Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsNaBo_05g0025010 OGI:05072800 | 15/16 NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) Chr05:27699766-27702231
Gene Symbol OsFbox277, Os_F0150
DNA seq

ttacagggaaaagggagggcacagtggactaactcggaaagataaccggactcctgaaaataacaagagaaatggagaaaagagtttgtgtcacatggtactgcatttcttacatgtgatgtgagaactcacgagaactgtattgttatttattctatttttttgttaccgcttgagtgtcaaataattatttggttctgataaacaatgttggaaaaaaaatgtacattgcgaagttgtggttactggcatttcatacagtgattgagaagtgtcattttgttaaccatgcatattgggaaggaaaattcggaagactaaacaagaacatatgtatcttttattttgcaaggctaaggaattaattcaccacatgtatgcaacttagggttcaatacgggtcctaatcgcatacatctcttcactattaatttcagtaatgcaagtaccaaaacttacatcttacattaattgtttgaaacttacaaatctatttcacatataataaaattaacattgatgggtgcaaagcctataaaaagttataccgaagaacttaataagaaacataattcaatcttgttagcacaagtataatagcatattataagctaactataaacatatatgtggaggagataacataggagagagaataaaagcggactacaaatttaatacgttgtatgtatgtgagagatgtttttttaatgtgtatgagagatatgaccagatattaatgatataatatatatatttacagacaattattatatgaatagactattagattagcaatagatgatttagagctattagttgactacactattaaacttactagctagtcaacatgagaaatcactcccggaataactgaaccggaatatctgtgcaagaaactctctcaccgatctgctttagtacatcagctctgtcctcactgctccaacgacgatcttcacgaacaatgtcgtagtcccagtacacacctgcatatttgcacagactcacagacttcagagctaatgatacctccatcacaaagttaacaaagtaaacctgccttcccgtcccctcgaagccactcatccccaactccttcagcttcctgtgtcgcgactcgcatcgccgccacgagatctcgccgcggggctcgtcctcgcaggcggcgacatggacgtggaggatctcaaggcatggcgccacctccaagaggaggcgcggccatgagacgtcccacgacgatggcacgacgaccacgagctttcggaggtttggcagcgacggcaatggcgatgatggcggcgcatccatcgtcgccgccccgcgtccggtgaactccaggaacagctctgttatttctggggtgtactcagcaatctgcatcaggttcatgccccaaggcatggaggtggagtgatgatcatgcttgtatcgaaagatgaggttcaggcgtttgaggcatggcatgcagccacgctggaaccatacgcaggtctgcaccacggccatctcctcgagctttggaagagcgtagagaatgatcaggccaccgccgcagtggtcgaacacaagctgctcgatcgatgaacacggagcgtttacccgtagaacgccatcgaacatgcaggatttgaggtgcagcactcgcagctgtgtgcaagaagtgaacaccgattcgtagtctgctggacgcgtggagcttggcagatgctgcaagacgaggatcctcagagcttggaacccttgcaatggcgggatcgtgcagttagccagcgtcaggcttgtcagagtggagctgcggggatcagagcagataccttggtgagggaagatgtggaggcggtccagcggccgtagctgatgcgcgggcgtcccagcaagaatctcgagatccttgaCcccccaagcatcaatggccgtggcgatcaagcggttgatgctgtcggagtggtgattgatgatgaactccagcctcagcctagtgatcctcctccgtcgatcggggtcgtcgtcgtccggcgccgcgtcgaggaagctgtcgatggaggccaccattttccgcatggagaggcgctcgtacctgccggcgacaaccttggcatcgtcggcgtcgatgcctttagtggcgtgggggtggtggaggaggaggtggtcgcggcaccggtggtagcgcggcgggagcacgtcgctgacgaggaagtcgagggcgttgaggccgcgacagagggaggcccagcgcctggagagcgcccccgtggcgagcgccgtgcgggtgtcgaaccggcgcaggacgaggcgcagcaggtcgtccgggaggtcgctgatgcggtcctcgccgccgccgccgcagtccccggcgccaccgacgacgacgacacccttccgcctagccacggtggccgcgcgcgacgtcgccgtccggaggcgagagagcgcgcccttcttcttcatcctagccat

More
CDS seq

atggctaggatgaagaagaagggcgcgctctctcgcctccggacggcgacgtcgcgcgcggccaccgtggctaggcggaagggtgtcgtcgtcgtcggtggcgccggggactgcggcggcggcggcgaggaccgcatcagcgacctcccggacgacctgctgcgcctcgtcctgcgccggttcgacacccgcacggcgctcgccacgggggcgctctccaggcgctgggcctccctctgtcgcggcctcaacgccctcgacttcctcgtcagcgacgtgctcccgccgcgctaccaccggtgccgcgaccacctcctcctccaccacccccacgccactaaaggcatcgacgccgacgatgccaaggttgtcgccggcaggtacgagcgcctctccatgcggaaaatggtggcctccatcgacagcttcctcgacgcggcgccggacgacgacgaccccgatcgacggaggaggatcactaggctgaggctggagttcatcatcaatcaccactccgacagcatcaaccgcttgatcgccacggccattgatgcttgggggGtcaaggatctcgagattcttgctgggacgcccgcgcatcagctacggccgctggaccgcctccacatcttccctcaccaaggtatctgctctgatccccgcagctccactctgacaagcctgacgctggctaactgcacgatcccgccattgcaagggttccaagctctgaggatcctcgtcttgcagcatctgccaagctccacgcgtccagcagactacgaatcggtgttcacttcttgcacacagctgcgagtgctgcacctcaaatcctgcatgttcgatggcgttctacgggtaaacgctccgtgttcatcgatcgagcagcttgtgttcgaccactgcggcggtggcctgatcattctctacgctcttccaaagctcgaggagatggccgtggtgcagacctgcgtatggttccagcgtggctgcatgccatgcctcaaacgcctgaacctcatctttcgatacaagcatgatcatcactccacctccatgccttggggcatgaacctgatgcagattgctgagtacaccccagaaataacagagctgttcctggagttcaccggacgcggggcggcgacgatggatgcgccgccatcatcgccattgccgtcgctgccaaacctccgaaagctcgtggtcgtcgtgccatcgtcgtgggacgtctcatggccgcgcctcctcttggaggtggcgccatgccttgagatcctccacgtccatgtcgccgcctgcgaggacgagccccgcggcgagatctcgtggcggcgatgcgagtcgcgacacaggaagctgaaggagttggggatgagtggcttcgaggggacgggaaggcaggtttactttgttaactttgtgatggaggtatcattagctctgaagtctgtgagtctgtgcaaatatgcaggtgtgtactgggactacgacattgttcgtgaagatcgtcgttggagcagtgaggacagagctgatgtactaaagcagatcggagtccggttatctttccgagttagtccactgtgccctcccttttccctgtaa

More
Protein seq

MARMKKKGALSRLRTATSRAATVARRKGVVVVGGAGDCGGGGEDRISDLPDDLLRLVLRRFDTRTALATGALSRRWASLCRGLNALDFLVSDVLPPRYHRCRDHLLLHHPHATKGIDADDAKVVAGRYERLSMRKMVASIDSFLDAAPDDDDPDRRRRITRLRLEFIINHHSDSINRLIATAIDAWGVKDLEILAGTPAHQLRPLDRLHIFPHQGICSDPRSSTLTSLTLANCTIPPLQGFQALRILVLQHLPSSTRPADYESVFTSCTQLRVLHLKSCMFDGVLRVNAPCSSIEQLVFDHCGGGLIILYALPKLEEMAVVQTCVWFQRGCMPCLKRLNLIFRYKHDHHSTSMPWGMNLMQIAEYTPEITELFLEFTGRGAATMDAPPSSPLPSLPNLRKLVVVVPSSWDVSWPRLLLEVAPCLEILHVHVAACEDEPRGEISWRRCESRHRKLKELGMSGFEGTGRQVYFVNFVMEVSLALKSVSLCKYAGVYWDYDIVREDRRWSSEDRADVLKQIGVRLSFRVSPLCPPFSL

Function -

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsNaBo_05g0025010 OsNaBo_05g0025010.01 Chr05 27699766 27702231 - NAM
CDS seq

atggctaggatgaagaagaagggcgcgctctctcgcctccggacggcgacgtcgcgcgcggccaccgtggctaggcggaagggtgtcgtcgtcgtcggtggcgccggggactgcggcggcggcggcgaggaccgcatcagcgacctcccggacgacctgctgcgcctcgtcctgcgccggttcgacacccgcacggcgctcgccacgggggcgctctccaggcgctgggcctccctctgtcgcggcctcaacgccctcgacttcctcgtcagcgacgtgctcccgccgcgctaccaccggtgccgcgaccacctcctcctccaccacccccacgccactaaaggcatcgacgccgacgatgccaaggttgtcgccggcaggtacgagcgcctctccatgcggaaaatggtggcctccatcgacagcttcctcgacgcggcgccggacgacgacgaccccgatcgacggaggaggatcactaggctgaggctggagttcatcatcaatcaccactccgacagcatcaaccgcttgatcgccacggccattgatgcttgggggGtcaaggatctcgagattcttgctgggacgcccgcgcatcagctacggccgctggaccgcctccacatcttccctcaccaaggtatctgctctgatccccgcagctccactctgacaagcctgacgctggctaactgcacgatcccgccattgcaagggttccaagctctgaggatcctcgtcttgcagcatctgccaagctccacgcgtccagcagactacgaatcggtgttcacttcttgcacacagctgcgagtgctgcacctcaaatcctgcatgttcgatggcgttctacgggtaaacgctccgtgttcatcgatcgagcagcttgtgttcgaccactgcggcggtggcctgatcattctctacgctcttccaaagctcgaggagatggccgtggtgcagacctgcgtatggttccagcgtggctgcatgccatgcctcaaacgcctgaacctcatctttcgatacaagcatgatcatcactccacctccatgccttggggcatgaacctgatgcagattgctgagtacaccccagaaataacagagctgttcctggagttcaccggacgcggggcggcgacgatggatgcgccgccatcatcgccattgccgtcgctgccaaacctccgaaagctcgtggtcgtcgtgccatcgtcgtgggacgtctcatggccgcgcctcctcttggaggtggcgccatgccttgagatcctccacgtccatgtcgccgcctgcgaggacgagccccgcggcgagatctcgtggcggcgatgcgagtcgcgacacaggaagctgaaggagttggggatgagtggcttcgaggggacgggaaggcaggtttactttgttaactttgtgatggaggtatcattagctctgaagtctgtgagtctgtgcaaatatgcaggtgtgtactgggactacgacattgttcgtgaagatcgtcgttggagcagtgaggacagagctgatgtactaaagcagatcggagtccggttatctttccgagttagtccactgtgccctcccttttccctgtaa

More
Protein seq

MARMKKKGALSRLRTATSRAATVARRKGVVVVGGAGDCGGGGEDRISDLPDDLLRLVLRRFDTRTALATGALSRRWASLCRGLNALDFLVSDVLPPRYHRCRDHLLLHHPHATKGIDADDAKVVAGRYERLSMRKMVASIDSFLDAAPDDDDPDRRRRITRLRLEFIINHHSDSINRLIATAIDAWGVKDLEILAGTPAHQLRPLDRLHIFPHQGICSDPRSSTLTSLTLANCTIPPLQGFQALRILVLQHLPSSTRPADYESVFTSCTQLRVLHLKSCMFDGVLRVNAPCSSIEQLVFDHCGGGLIILYALPKLEEMAVVQTCVWFQRGCMPCLKRLNLIFRYKHDHHSTSMPWGMNLMQIAEYTPEITELFLEFTGRGAATMDAPPSSPLPSLPNLRKLVVVVPSSWDVSWPRLLLEVAPCLEILHVHVAACEDEPRGEISWRRCESRHRKLKELGMSGFEGTGRQVYFVNFVMEVSLALKSVSLCKYAGVYWDYDIVREDRRWSSEDRADVLKQIGVRLSFRVSPLCPPFSL

More
Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.000000 0.0 0.0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_05g0540600 SBH 0.674430 1.075943 2.944175
Nipponbare | IRGSP 1.0 | MSU LOC_Os05g46390 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os05g0540600 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_05g0025410 RBH 0.0 0.0 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_05g0025160 RBH 0.0 0.0 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_05g0025160 RBH 0.0 0.0 0.0
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_05g0025210 RBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_05g0025190 RBH 0.0 0.0 0.0
Minghui 63 | MH63RS3 | HZAU OsMH63_05G0417600 SBH 2.2354875 5.746275 7.90138
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_05g0024860 RBH 0.0 0.0 0.0
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_05G0429700 RBH 0 0 0.007549
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_05g0025030 RBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_05g0024910 RBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_05g0025110 RBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_05g0025100 RBH 0.0 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_05g0025150 RBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_05G024590 RBH 0.0 0.0 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_05g0025000 SBH 0.000000 2.055482 0.0
Powered by

© 2021- Rice Gene Index @Zhang Lab. All Rights Reserved.

National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

Any comments and suggestions, please contact us.