Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_04g0003020 | OGI:04011900 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr04:4817005-4819350 | ||||||||
| Gene Symbol | RLCK132, OsRLCK132, - | ||||||||||
| DNA seq | tcaagtcgaagcagggccacccaagatagtttgaagtaatcttggcacttggggcatgtcaggttctacaaggccctctagaacctgaaccacttcacccatcgtcggtcgattaaagtcgtcatcttgaatgcaccaacatgcaaccttgcaagctctttcaacctcctccatgttcatatcaccatataattggtgatcgaccaaactccccacatctccctttataagcttacgcgcaacttgcataggaaaataaacaacctgatcaccggtgcttttacattcatcaagtgtgttccgccttcccgatatgatttctaacagtaccattccatagctgtagacatcaaccttttgtgtaatagccactccacttatccatttaggtgcaagataccctatggtacccctcattgttgttagaactcgactgaagtcccttcctagtagttttgccattccaaagtctgcaaccttaggaacaaatgacgtatcaagaagtatgttttctggcttaatatcacagtgtatgatgcagtcatggcaactctgatgcaagtaggacaatccttttgcaacccctatggctatctggtaccttgtactccaatttagaattgtaccattgcttcgaaacaaatgagtatcaagagaccgatttaccatatgttcataaacaagcatccttctatcaccttcacaacagaagccaattagtttaactaagttcacatgttggatcatcccaattgtactgacctcagccctgaactgtttctccccttggcgtgcaccatcaagcatctttactgctatagttgttgagtcgtttagaattcctttaaatacagaaccaaaacttcctccacctagcttcgttgagaaatttttagttgcacgctgcaaatcagcatacctaaaagctacaatcccagcaccttctttaatttcattcattcgatggtcacatgacctcctcttgctcctccaaatcatcaatagcaggatgaacgccaagtaattgaaaacagaaacagatgcgccaacagcaacaccaatgatttttccgcttctactatgtccccaactttgcacctctgcagaagcaagacggaggtaaagaatatcttcatttgtattggtagtgccattatattgctttacattaataagttgatcatgccatactgagcagctacttttgccataggaatatgcggtgcaagagcagtttcttagacaaacctgcatacattcgtgtgcacttgcaacagtttccatagtatgagcatcatagggcaatctaacactaggtatgggaaagaacttatcggttaaacctgttgtagttttgttgccgctgcagtctactggaatatttcttgtgcagccttctcgtctgtcatcaaggtcccagtcccttggtgacttgacagagaagcccttcatgtagttgcacaatgtaagtgcgttgttgttgcagactgtgaaaggtccacaaacagagaaaacatcgcatgaatccttgggttggatgtacaccgtctcccaatcttataattcttcaacccagagaagctgctttgtaaggccagatacatcaagtaaacagattgtgattaccgttttatcaaatggggtgtaagtaaggtactcctcttcatcgttgtcaacgattttggggtcagcaaaagcattgactcccatctctggcaccgagttgaagtatcttccgttccactccccggtgttaaagtacaccatggacgagttgcaaagcttatcatagaattgcttagaaccagaggggtctaactccatgcaatataaccctagagccgggtcctcagaattcttctttgaagttaaactatatttctgaccagtgatcttgttctggccaatatttgctccagggagtaagacatctgttgggtgatcaaagctctgccaccacacattggatggatttgaggcatctagtatgacaaggtttccattgtctgacaacactactataatgttcctactggtttttgttctattctcaatttgactagaccaaatcattgagttggctaccttatttaagatgacaagattgccatctcttgagacgctgagttctgacagtttgaagatggggccagctattggtttatctctattagcaacccacacagttgtgaatttagagatgttgttgaaccatattcccagataccagttgggtaaggtggtgttgtctgatgacttactgctgcctgtttggaagaagccgagcgcaaacttgccgttgcttgagatgagcttgtttccaccgacgagcacttggcctgccat
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| CDS seq | atggcaggccaagtgctcgtcggtggaaacaagctcatctcaagcaacggcaagtttgcgctcggcttcttccaaacaggcagcagtaagtcatcagacaacaccaccttacccaactggtatctgggaatatggttcaacaacatctctaaattcacaactgtgtgggttgctaatagagataaaccaatagctggccccatcttcaaactgtcagaactcagcgtctcaagagatggcaatcttgtcatcttaaataaggtagccaactcaatgatttggtctagtcaaattgagaatagaacaaaaaccagtaggaacattatagtagtgttgtcagacaatggaaaccttgtcatactagatgcctcaaatccatccaatgtgtggtggcagagctttgatcacccaacagatgtcttactccctggagcaaatattggccagaacaagatcactggtcagaaatatagtttaacttcaaagaagaattctgaggacccggctctagggttatattgcatggagttagacccctctggttctaagcaattctatgataagctttgcaactcgtccatggtgtactttaacaccggggagtggaacggaagatacttcaactcggtgccagagatgggagtcaatgcttttgctgaccccaaaatcgttgacaacgatgaagaggagtaccttacttacaccccatttgataaaacgacggtgtacatccaacccaaggattcatgcgatgttttctctgtttgtggacctttcacagtctgcaacaacaacgcacttacattgtgcaactacatgaagggcttctctgtcaagtcaccaagggactgggaccttgatgacagacgagaaggctgcacaagaaatattccagtagactgcagcggcaacaaaactacaacaggtttaaccgataagttctttcccatacctagtgttagattgccctatgatgctcatactatggaaactgttgcaagtgcacacgaatgtatgcaggtttgtctaagaaactgctcttgcaccgcatattcctatggcaaaagtagctgctcagtatggcatgatcaacttattaatgtaaagcaatataatggcactaccaatacaaatgaagatattctttacctccgtcttgcttctgcagaggtgcaaagttggggacatagtagaagcggaaaaatcattggtgttgctgttggcgcatctgtttctgttttcaattacttggcgttcatcctgctattgatgatttggaggagcaagaggaggtcatgtgaccatcgaatgaatgaaattaaagaaggtgctgggattgtagcttttaggtatgctgatttgcagcgtgcaactaaaaatttctcaacgaagctaggtggaggaagttttggttctgtatttaaaggaattctaaacgactcaacaactatagcagtaaagatgcttgatggtgcacgccaaggggagaaacagttcagggctgaggtcagtacaattgggatgatccaacatgtgaacttagttaaactaattggcttctgttgtgaaggtgatagaaggatgcttgtttatgaacatatggtaaatcggtctcttgatactcatttgtttcgaagcaatggtacaattctaaattggagtacaaggtaccagatagccataggggttgcaaaaggattgtcctacttgcatcagagttgccatgactgcatcatacactgtgatattaagccagaaaacatacttcttgatacgtcatttgttcctaaggttgcagactttggaatggcaaaactactaggaagggacttcagtcgagttctaacaacaatgaggggtaccatagggtatcttgcacctaaatggataagtggagtggctattacacaaaaggttgatgtctacagctatggaatggtactgttagaaatcatatcgggaaggcggaacacacttgatgaatgtaaaagcaccggtgatcaggttgtttattttcctatgcaagttgcgcgtaagcttataaagggagatgtggggagtttggtcgatcaccaattatatggtgatatgaacatggaggaggttgaaagagcttgcaaggttgcatgttggtgcattcaagatgacgactttaatcgaccgacgatgggtgaagtggttcaggttctagagggccttgtagaacctgacatgccccaagtgccaagattacttcaaactatcttgggtggccctgcttcgacttga
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| Protein seq | MAGQVLVGGNKLISSNGKFALGFFQTGSSKSSDNTTLPNWYLGIWFNNISKFTTVWVANRDKPIAGPIFKLSELSVSRDGNLVILNKVANSMIWSSQIENRTKTSRNIIVVLSDNGNLVILDASNPSNVWWQSFDHPTDVLLPGANIGQNKITGQKYSLTSKKNSEDPALGLYCMELDPSGSKQFYDKLCNSSMVYFNTGEWNGRYFNSVPEMGVNAFADPKIVDNDEEEYLTYTPFDKTTVYIQPKDSCDVFSVCGPFTVCNNNALTLCNYMKGFSVKSPRDWDLDDRREGCTRNIPVDCSGNKTTTGLTDKFFPIPSVRLPYDAHTMETVASAHECMQVCLRNCSCTAYSYGKSSCSVWHDQLINVKQYNGTTNTNEDILYLRLASAEVQSWGHSRSGKIIGVAVGASVSVFNYLAFILLLMIWRSKRRSCDHRMNEIKEGAGIVAFRYADLQRATKNFSTKLGGGSFGSVFKGILNDSTTIAVKMLDGARQGEKQFRAEVSTIGMIQHVNLVKLIGFCCEGDRRMLVYEHMVNRSLDTHLFRSNGTILNWSTRYQIAIGVAKGLSYLHQSCHDCIIHCDIKPENILLDTSFVPKVADFGMAKLLGRDFSRVLTTMRGTIGYLAPKWISGVAITQKVDVYSYGMVLLEIISGRRNTLDECKSTGDQVVYFPMQVARKLIKGDVGSLVDHQLYGDMNMEEVERACKVACWCIQDDDFNRPTMGEVVQVLEGLVEPDMPQVPRLLQTILGGPAST |
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| Function | G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 [UniProtKB/Swiss-Prot:O64477] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_04g0003020 | OsNaBo_04g0003020.01 | Chr04 | 4817005 | 4819350 | - | NAM | ||
| CDS seq | atggcaggccaagtgctcgtcggtggaaacaagctcatctcaagcaacggcaagtttgcgctcggcttcttccaaacaggcagcagtaagtcatcagacaacaccaccttacccaactggtatctgggaatatggttcaacaacatctctaaattcacaactgtgtgggttgctaatagagataaaccaatagctggccccatcttcaaactgtcagaactcagcgtctcaagagatggcaatcttgtcatcttaaataaggtagccaactcaatgatttggtctagtcaaattgagaatagaacaaaaaccagtaggaacattatagtagtgttgtcagacaatggaaaccttgtcatactagatgcctcaaatccatccaatgtgtggtggcagagctttgatcacccaacagatgtcttactccctggagcaaatattggccagaacaagatcactggtcagaaatatagtttaacttcaaagaagaattctgaggacccggctctagggttatattgcatggagttagacccctctggttctaagcaattctatgataagctttgcaactcgtccatggtgtactttaacaccggggagtggaacggaagatacttcaactcggtgccagagatgggagtcaatgcttttgctgaccccaaaatcgttgacaacgatgaagaggagtaccttacttacaccccatttgataaaacgacggtgtacatccaacccaaggattcatgcgatgttttctctgtttgtggacctttcacagtctgcaacaacaacgcacttacattgtgcaactacatgaagggcttctctgtcaagtcaccaagggactgggaccttgatgacagacgagaaggctgcacaagaaatattccagtagactgcagcggcaacaaaactacaacaggtttaaccgataagttctttcccatacctagtgttagattgccctatgatgctcatactatggaaactgttgcaagtgcacacgaatgtatgcaggtttgtctaagaaactgctcttgcaccgcatattcctatggcaaaagtagctgctcagtatggcatgatcaacttattaatgtaaagcaatataatggcactaccaatacaaatgaagatattctttacctccgtcttgcttctgcagaggtgcaaagttggggacatagtagaagcggaaaaatcattggtgttgctgttggcgcatctgtttctgttttcaattacttggcgttcatcctgctattgatgatttggaggagcaagaggaggtcatgtgaccatcgaatgaatgaaattaaagaaggtgctgggattgtagcttttaggtatgctgatttgcagcgtgcaactaaaaatttctcaacgaagctaggtggaggaagttttggttctgtatttaaaggaattctaaacgactcaacaactatagcagtaaagatgcttgatggtgcacgccaaggggagaaacagttcagggctgaggtcagtacaattgggatgatccaacatgtgaacttagttaaactaattggcttctgttgtgaaggtgatagaaggatgcttgtttatgaacatatggtaaatcggtctcttgatactcatttgtttcgaagcaatggtacaattctaaattggagtacaaggtaccagatagccataggggttgcaaaaggattgtcctacttgcatcagagttgccatgactgcatcatacactgtgatattaagccagaaaacatacttcttgatacgtcatttgttcctaaggttgcagactttggaatggcaaaactactaggaagggacttcagtcgagttctaacaacaatgaggggtaccatagggtatcttgcacctaaatggataagtggagtggctattacacaaaaggttgatgtctacagctatggaatggtactgttagaaatcatatcgggaaggcggaacacacttgatgaatgtaaaagcaccggtgatcaggttgtttattttcctatgcaagttgcgcgtaagcttataaagggagatgtggggagtttggtcgatcaccaattatatggtgatatgaacatggaggaggttgaaagagcttgcaaggttgcatgttggtgcattcaagatgacgactttaatcgaccgacgatgggtgaagtggttcaggttctagagggccttgtagaacctgacatgccccaagtgccaagattacttcaaactatcttgggtggccctgcttcgacttga
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| Protein seq | MAGQVLVGGNKLISSNGKFALGFFQTGSSKSSDNTTLPNWYLGIWFNNISKFTTVWVANRDKPIAGPIFKLSELSVSRDGNLVILNKVANSMIWSSQIENRTKTSRNIIVVLSDNGNLVILDASNPSNVWWQSFDHPTDVLLPGANIGQNKITGQKYSLTSKKNSEDPALGLYCMELDPSGSKQFYDKLCNSSMVYFNTGEWNGRYFNSVPEMGVNAFADPKIVDNDEEEYLTYTPFDKTTVYIQPKDSCDVFSVCGPFTVCNNNALTLCNYMKGFSVKSPRDWDLDDRREGCTRNIPVDCSGNKTTTGLTDKFFPIPSVRLPYDAHTMETVASAHECMQVCLRNCSCTAYSYGKSSCSVWHDQLINVKQYNGTTNTNEDILYLRLASAEVQSWGHSRSGKIIGVAVGASVSVFNYLAFILLLMIWRSKRRSCDHRMNEIKEGAGIVAFRYADLQRATKNFSTKLGGGSFGSVFKGILNDSTTIAVKMLDGARQGEKQFRAEVSTIGMIQHVNLVKLIGFCCEGDRRMLVYEHMVNRSLDTHLFRSNGTILNWSTRYQIAIGVAKGLSYLHQSCHDCIIHCDIKPENILLDTSFVPKVADFGMAKLLGRDFSRVLTTMRGTIGYLAPKWISGVAITQKVDVYSYGMVLLEIISGRRNTLDECKSTGDQVVYFPMQVARKLIKGDVGSLVDHQLYGDMNMEEVERACKVACWCIQDDDFNRPTMGEVVQVLEGLVEPDMPQVPRLLQTILGGPAST
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.045642 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0161850 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g09770 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0161850 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0001990 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0003370 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0000150 | SBH | 0.808031 | 5.019080 | 3.806088 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0003100 | RBH | 0.029347 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0003040 | RBH | 2.125278 | 0.0 | 0.660680 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0066100 | SBH | 0 | 0 | 0.008824 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0003140 | RBH | 0.229986 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0080000 | RBH | 0.172573 | 0 | 0.028245 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0002960 | RBH | 0.190330 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0003180 | RBH | 0.178210 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0003000 | RBH | 5.781416 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0002860 | RBH | 0.606079 | 0.0 | 0.094422 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0002150 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G003230 | RBH | 0.174269 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0012660 | SBH | 0.428041 | 1.303368 | 1.550173 |
