Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_04g0011040 | OGI:04061400 | 15/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr04:18752585-18752803 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | atgctggagataaccattgaagatgtggatcacatactcggcgtgccatcaaaaggtgttgaactggttgaagtcccacgagcaatCcaagCTgacgttgatgccccgaaggacaaagataaaaacaaagctctacaggcaacaaaggccgctctgtttgcattatataaagacaaaagggggactaagataactctgtcagccttgcgggattcttga |
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| CDS seq | atgctggagataaccattgaagatgtggatcacatactcggcgtgccatcaaaaggtgttgaactggttgaagtcccacgagcaatCcaagCTgacgttgatgccccgaaggacaaagataaaaacaaagctctacaggcaacaaaggccgctctgtttgcattatataaagacaaaagggggactaagataactctgtcagccttgcgggattcttga |
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| Protein seq | MLEITIEDVDHILGVPSKGVELVEVPRAIQADVDAPKDKDKNKALQATKAALFALYKDKRGTKITLSALRDS |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_04g0011040 | OsNaBo_04g0011040.01 | Chr04 | 18752585 | 18752803 | + | NAM | ||
| CDS seq | atgctggagataaccattgaagatgtggatcacatactcggcgtgccatcaaaaggtgttgaactggttgaagtcccacgagcaatCcaagCTgacgttgatgccccgaaggacaaagataaaaacaaagctctacaggcaacaaaggccgctctgtttgcattatataaagacaaaagggggactaagataactctgtcagccttgcgggattcttga
More
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| Protein seq | MLEITIEDVDHILGVPSKGVELVEVPRAIQADVDAPKDKDKNKALQATKAALFALYKDKRGTKITLSALRDS |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g32240 | RBH | 0.0 | 0.000000 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0011540 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0012330 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0012020 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0011690 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0011940 | RBH | 0.253248 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0315600 | SBH | 0.466318 | 0.245589 | 0.991186 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0010850 | RBH | 0.114109 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0304300 | RBH | 0.17024 | 0.1319715 | 0.215676 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0011500 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0011100 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0011120 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0011620 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0011850 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G011030 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0018870 | RBH | 0.0 | 0.0 | 0.0 |
