Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_05g0014460 | OGI:05048350 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr05:18703462-18706919 | ||||||||
| Gene Symbol | RLCK184, OsRLCK184 | ||||||||||
| DNA seq | gatgtaacaacagatgttaatcatttaatatgacactgaattagcaaagaactcaatcaatagccctttcaaagattaaaacataaaagggcactgaacaatctgaaattacatacaattctctcaaccaacaaaaggaggaagaaaaagaaagatacatacagctctgtttcttctcacctttccctaccaaattataccaaccatgataagcctaaaaaaaaatcatacatggcatatcacaacaatacagagcctgtacaacttctaagaaacaacagctgttagactctacagacaatcatcatgtcatcaaatagcagacatgcaatcaattttcatcttcgctacttaaacaatgtgctcccaagggtgatgatggcggttccatcaCccataatcgttgtcagagacatctctgtctcaagaattctgtctagttctgtcgcgactaacctcatctttggccttcttcttgaagatggagtcaggcactgaaaggtgaggccaacaaactctttcataccttctgaggtgaaattggcacctaaccttgggtcaattagttcgtttgaactgaaatgtccttcaatctttcaatgtgacaggaaaatggatgtcagctggaggtaggatatggaatataatcgtgtgcaagaaactgcaattctcttctgaaaatgttcttatttttccttttttgaactatatatctcagttgaggcaggaaagtagcatcaaatgtcaaggacctcttatgccaaaaggtgtgaaaaatgctccaatacgaatatttcctaactgttgttgaggaaatccctggccatggtttattaataaagttataaccacgggggcctcctctgctgtaggtttgatccacacacatacacgaaaaaaaaacctggcccactgcctaacagacaaacagtggcatttaccaaacatccatagttaccacTtttttgttgatgtggacataaacaagctatgacagattatattggaccaataaataaaaagttatgttcttttccaagcaacaaaagtaagaaccttcacaccatctctataaatactaagggatgagcctgaacactgggtttaagatatttgaaacacaaagtagaagtttttagctttcttTCttcgtaacaatagctaaatgtcaatggaaattacccactgggccagagattctctggaatctggagatatcaggcaagcagcttcccttccagtgatcaactccaaaaggaaaactccaaagctgtacacatcgctgctttcagaaaactgtagcaccgattgtaccctaagaacaaagatgcgtaatgaaacatcaatgactatatgacagaattagtgactaaatcattccagaactgcaagacttagttagaatacatgaattgaagatcttttcctaaaactgtgattgacttgtgacaaaattattgtacaagtttttcaaatataaatattatagggtaaagcagtgatcagcatatttattgtctttcggtcaaaaaacacatctattatctgacatgaaaaatagaagataaaaagatgtggtaattatacttactcaggatcttggtacacactactactgaacccatgagatgggccgacgtcttcgtatcctctaagtaacctaacaagtccagcatcagccacctttgcaatgaaattttcatcaaccaacacattgcttgtcttgaaatccttgtgaatcaaaggaggcacaagagtatgcagatgattgagacctgcaaataaaaaagaatttataattcacgtcaacaaagcaatccttgtgactcagaggaggctcaggatatgcagatgactcaaaccagcaaataaaaaaaattatactacttattacttaatgtctccaaagcaattagataactcacttatgttattacctttagctgctccaatggctattgagagcctttgtttgaactcaagccttgtcatggagcttttcccggtatctggtaaaacgtacaaggctttagaaagtatagcaagggcacaaaagcaagtacctaactaaacattaccatagagatggcgagagacactgccattgggcaagtactcatatactagcatttgtagaCccccttcttggcaataaccaatgagagtaacaatgttccggtgattaatctctgaaagcttcctaacctgcattttgcaaggggcaccaaagaagttaatgggagtgctgacatatgaggctgaaacaaatgcatttacttacccgtccctatctaatttatgaaactttctggactagcaaacgacaacaattgacaccagacagatcttactagctcccaaacaagccatttgactaaaattttcactctatgcccataaatatggcacactttagtgagatgcagatgcagttaatttcagaatctaataggagtaacagaaagtaccaccaaacattgaaggagacaccgaaagaatccagacaacatacaaacacatgaggaacaattaagaccaacacagttcaagctcaggacacagctaaattccattcttctataaaaaaaaaaggagttccaatctttcccccccaacaacaatatcaccctgattctgcatccacattttacctcttcagcgaattcctgcctcggcgccccaatgcgcttcttgatcgcgacgacggagccgtcaaggaggaggcccttgtacaccagcccgaagctgcccaggccaaccaggttggcctcactgaagctcttggtcgcctgagccagctcgtccaacgagaattgcctcgctccctggtgctccggcgccgacgagctcctgcctcccttgccccactccactgccaccacgcacattggcaccacacatcagcatcgaaatggatggaggatacaaaaggggccaagaactaagaaacaatggagaactgagaggcacccagggtggaaggatcggaggagccggtctcgtcggagttgcggCcccggcggcgggccatgcgccgcgcggcgcaccacagcgcggccacggcggcgagcagggcgacgcaggcggcggcgatgccagctacctcggcgaccggcagcgacatCcgggcggcgcccgtgacatcgaatcggcaaggccacggtttgtggtcgtcgtcgtcagagcaagaagcagcagcagcagaaagcggagccccgaaaccatcccaagctgcctaagcagccggccaatccatcatcatcgtcatcagcgggcgcattgatggaatgcggggcgagagcgagcagcgagcgatctttgtccgaatcgggagctaatctatctaccccgctgccaagaagaagcggcggcgctttaaagaggagaggggagggggagtggaccggggtggaggaggaggaggagcgccacacccacacccacatggagatggtaag
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| CDS seq | atgtcgctgccggtcgccgaggtagctggcatcgccgccgcctgcgtcgccctgctcgccgccgtggccgcgctgtggtgcgccgcgcggcgcatggcccgccgccgggGccgcaactccgacgagaccggctcctccgatccttccaccctggtggagtggggcaagggaggcaggagctcgtcggcgccggagcaccagggagcgaggcaattctcgttggacgagctggctcaggcgaccaagagcttcagtgaggccaacctggttggcctgggcagcttcgggctggtgtacaagggcctcctccttgacggctccgtcgtcgcgatcaagaagcgcattggggcgccgaggcaggaattcgctgaagaggttaggaagctttcagagattaatcaccggaacattgttactctcattggttattgccaagaaggggGtctacaaatgctagtatatgagtacttgcccaatggcagtgtctctcgccatctctatgataccgggaaaagctccatgacaaggcttgagttcaaacaaaggctctcaatagccattggagcagctaaaggtctcaatcatctgcatactcttgtgcctcctttgattcacaaggatttcaagacaagcaatgtgttggttgatgaaaatttcattgcaaaggtggctgatgctggacttgttaggttacttagaggatacgaagacgtcggcccatctcatgggttcagtagtagtgtgtaccaagatcctgaggtacaatcggtgctacagttttctgaaagcagcgatgtgtacagctttggagttttccttttggagttgatcactggaagggaagctgcttgcctgatatctccagattccagagaatctctggcccagtggattgaaggacatttcagttcaaacgaactaattgacccaaggttaggtgccaatttcacctcagaaggtatgaaagagtttgttggcctcacctttcagtgcctgactccatcttcaagaagaaggccaaagatgaggttagtcgcgacagaactagacagaattcttgagacagagatgtctctgacaacgattatggGtgatggaaccgccatcatcacccttgggagcacattgtttaagtag
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| Protein seq | MSLPVAEVAGIAAACVALLAAVAALWCAARRMARRRGRNSDETGSSDPSTLVEWGKGGRSSSAPEHQGARQFSLDELAQATKSFSEANLVGLGSFGLVYKGLLLDGSVVAIKKRIGAPRQEFAEEVRKLSEINHRNIVTLIGYCQEGGLQMLVYEYLPNGSVSRHLYDTGKSSMTRLEFKQRLSIAIGAAKGLNHLHTLVPPLIHKDFKTSNVLVDENFIAKVADAGLVRLLRGYEDVGPSHGFSSSVYQDPEVQSVLQFSESSDVYSFGVFLLELITGREAACLISPDSRESLAQWIEGHFSSNELIDPRLGANFTSEGMKEFVGLTFQCLTPSSRRRPKMRLVATELDRILETEMSLTTIMGDGTAIITLGSTLFK |
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| Function | Proline-rich receptor-like protein kinase PERK8 [UniProtKB/Swiss-Prot:Q9FFW5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_05g0014460 | OsNaBo_05g0014460.01 | Chr05 | 18703462 | 18706919 | - | NAM | ||
| CDS seq | atgtcgctgccggtcgccgaggtagctggcatcgccgccgcctgcgtcgccctgctcgccgccgtggccgcgctgtggtgcgccgcgcggcgcatggcccgccgccgggGccgcaactccgacgagaccggctcctccgatccttccaccctggtggagtggggcaagggaggcaggagctcgtcggcgccggagcaccagggagcgaggcaattctcgttggacgagctggctcaggcgaccaagagcttcagtgaggccaacctggttggcctgggcagcttcgggctggtgtacaagggcctcctccttgacggctccgtcgtcgcgatcaagaagcgcattggggcgccgaggcaggaattcgctgaagaggttaggaagctttcagagattaatcaccggaacattgttactctcattggttattgccaagaaggggGtctacaaatgctagtatatgagtacttgcccaatggcagtgtctctcgccatctctatgataccgggaaaagctccatgacaaggcttgagttcaaacaaaggctctcaatagccattggagcagctaaaggtctcaatcatctgcatactcttgtgcctcctttgattcacaaggatttcaagacaagcaatgtgttggttgatgaaaatttcattgcaaaggtggctgatgctggacttgttaggttacttagaggatacgaagacgtcggcccatctcatgggttcagtagtagtgtgtaccaagatcctgaggtacaatcggtgctacagttttctgaaagcagcgatgtgtacagctttggagttttccttttggagttgatcactggaagggaagctgcttgcctgatatctccagattccagagaatctctggcccagtggattgaaggacatttcagttcaaacgaactaattgacccaaggttaggtgccaatttcacctcagaaggtatgaaagagtttgttggcctcacctttcagtgcctgactccatcttcaagaagaaggccaaagatgaggttagtcgcgacagaactagacagaattcttgagacagagatgtctctgacaacgattatggGtgatggaaccgccatcatcacccttgggagcacattgtttaagtag
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| Protein seq | MSLPVAEVAGIAAACVALLAAVAALWCAARRMARRRGRNSDETGSSDPSTLVEWGKGGRSSSAPEHQGARQFSLDELAQATKSFSEANLVGLGSFGLVYKGLLLDGSVVAIKKRIGAPRQEFAEEVRKLSEINHRNIVTLIGYCQEGGLQMLVYEYLPNGSVSRHLYDTGKSSMTRLEFKQRLSIAIGAAKGLNHLHTLVPPLIHKDFKTSNVLVDENFIAKVADAGLVRLLRGYEDVGPSHGFSSSVYQDPEVQSVLQFSESSDVYSFGVFLLELITGREAACLISPDSRESLAQWIEGHFSSNELIDPRLGANFTSEGMKEFVGLTFQCLTPSSRRRPKMRLVATELDRILETEMSLTTIMGDGTAIITLGSTLFK
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 2.167201 | 1.163714 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_05g0371600 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g30820 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os05g0371600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_05g0014630 | RBH | 0.0 | 1.200672 | 0.699403 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_05g0014630 | RBH | 0.0 | 0.000000 | 0.352924 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_05g0014480 | RBH | 0.0 | 2.920108 | 1.643673 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_05g0014500 | RBH | 0.0 | 0.244205 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_05g0014660 | RBH | 0.0 | 7.665028 | 0.627503 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_05G0273900 | RBH | 2.9088345 | 1.6732455 | 2.610559 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_05g0014290 | RBH | 0.0 | 0.250098 | 0.342341 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_05G0284900 | RBH | 4.1741405 | 0.4724025 | 35.18861 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0014450 | RBH | 0.0 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_05g0014500 | RBH | 0.000000 | 2.497298 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_05g0014510 | RBH | 0.0 | 4.784025 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_05g0014570 | RBH | 0.0 | 0.000000 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_05g0014600 | RBH | 0.0 | 2.307269 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_05G014200 | RBH | 0.0 | 1.482378 | 1.574469 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0045280 | RBH | 0.0 | 16.180099 | 0.0 |
