Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_04g0006970 | OGI:04042470 | 4/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr04:12987732-12988852 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | atggttagttgtgtcttctgacttctgtactattttttttgttcattattcactacaaaacatttattgcaagttatgtatgggattaagatatactttgcgttaatatatgtatgcttgcacttggatatcattagtggtttgagtttatttttaatgttgaactactttccttggtactatgtacatagtccgtagtctgtaacttcgtacccccatcgttgaaatcctgcgtccgccactgactgctgcgtcgccgtccagtgctgcggccgcgcgcgtccgtgcgcggcgtctcagggtctacctcgccgtcgaccatgcagCccccgaacAaggtccaagtgtactgcttcgaggtccttttattcaatcagtgcttttcgagttttatgatttattcatgacaataccagcatggacaacgttccgaggggaaaaccagtcattttgatttctgacagtgaagatggtaaaccAaattctttttcctacttatcatgtcctttcttctttgtttcgaactaaaatggtgcttacaaACcAaaaacacgggaaatattattgtagatgatgatgaagttgctaagatatatcaaagcatgcgcaagtgctccattgaaagaggtgattattttcatataaataattaataagtccaaatgtacagaatgttaggtactgctagtcagatgatgtgcatgtcaaacttccaatttcaggtcaatacggacctcgcaccttctctggatttgataggtactgctggtatgggactgaacatgcagtacaaaattgctcacattgctgtaagcaatttgcctaccattccaccctaTGtgtatgagatccagatgactaatttgacaaaagggaaaatggtatggttcacagatctgactgccctgtatttgcatttgtttatacataaatgtcctgagtctaaatgtcttgtttatatttttcaggccttcagtttgccatttagcaagcagtacataaacaaccacctttcaacatcaattgatgatttacctgtgactttggttggatcagctaaatcctttgagatgagactgaagaaatccaaagataagcgggctacctttacaactggatga
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| CDS seq | atggtcaatacggacctcgcaccttctctggatttgataggtactgctggtatgggactgaacatgcagtacaaaattgctcacattgctgccttcagtttgccatttagcaagcagtacataaacaaccacctttcaacatcaattgatgatttacctgtgactttggttggatcagctaaatcctttgagatgagactgaagaaatccaaagataagcgggctacctttacaactggatga |
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| Protein seq | MVNTDLAPSLDLIGTAGMGLNMQYKIAHIAAFSLPFSKQYINNHLSTSIDDLPVTLVGSAKSFEMRLKKSKDKRATFTTG |
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| Function | B3 domain-containing protein Os03g0164300 [UniProtKB/Swiss-Prot:B7EIH2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_04g0006970 | OsNaBo_04g0006970.01 | Chr04 | 12987732 | 12988852 | + | NAM | ||
| CDS seq | atggtcaatacggacctcgcaccttctctggatttgataggtactgctggtatgggactgaacatgcagtacaaaattgctcacattgctgccttcagtttgccatttagcaagcagtacataaacaaccacctttcaacatcaattgatgatttacctgtgactttggttggatcagctaaatcctttgagatgagactgaagaaatccaaagataagcgggctacctttacaactggatga
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| Protein seq | MVNTDLAPSLDLIGTAGMGLNMQYKIAHIAAFSLPFSKQYINNHLSTSIDDLPVTLVGSAKSFEMRLKKSKDKRATFTTG |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g46690 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0022670 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0021500 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0211000 | RBH | 0 | 0 | 0.96653 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0022000 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0021830 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0007040 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0022340 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G021750 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0021670 | RBH | 0.0 | 0.0 | 0.0 |
