Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_04g0031170 | OGI:04103020 | 15/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr04:34976263-34978211 | ||||||||
| Gene Symbol | prx59, OsPRX59 | ||||||||||
| DNA seq | tttaataaactacactttgttttgtttttatctgattaagtgtcgtgctatgccgaacgatggaaacattaattttgggtttatgctgtgacaaagacagctgtgatgatgtagcactaactgatgatgatgatacatttgacatgcagttactctgtcccgaccgaggaatcgagtagtaactttactttttatgaagcaaaaccattctaactaagcagagaatgcatggaaaccAaacaccacgcgcagatggcatcctcttAattattattactagcacaaaacataaacataaaacgatcactaattactccataagttaattaggcgtcggcggcgaagccttggtcgtcgtcggcagcgttgaggaggtcggaggagcggcggttgggagcggcgcagttgttgcggatctcgccggcgttgCcggtgaggacgtccatctggctcatcttgaccatggagcgtgcgaactggtcgaagaaggcggcctggttgagggcgaagcggacggcggtgcggttggtctgcgcgtcctcgatgaggccctggtcggacttgaagatcccctgcttggcgatgaggtcgaagtagtacttgttgtcgaaggcgttgggcgtgcggacgtccagctcctgcgtgaccgagttcaccggcacgtccttggcgcacttggcctgcagcttcttcaccagcacagggtccatgatgggcttggagccatcgaagcggtcgttgaagctgccgcagtggcctagtccgatggtgtgcgcgccggacagcgccaccaggtccgtcttgtccaggtttcggtccttgaacgcctggatgagcgtgggcacgtcgaagaagggcgccggcaggaggcccaccttgtcgctcgacgccggtgccagcccgtcgcgccgccccagaggcacgtcgaagtagggcccgccggactgcatataaatccatgtaaatgtaattaaattAaatatgttaatttgttcagttcttgagtaaaaatcccgactgttcattattaattaagaattagacgtacggcgacgatggcgtcacgcgtggcgagcgtggtgatgtcggcgcaggacaccttggcgccgcaggcggagtgtacggcggcgcggatgtcctcgatgagcttcagcgccgacggccgcagcgtctggttgggtacttcacccagctcgctttgggaacccgtcaggaggaccgacgcgtcgcacccctgaacacttaattaattatgttaatatacTActgtagttactaaaactcggtatttaatttgtttttttttatgtattgccatctgtaagaaggaggcaccatgcatcAaccgaagcggcaactactggagtaaaatggtagtaggacgtgcctgcgggaagcagtcgtggaagaagatgcggacgaggccggcggcgatgccgatgtcgcggcggagggcctcggtgacgtgccacctcacgatgccctccaccgacgggcacgacgtgtcatagaacccccaggagaggccggcgacgacgggttcgccggtggtcaccacggccgcgcaacgggcagcaaagaggcccgagatcagtagcacAaccatacccagcttggacgccattgctcaacactctagctaacaaaggtcgatcactctcagctcgacctctgcctcctgcaaatggtccatctctccatgccctatatatatactggactggaccctatcttgtggaaaagtggaatataatgtatactcctactacgtgcatagtatgttggtctaggattgtggcttgattgctcaagccagcacattatcaagatgtcagtttgctgtttctaattaattgttatgtccaagcccgatctgatccacaggaggcaggcatatgCctacatcaaaggcagagatcaataattaatatatcaccacctaaccttgc
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| CDS seq | atggcgtccaagctgggtatggtTgtgctactgatctcgggcctctttgctgcccgttgcgcggccgtggtgaccaccggcgaacccgtcgtcgccggcctctcctgggggttctatgacacgtcgtgcccgtcggtggagggcatcgtgaggtggcacgtcaccgaggccctccgccgcgacatcggcatcgccgccggcctcgtccgcatcttcttccacgactgcttcccgcaggggtgcgacgcgtcggtcctcctgacgggttcccaaagcgagctgggtgaagtacccaaccagacgctgcggccgtcggcgctgaagctcatcgaggacatccgcgccgccgtacactccgcctgcggcgccaaggtgtcctgcgccgacatcaccacgctcgccacgcgtgacgccatcgtcgcctccggcgggccctacttcgacgtgcctctggggcggcgcgacgggctggcaccggcgtcgagcgacaaggtgggcctcctgccggcgcccttcttcgacgtgcccacgctcatccaggcgttcaaggaccgaaacctggacaagacggacctggtggcgctgtccggcgcgcacaccatcggactaggccactgcggcagcttcaacgaccgcttcgatggctccaagcccatcatggaccctgtgctggtgaagaagctgcaggccaagtgcgccaaggacgtgccggtgaactcggtcacgcaggagctggacgtccgcacgcccaacgccttcgacaacaagtactacttcgacctcatcgccaagcaggggatcttcaagtccgaccagggcctcatcgaggacgcgcagaccaaccgcaccgccgtccgcttcgccctcaaccaggccgccttcttcgaccagttcgcacgctccatggtcaagatgagccagatggacgtcctcaccgGcaacgccggcgagatccgcaacaactgcgccgctcccaaccgccgctcctccgacctcctcaacgctgccgacgacgaccaaggcttcgccgccgacgcctaa
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| Protein seq | MASKLGMVVLLISGLFAARCAAVVTTGEPVVAGLSWGFYDTSCPSVEGIVRWHVTEALRRDIGIAAGLVRIFFHDCFPQGCDASVLLTGSQSELGEVPNQTLRPSALKLIEDIRAAVHSACGAKVSCADITTLATRDAIVASGGPYFDVPLGRRDGLAPASSDKVGLLPAPFFDVPTLIQAFKDRNLDKTDLVALSGAHTIGLGHCGSFNDRFDGSKPIMDPVLVKKLQAKCAKDVPVNSVTQELDVRTPNAFDNKYYFDLIAKQGIFKSDQGLIEDAQTNRTAVRFALNQAAFFDQFARSMVKMSQMDVLTGNAGEIRNNCAAPNRRSSDLLNAADDDQGFAADA |
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| Function | Peroxidase 12 [UniProtKB/Swiss-Prot:Q96520] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_04g0031170 | OsNaBo_04g0031170.01 | Chr04 | 34976263 | 34978211 | - | NAM | ||
| CDS seq | atggcgtccaagctgggtatggtTgtgctactgatctcgggcctctttgctgcccgttgcgcggccgtggtgaccaccggcgaacccgtcgtcgccggcctctcctgggggttctatgacacgtcgtgcccgtcggtggagggcatcgtgaggtggcacgtcaccgaggccctccgccgcgacatcggcatcgccgccggcctcgtccgcatcttcttccacgactgcttcccgcaggggtgcgacgcgtcggtcctcctgacgggttcccaaagcgagctgggtgaagtacccaaccagacgctgcggccgtcggcgctgaagctcatcgaggacatccgcgccgccgtacactccgcctgcggcgccaaggtgtcctgcgccgacatcaccacgctcgccacgcgtgacgccatcgtcgcctccggcgggccctacttcgacgtgcctctggggcggcgcgacgggctggcaccggcgtcgagcgacaaggtgggcctcctgccggcgcccttcttcgacgtgcccacgctcatccaggcgttcaaggaccgaaacctggacaagacggacctggtggcgctgtccggcgcgcacaccatcggactaggccactgcggcagcttcaacgaccgcttcgatggctccaagcccatcatggaccctgtgctggtgaagaagctgcaggccaagtgcgccaaggacgtgccggtgaactcggtcacgcaggagctggacgtccgcacgcccaacgccttcgacaacaagtactacttcgacctcatcgccaagcaggggatcttcaagtccgaccagggcctcatcgaggacgcgcagaccaaccgcaccgccgtccgcttcgccctcaaccaggccgccttcttcgaccagttcgcacgctccatggtcaagatgagccagatggacgtcctcaccgGcaacgccggcgagatccgcaacaactgcgccgctcccaaccgccgctcctccgacctcctcaacgctgccgacgacgaccaaggcttcgccgccgacgcctaa
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| Protein seq | MASKLGMVVLLISGLFAARCAAVVTTGEPVVAGLSWGFYDTSCPSVEGIVRWHVTEALRRDIGIAAGLVRIFFHDCFPQGCDASVLLTGSQSELGEVPNQTLRPSALKLIEDIRAAVHSACGAKVSCADITTLATRDAIVASGGPYFDVPLGRRDGLAPASSDKVGLLPAPFFDVPTLIQAFKDRNLDKTDLVALSGAHTIGLGHCGSFNDRFDGSKPIMDPVLVKKLQAKCAKDVPVNSVTQELDVRTPNAFDNKYYFDLIAKQGIFKSDQGLIEDAQTNRTAVRFALNQAAFFDQFARSMVKMSQMDVLTGNAGEIRNNCAAPNRRSSDLLNAADDDQGFAADA
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 138.167709 | 2.783386 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0688100 | RBH | 0.493220 | 1.670614 | 5.703595 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g59150 | RBH | 0.288473 | 0.781369 | 1.025260 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0688100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0031880 | SBH | 0.0 | 41.363003 | 0.926877 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0032660 | RBH | 0.100051 | 18.292843 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0032230 | RBH | 0.000000 | 70.289146 | 0.978278 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0032080 | SBH | 0.080520 | 2.683309 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0032360 | RBH | 0.0 | 80.167061 | 5.450377 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0556300 | RBH | 8.729002 | 148.3910445 | 169.1086805 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0030980 | RBH | 0.069409 | 7.706303 | 0.188825 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0562200 | RBH | 10.4172315 | 216.0408785 | 5.619738 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0031460 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0031250 | RBH | 0.0 | 77.532555 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0031390 | RBH | 1.691352 | 16.330233 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0031940 | RBH | 0.326818 | 8.829074 | 0.544231 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0031940 | RBH | 0.400996 | 23.364229 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G031430 | RBH | 0.000000 | 39.420788 | 1.559325 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
