Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsNaBo_06g0015140 OGI:06028780 | 7/16 NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) Chr06:14949219-14950411
Gene Symbol -
DNA seq

atggataatggtaggaccatgatcatcaccagttcagaatttactcgtgaagacgcagcaaggatacccaagtatcagagaggaagaaataccttccgtggagcacgccagctaacccgacatctcatAaagtacggtccgcccagacccgaagatgatgaatCAggagaacggttttctgctgacAaagatgatgaaaatgatgatgcgacccttgatagtttcagggaaaGagagttgaagttcAaagcatgtgctagatgtgggatagtcggacatactgctagtttatacctccccacatgtcgcGgtggtgaatatacccattactcaaatacatgcctttgaggaagtcacatgtttcttgtgtgaaggaacagatcatgtgcctaaggactgtcagttgaacgcggtcatagctaagaccaagaagaacaagggacaaccgtgcaacccattcgtcaaccaatgacaatcgacaacagcggtcacatcctttgctcttcctccaactccagctccagtggaagccaaccatggaagaagcaacatcaccaggatgttcataagtctctgcttgttcccgtttcagctgccaagtgcataatcagaagcctgcaCcccgggaccaagcaagtcgattctgtcgcaactgtcataagccaggacatcgtttcagtgattctcctctcccaagagcagcaaaggcagttcgtcgtgattcacaagttaccagcactgcccatgacaccAatcgacacctgaatgtgcaacctccgcctcaacgaatcatcgtcaagggcaccatcagaggccgcattgttccaccggccatcgtttcaaactacagcaccagcaccaggagggtaggcaatgccagagaacaacagctcgctacggttacaaagaagtatgctccttcgtcagcacccgcagcaagtgtcgccagcaccaggtcccgactgttgtcagttctagcaatgccctcgtattgctccaattcggaggtccatcggcaaatcaccgcttggtaaccccacgggcaagaagatcctactattacagctgtcagacagttgccactccaccatcaaagatcagcaagcagggcaacgttcccggtgaagctcagctagtaggagttaagaacaagtcggtcaggttcgaacaatggaagcaatagcagttctaga

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CDS seq

atggataatggtaggaccatgatcatcaccagttcagaatttactcgtgaagacgcagcaaggatacccaagtatcagagaggaagaaataccttccgtggagcacgccagctaacccgacatctcatAaagtacggtccgcccagacccgaagatgatgaatCAggagaacgctccagtggaagccaaccatggaagaagcaacatcaccaggatgttcataagtctctgcttgttcccgtttcagctgccaagtgcataatcagaagcctgcaCcccgggaccaagcaagtcgattctgtcgcaactgtcataagccaggacatcgtttcagtgattctcctctcccaagagcagcaaaggcagttcgtcgtgattcacaagttaccagcactgcccatgacaccAatcgacacctga

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Protein seq

MDNGRTMIITSSEFTREDAARIPKYQRGRNTFRGARQLTRHLIKYGPPRPEDDESGERSSGSQPWKKQHHQDVHKSLLVPVSAAKCIIRSLHPGTKQVDSVATVISQDIVSVILLSQEQQRQFVVIHKLPALPMTPIDT

Function -

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsNaBo_06g0015140 OsNaBo_06g0015140.01 Chr06 14949219 14949983 + NAM
CDS seq

atggataatggtaggaccatgatcatcaccagttcagaatttactcgtgaagacgcagcaaggatacccaagtatcagagaggaagaaataccttccgtggagcacgccagctaacccgacatctcatAaagtacggtccgcccagacccgaagatgatgaatCAggagaacgctccagtggaagccaaccatggaagaagcaacatcaccaggatgttcataagtctctgcttgttcccgtttcagctgccaagtgcataatcagaagcctgcaCcccgggaccaagcaagtcgattctgtcgcaactgtcataagccaggacatcgtttcagtgattctcctctcccaagagcagcaaaggcagttcgtcgtgattcacaagttaccagcactgcccatgacaccAatcgacacctga

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Protein seq

MDNGRTMIITSSEFTREDAARIPKYQRGRNTFRGARQLTRHLIKYGPPRPEDDESGERSSGSQPWKKQHHQDVHKSLLVPVSAAKCIIRSLHPGTKQVDSVATVISQDIVSVILLSQEQQRQFVVIHKLPALPMTPIDT

Gene Transcript Chromosome Start End Strand Source
OsNaBo_06g0015140 OsNaBo_06g0015140.02 Chr06 14949984 14950411 + NAM
CDS seq

atgtgcaacctccgcctcaacgaatcatcgtcaagggcaccatcagaggccgcattgttccaccggccatcgtttcaaactacagcaccagcaccaggagggcaatgccagagaacaacagctcgctacggttacaaagaagtatgctccttcgtcagcacccgcagcaagtgtcgccagcaccaggtcccgactgttgtcagttctagcaatgccctcgtattgctccaattcggaggtccatcggcaaatcaccgcttggtaaccccacgggcaagaagatcctactattacagctgtcagacagttgccactccaccatcaaagatcagcaagcagggcaacgttcccggtgaagctcagctagtaggagttaagaacaagtcggtcaggttcgaacaatggaagcaatag

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Protein seq

MCNLRLNESSSRAPSEAALFHRPSFQTTAPAPGGQCQRTTARYGYKEVCSFVSTRSKCRQHQVPTVVSSSNALVLLQFGGPSANHRLVTPRARRSYYYSCQTVATPPSKISKQGNVPGEAQLVGVKNKSVRFEQWKQ

Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.0 0.0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) NA NA NA NA NA
Nipponbare | IRGSP 1.0 | MSU NA NA NA NA NA
Nipponbare | IRGSP 1.0 | RAP-db NA NA NA NA NA
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_06g0010980 RBH 0.0 0.0 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_06g0010870 RBH 0.0 0.0 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) NA NA NA NA NA
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_06g0010890 RBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) NA NA NA NA NA
Minghui 63 | MH63RS3 | HZAU OsMH63_06G0166900 RBH 0 0 0
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_06g0010580 RBH 0.0 0.0 0.0
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_06G0219000 RBH 0 0 0
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_06g0015190 SBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_06g0015150 SBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_06g0014850 SBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_Ung0033820 SBH 0.0 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) NA NA NA NA NA
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_06G005020 SBH 0.0 0.0 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) NA NA NA NA NA
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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