctggatctatccccggagagaagcctgaggataggaaatcttatatccgcacagagctcaaacgtttgcttcagaagcttgtcttggtgtgtagagattactggtgctcactggcaagcgagaagcaggacagctttcgattggtgggactcaagtatttgcacctacactttgttactttctatcaagatgaccatgaagctgcaaagaccatatctgatgcactcaactttgtcaagaaaaacaagtcatggaggttctggatttgtccctattgtgttggcaagaagatcccagacattgattcgctcttgcaacacatgcgcagcaagcatcccgaagggggtttctggacgaacctgcggcaagtttttgatccagaatcgatctctgatacatatcagggtgatcatttctcggacaatgcaacaatctgtcaagattcagaggagaattatgtcttacatttcaaaaggatggatgatattttcaagtacttgtttcttcgagcagctgataatattgaagaaaagccattttctcaaatacgagaggaaaaatgcagaaatggagtttttatccttgagaagattaagctaaagctgaataatgtccccacagatatttcaagctctgagttcaatgaggcttgtgctgaaatccgagacctgtggcgttattttcttgaaatctctcttatggattatcgtgtagccatctcaccgctcgcaatgtgtttcatatcggaccagttactaacatgcatgactgaagataaagaggctgccagtaatagtattgatgttgctgctattaatgcagtatttccttttgttgatgtctgtcctgatattgatgcaatatttcctaacgttgatgatgcccctgacggcaatgatgctgatacatcaacatcaggacaactttaa
More
|
||||||||||
| Protein seq | MGRGRGKQRKEAEAAREEEERRCLLEASPLRKEAVEAMRLDREGRHDEAIARADELAAKHPESAVVLHLAAGLHQNASTRSARDGSDGQASVMHLVYARDLYAQAKRLAPNCVQIATGFAMAKVASAKDYEPDREIMRALAISSPTDPAENNVAFDLDRTLSTTMDRLAKAREAALFHSHHIMSHMSAKIIPAVVVDMLDISKREGAATAKKQAKKALVERFGYSARAHLTHAKISLDFARGLDPNIDKKPFLNSILDALNNLVEEFSNSLEIAMFRAKLWFVMGKYCSVEVECDRAIRMEEPTDPREEDVPPGSIPGEKPEDRKSYIRTELKRLLQKLVLVCRDYWCSLASEKQDSFRLVGLKYLHLHFVTFYQDDHEAAKTISDALNFVKKNKSWRFWICPYCVGKKIPDIDSLLQHMRSKHPEGGFWTNLRQVFDPESISDTYQGDHFSDNATICQDSEENYVLHFKRMDDIFKYLFLRAADNIEEKPFSQIREEKCRNGVFILEKIKLKLNNVPTDISSSEFNEACAEIRDLWRYFLEISLMDYRVAISPLAMCFISDQLLTCMTEDKEAASNSIDVAAINAVFPFVDVCPDIDAIFPNVDDAPDGNDADTSTSGQL |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_06g0026340 | OsNaBo_06g0026340.01 | Chr06 | 29265342 | 29267719 | - | NAM | ||
| CDS seq | Atgggcaggggcagagggaaacagcggaaggaggccgaggcggcgcgcgaggaggaggagcggcggtgcctcctcgaggcgagccccctgcgcaaggaggccgtggaggcgatgcggctggatcgcgagggccgccacgacgaggcgatcgcgcgcgcggacgagctcgcggccaagcacccggagtccgccgtcgtgctccacctcgccgccggcctccaccagaacgcctccacccgctccgcccgcgacggctccgacggccaggcttcggtgatgcacctcgtctacgcgcgcgacctctacgcgcaggccaagcgtctcgcccccaactgcgtccagatcgccaccggcttcgccatggcgaaggtcgccagcgccaaggactacgagccggatcgcgagatcatgcgtgccctagccatctcctcccccaccgacccggcggagaacaacgtcgcgttcgacctcgaccgcaccctgagcaccaccatggacaggttggcgaaagcgagggaggccgcgctcttccactctcaccatatcatgtcccacatgtccgccaagatcattcccgccgtcgtcgtcgacatgctcgacatctccaagcgcgagggcgcggccacggcgaagaagcaagcgaagaaggcgctcgtcgagcgattcggctactcggcgcgcgcgcacttgacccacgcaaagatcagcttggatttcgcgcgcggcctcgacccaaacattgacaagaagccgtttctgaatagcatcctcgacgcattgaacaatttggttgaagagttcagcaattcgcttgagattgccatgttccgcgcgaagctctggtttgtcatggggaagtattgttctgtggaagtggagtgtgaccgggcaatccgtatggaggagcctactgatcccagggaggaggacgtgcctcctggatctatccccggagagaagcctgaggataggaaatcttatatccgcacagagctcaaacgtttgcttcagaagcttgtcttggtgtgtagagattactggtgctcactggcaagcgagaagcaggacagctttcgattggtgggactcaagtatttgcacctacactttgttactttctatcaagatgaccatgaagctgcaaagaccatatctgatgcactcaactttgtcaagaaaaacaagtcatggaggttctggatttgtccctattgtgttggcaagaagatcccagacattgattcgctcttgcaacacatgcgcagcaagcatcccgaagggggtttctggacgaacctgcggcaagtttttgatccagaatcgatctctgatacatatcagggtgatcatttctcggacaatgcaacaatctgtcaagattcagaggagaattatgtcttacatttcaaaaggatggatgatattttcaagtacttgtttcttcgagcagctgataatattgaagaaaagccattttctcaaatacgagaggaaaaatgcagaaatggagtttttatccttgagaagattaagctaaagctgaataatgtccccacagatatttcaagctctgagttcaatgaggcttgtgctgaaatccgagacctgtggcgttattttcttgaaatctctcttatggattatcgtgtagccatctcaccgctcgcaatgtgtttcatatcggaccagttactaacatgcatgactgaagataaagaggctgccagtaatagtattgatgttgctgctattaatgcagtatttccttttgttgatgtctgtcctgatattgatgcaatatttcctaacgttgatgatgcccctgacggcaatgatgctgatacatcaacatcaggacaactttaa
More
|
|||||||
| Protein seq | MGRGRGKQRKEAEAAREEEERRCLLEASPLRKEAVEAMRLDREGRHDEAIARADELAAKHPESAVVLHLAAGLHQNASTRSARDGSDGQASVMHLVYARDLYAQAKRLAPNCVQIATGFAMAKVASAKDYEPDREIMRALAISSPTDPAENNVAFDLDRTLSTTMDRLAKAREAALFHSHHIMSHMSAKIIPAVVVDMLDISKREGAATAKKQAKKALVERFGYSARAHLTHAKISLDFARGLDPNIDKKPFLNSILDALNNLVEEFSNSLEIAMFRAKLWFVMGKYCSVEVECDRAIRMEEPTDPREEDVPPGSIPGEKPEDRKSYIRTELKRLLQKLVLVCRDYWCSLASEKQDSFRLVGLKYLHLHFVTFYQDDHEAAKTISDALNFVKKNKSWRFWICPYCVGKKIPDIDSLLQHMRSKHPEGGFWTNLRQVFDPESISDTYQGDHFSDNATICQDSEENYVLHFKRMDDIFKYLFLRAADNIEEKPFSQIREEKCRNGVFILEKIKLKLNNVPTDISSSEFNEACAEIRDLWRYFLEISLMDYRVAISPLAMCFISDQLLTCMTEDKEAASNSIDVAAINAVFPFVDVCPDIDAIFPNVDDAPDGNDADTSTSGQL
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0681100 | RBH | 0.0 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g46730 | RBH | 0.0 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0681100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0026480 | RBH | 0.099449 | 1.406292 | 0.663383 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0026290 | RBH | 0.0 | 0.000000 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0026480 | RBH | 0.0 | 0.000000 | 0.704943 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0026090 | RBH | 0.000000 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0026570 | RBH | 0.000000 | 0.000000 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0445300 | RBH | 0.1266835 | 0.2636485 | 0.3587255 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0025970 | RBH | 0.0 | 0.058345 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0427200 | SBH | 0.7465775 | 0.897628 | 2.9640055 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0026420 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0026520 | RBH | 0.0 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0026140 | RBH | 0.0 | 4.249259 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0026780 | RBH | 0.000000 | 0.087254 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0026390 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G026290 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
