Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_05g0011580 | OGI:05038030 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr05:15599313-15601902 | ||||||||
| Gene Symbol | RLCK183, OsRLCK183, OsCrRLK1L2 | ||||||||||
| DNA seq | atgcaacttgatagcaataatcgaagttgggatGgggacactagctccacgtttgcaccatcagtgaaagggcttgcagctagagcttcatatcgagacccttccctcccatctcttgtcccttacatgacatcccgcatcttcatttcaaattacacatattccttcccagttatcccaggccgcatgtttgtgcgactttacttctatccagtggcatatggcaactatgcttctagagatgcctactttggtgtcacaaccaacaatttgacccttttagacaacttcaatgctttgcaaacagctctagctgcaaagtatgcctacatccttcgagaattctcgctgaatgtcacttcaggtagcctggacctcacctttttcccatccacgcagaatggctcttacgcatttgtgaatgggattgagattgtccccacgcccgacatctttacaacactatcacctataccacctaccaatggcaaccccgatccatctgatatagattctatgatcagtttccaaacgatgtaccgcctcaatgttgggggcatgacaatcagtccacaaggtgattctatgttctatcgttcatgggagaatgattccccatatatagatggttctgcctttGgggtcaccttcagcaaagatagtaatgtcaccatcacatatccaagtactatgccaaactatatcgcacctgctgatgtatatggaacagctaggtcaatggggccaattgcacagatcaaccttcactacaaacttacatggatcttaccagttgatgcagggttctattacctcctaaggttccatttttgtgagatcgagtatcctataaccaaggtgaaccagaggtcgttcttcatttacatcaacaaccagacggtacaggaacaaatggatgtaattgtttggagtggaggaattggcataacaacatataccgactatgttatcgtcacagttggttctggtcagatggacttgtgggttgcacttcaccctgatctttcaagtggaccagagtattacgatgcaatactaaatggccttgaggacttcaagctacaggacattggaaaaaaaagtcttgctggccttaaccctccacttccaccacaaccaaagtctgatgtgaaccctaaaggggtatctggtggagggaaatcaaagggtgctgtcccagcatccatacgtggagccatgggtagcactgccactatgcttatcgcttgtttttctgtgtgcatcatctgcagactaaagaaggtagcgaagcattctttcatgactgataaaaagtgcatgacttatcgaactgaattctaccattcaccatcaaatctttgtcggaatttcacctttgacgaaatacaagttgcaacgagaaactttgatgaaagccttcttcttggtagaggtggaTttggggatgtctaccgtggagaaatagacaataatggcgaaaatgtagcgatcaagcggagcaacccattatctgtgcagggtgttcatgagttccagaccgagattgagttgttgtccaagcttagatattgtcatctcgtgtctctaatcggatactgcaaggaaaagaatgagatgatattggtgtatgaatacatggcccaGgggacacttcgggagcacctctacaacagtaataagccatctttaccatggaagcaacgcctcaagatctgcattggtgcagcccgagggctgcattacctgcatatgggtgcaaatcaaaccattatccatcgtgacgtgaagactgccaatattctattggatgacaagtgggtggcaaaggtttcagactttgggttgtccaaggccaacccagacattgacagcacccatgtcagcacagttgtgaagggaactttcggatatcttgatcctgagtattatcggaggaagcaacttacccaaaaatcagatgtctactcttttGgggttgtgttgtttgagatcctatgcgcgcgccctgcagtgaacatagagcttcctgaagagcaagcaagcttgcgtgactgggcgctatcttgccagaagaaaggcatgcttggcaaaattattgatccacatctccatggagaaatcagtcctccctgccttaggatgtttgctgattgtgcaaaacaatgtgttgctgatcgcagcatcgacaggccgctgatgagtgatgttctttggagtctggaagctgcactgaagctgcaagagaatgcagagaataacaaaaaattcagtgaagcaacaacatcgtcaaagagaacaccagacttgataactatcatgggtactgacaaaccatcgacctactcaacaatgagcatcaccggacaaaagatcatcttctctgatatgatgcacccacagggccgatgaaggacaacagttgaggatttcaattaatttctgatccagagttcatgtattgatgatcttttgatcgcaattactagaatattgcattattgatcaattgtgtcagtttctgtctaactagaaccaaatgttagtgattctaaattccgaataaaaacccaatgctacaggtttgact
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| CDS seq | atgcaacttgatagcaataatcgaagttgggatGgggacactagctccacgtttgcaccatcagtgaaagggcttgcagctagagcttcatatcgagacccttccctcccatctcttgtcccttacatgacatcccgcatcttcatttcaaattacacatattccttcccagttatcccaggccgcatgtttgtgcgactttacttctatccagtggcatatggcaactatgcttctagagatgcctactttggtgtcacaaccaacaatttgacccttttagacaacttcaatgctttgcaaacagctctagctgcaaagtatgcctacatccttcgagaattctcgctgaatgtcacttcaggtagcctggacctcacctttttcccatccacgcagaatggctcttacgcatttgtgaatgggattgagattgtccccacgcccgacatctttacaacactatcacctataccacctaccaatggcaaccccgatccatctgatatagattctatgatcagtttccaaacgatgtaccgcctcaatgttgggggcatgacaatcagtccacaaggtgattctatgttctatcgttcatgggagaatgattccccatatatagatggttctgcctttGgggtcaccttcagcaaagatagtaatgtcaccatcacatatccaagtactatgccaaactatatcgcacctgctgatgtatatggaacagctaggtcaatggggccaattgcacagatcaaccttcactacaaacttacatggatcttaccagttgatgcagggttctattacctcctaaggttccatttttgtgagatcgagtatcctataaccaaggtgaaccagaggtcgttcttcatttacatcaacaaccagacggtacaggaacaaatggatgtaattgtttggagtggaggaattggcataacaacatataccgactatgttatcgtcacagttggttctggtcagatggacttgtgggttgcacttcaccctgatctttcaagtggaccagagtattacgatgcaatactaaatggccttgaggacttcaagctacaggacattggaaaaaaaagtcttgctggccttaaccctccacttccaccacaaccaaagtctgatgtgaaccctaaaggggtatctggtggagggaaatcaaagggtgctgtcccagcatccatacgtggagccatgggtagcactgccactatgcttatcgcttgtttttctgtgtgcatcatctgcagactaaagaaggtagcgaagcattctttcatgactgataaaaagtgcatgacttatcgaactgaattctaccattcaccatcaaatctttgtcggaatttcacctttgacgaaatacaagttgcaacgagaaactttgatgaaagccttcttcttggtagaggtggaTttggggatgtctaccgtggagaaatagacaataatggcgaaaatgtagcgatcaagcggagcaacccattatctgtgcagggtgttcatgagttccagaccgagattgagttgttgtccaagcttagatattgtcatctcgtgtctctaatcggatactgcaaggaaaagaatgagatgatattggtgtatgaatacatggcccaGgggacacttcgggagcacctctacaacagtaataagccatctttaccatggaagcaacgcctcaagatctgcattggtgcagcccgagggctgcattacctgcatatgggtgcaaatcaaaccattatccatcgtgacgtgaagactgccaatattctattggatgacaagtgggtggcaaaggtttcagactttgggttgtccaaggccaacccagacattgacagcacccatgtcagcacagttgtgaagggaactttcggatatcttgatcctgagtattatcggaggaagcaacttacccaaaaatcagatgtctactcttttGgggttgtgttgtttgagatcctatgcgcgcgccctgcagtgaacatagagcttcctgaagagcaagcaagcttgcgtgactgggcgctatcttgccagaagaaaggcatgcttggcaaaattattgatccacatctccatggagaaatcagtcctccctgccttaggatgtttgctgattgtgcaaaacaatgtgttgctgatcgcagcatcgacaggccgctgatgagtgatgttctttggagtctggaagctgcactgaagctgcaagagaatgcagagaataacaaaaaattcagtgaagcaacaacatcgtcaaagagaacaccagacttgataactatcatgggtactgacaaaccatcgacctactcaacaatgagcatcaccggacaaaagatcatcttctctgatatgatgcacccacagggccgatga
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| Protein seq | MQLDSNNRSWDGDTSSTFAPSVKGLAARASYRDPSLPSLVPYMTSRIFISNYTYSFPVIPGRMFVRLYFYPVAYGNYASRDAYFGVTTNNLTLLDNFNALQTALAAKYAYILREFSLNVTSGSLDLTFFPSTQNGSYAFVNGIEIVPTPDIFTTLSPIPPTNGNPDPSDIDSMISFQTMYRLNVGGMTISPQGDSMFYRSWENDSPYIDGSAFGVTFSKDSNVTITYPSTMPNYIAPADVYGTARSMGPIAQINLHYKLTWILPVDAGFYYLLRFHFCEIEYPITKVNQRSFFIYINNQTVQEQMDVIVWSGGIGITTYTDYVIVTVGSGQMDLWVALHPDLSSGPEYYDAILNGLEDFKLQDIGKKSLAGLNPPLPPQPKSDVNPKGVSGGGKSKGAVPASIRGAMGSTATMLIACFSVCIICRLKKVAKHSFMTDKKCMTYRTEFYHSPSNLCRNFTFDEIQVATRNFDESLLLGRGGFGDVYRGEIDNNGENVAIKRSNPLSVQGVHEFQTEIELLSKLRYCHLVSLIGYCKEKNEMILVYEYMAQGTLREHLYNSNKPSLPWKQRLKICIGAARGLHYLHMGANQTIIHRDVKTANILLDDKWVAKVSDFGLSKANPDIDSTHVSTVVKGTFGYLDPEYYRRKQLTQKSDVYSFGVVLFEILCARPAVNIELPEEQASLRDWALSCQKKGMLGKIIDPHLHGEISPPCLRMFADCAKQCVADRSIDRPLMSDVLWSLEAALKLQENAENNKKFSEATTSSKRTPDLITIMGTDKPSTYSTMSITGQKIIFSDMMHPQGR |
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| Function | Receptor-like protein kinase FERONIA [UniProtKB/Swiss-Prot:Q9SCZ4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_05g0011580 | OsNaBo_05g0011580.01 | Chr05 | 15599313 | 15601902 | + | NAM | ||
| CDS seq | atgcaacttgatagcaataatcgaagttgggatGgggacactagctccacgtttgcaccatcagtgaaagggcttgcagctagagcttcatatcgagacccttccctcccatctcttgtcccttacatgacatcccgcatcttcatttcaaattacacatattccttcccagttatcccaggccgcatgtttgtgcgactttacttctatccagtggcatatggcaactatgcttctagagatgcctactttggtgtcacaaccaacaatttgacccttttagacaacttcaatgctttgcaaacagctctagctgcaaagtatgcctacatccttcgagaattctcgctgaatgtcacttcaggtagcctggacctcacctttttcccatccacgcagaatggctcttacgcatttgtgaatgggattgagattgtccccacgcccgacatctttacaacactatcacctataccacctaccaatggcaaccccgatccatctgatatagattctatgatcagtttccaaacgatgtaccgcctcaatgttgggggcatgacaatcagtccacaaggtgattctatgttctatcgttcatgggagaatgattccccatatatagatggttctgcctttGgggtcaccttcagcaaagatagtaatgtcaccatcacatatccaagtactatgccaaactatatcgcacctgctgatgtatatggaacagctaggtcaatggggccaattgcacagatcaaccttcactacaaacttacatggatcttaccagttgatgcagggttctattacctcctaaggttccatttttgtgagatcgagtatcctataaccaaggtgaaccagaggtcgttcttcatttacatcaacaaccagacggtacaggaacaaatggatgtaattgtttggagtggaggaattggcataacaacatataccgactatgttatcgtcacagttggttctggtcagatggacttgtgggttgcacttcaccctgatctttcaagtggaccagagtattacgatgcaatactaaatggccttgaggacttcaagctacaggacattggaaaaaaaagtcttgctggccttaaccctccacttccaccacaaccaaagtctgatgtgaaccctaaaggggtatctggtggagggaaatcaaagggtgctgtcccagcatccatacgtggagccatgggtagcactgccactatgcttatcgcttgtttttctgtgtgcatcatctgcagactaaagaaggtagcgaagcattctttcatgactgataaaaagtgcatgacttatcgaactgaattctaccattcaccatcaaatctttgtcggaatttcacctttgacgaaatacaagttgcaacgagaaactttgatgaaagccttcttcttggtagaggtggaTttggggatgtctaccgtggagaaatagacaataatggcgaaaatgtagcgatcaagcggagcaacccattatctgtgcagggtgttcatgagttccagaccgagattgagttgttgtccaagcttagatattgtcatctcgtgtctctaatcggatactgcaaggaaaagaatgagatgatattggtgtatgaatacatggcccaGgggacacttcgggagcacctctacaacagtaataagccatctttaccatggaagcaacgcctcaagatctgcattggtgcagcccgagggctgcattacctgcatatgggtgcaaatcaaaccattatccatcgtgacgtgaagactgccaatattctattggatgacaagtgggtggcaaaggtttcagactttgggttgtccaaggccaacccagacattgacagcacccatgtcagcacagttgtgaagggaactttcggatatcttgatcctgagtattatcggaggaagcaacttacccaaaaatcagatgtctactcttttGgggttgtgttgtttgagatcctatgcgcgcgccctgcagtgaacatagagcttcctgaagagcaagcaagcttgcgtgactgggcgctatcttgccagaagaaaggcatgcttggcaaaattattgatccacatctccatggagaaatcagtcctccctgccttaggatgtttgctgattgtgcaaaacaatgtgttgctgatcgcagcatcgacaggccgctgatgagtgatgttctttggagtctggaagctgcactgaagctgcaagagaatgcagagaataacaaaaaattcagtgaagcaacaacatcgtcaaagagaacaccagacttgataactatcatgggtactgacaaaccatcgacctactcaacaatgagcatcaccggacaaaagatcatcttctctgatatgatgcacccacagggccgatga
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| Protein seq | MQLDSNNRSWDGDTSSTFAPSVKGLAARASYRDPSLPSLVPYMTSRIFISNYTYSFPVIPGRMFVRLYFYPVAYGNYASRDAYFGVTTNNLTLLDNFNALQTALAAKYAYILREFSLNVTSGSLDLTFFPSTQNGSYAFVNGIEIVPTPDIFTTLSPIPPTNGNPDPSDIDSMISFQTMYRLNVGGMTISPQGDSMFYRSWENDSPYIDGSAFGVTFSKDSNVTITYPSTMPNYIAPADVYGTARSMGPIAQINLHYKLTWILPVDAGFYYLLRFHFCEIEYPITKVNQRSFFIYINNQTVQEQMDVIVWSGGIGITTYTDYVIVTVGSGQMDLWVALHPDLSSGPEYYDAILNGLEDFKLQDIGKKSLAGLNPPLPPQPKSDVNPKGVSGGGKSKGAVPASIRGAMGSTATMLIACFSVCIICRLKKVAKHSFMTDKKCMTYRTEFYHSPSNLCRNFTFDEIQVATRNFDESLLLGRGGFGDVYRGEIDNNGENVAIKRSNPLSVQGVHEFQTEIELLSKLRYCHLVSLIGYCKEKNEMILVYEYMAQGTLREHLYNSNKPSLPWKQRLKICIGAARGLHYLHMGANQTIIHRDVKTANILLDDKWVAKVSDFGLSKANPDIDSTHVSTVVKGTFGYLDPEYYRRKQLTQKSDVYSFGVVLFEILCARPAVNIELPEEQASLRDWALSCQKKGMLGKIIDPHLHGEISPPCLRMFADCAKQCVADRSIDRPLMSDVLWSLEAALKLQENAENNKKFSEATTSSKRTPDLITIMGTDKPSTYSTMSITGQKIIFSDMMHPQGR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.191491 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_05g0317900 | RBH | 0.718716 | 0.494650 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g25370 | RBH | 0.485714 | 0.332475 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os05g0317900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_05g0011560 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_05g0011580 | RBH | 0.099201 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_05g0011520 | RBH | 0.720185 | 0.0 | 0.225995 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_05g0011590 | RBH | 0.0 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_05g0011580 | RBH | 2.488006 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_05G0216900 | RBH | 0.1448025 | 0.0065795 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_05g0011330 | RBH | 0.402872 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_05G0226700 | RBH | 0.3229385 | 0.0415805 | 0.1131095 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0011510 | RBH | 0.169655 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_05g0011430 | RBH | 0.404361 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_05g0011560 | RBH | 4.538705 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_05g0011580 | RBH | 0.0 | 0.0 | 0.088884 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_05g0011590 | RBH | 0.119851 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_05G011280 | RBH | 0.127635 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_05g0011570 | RBH | 0.332126 | 4.227867 | 1.678961 |
