Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsNaBo_04g0002220 | OGI:04011900 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr04:3242930-3245402 | ||||||||
Gene Symbol | RLCK131, OsRLCK131, SDRLK-23 | ||||||||||
DNA seq | atgcaagctgccattgtgttatttgttctatgcttctataatagtcacaccctgagaccctctatatttgttgttcttcatcccagatgccgaaacaccaccacaacagcttgtatatatcaatcctttatattacaccaattgttatctctatctctctcacagacacaaacatcagctgctatgcttcctgttttgatcttgtttgggcttctcttctccctacagtgcaatttccctgcatgctctgccacaaataatggcagtactctcatggcaggccaagtgctcaccggtggaaacaagctcatctcaagcaacggcaagtttgcgctcggcttcttccaaacaggcagcagtaagtcatcagacaacaccatcttgcccaactggtacctaggaatatggttcaacaatatcccaaagttcacaactgtgtgggttgctaatagagataagccaataacttaccccatctttaaacagtcagaactcagagtctcaagagatggcattcttgtcatcttaaacaaggtggccaagtcaatgatttggtctagccaaattgagaatagaccaaaaaccagcaggaacaatagtgtagtgctgttagacaatggaaaccttgtcatacgagatgcctcgaacccatccaatatgtggtggcagagctttgatcacccaaaaagatgtcttcctccctgaagcgaagattggtcggaacaagatcactggtcagaaatatagttttacttcaaaaaagaattccgaggacccagctctaggcttatattacatggagttagacccctctggttctaggcaatactatgataagctttgcaactcgtccactgtgtacttttccaccggggagtggaacggaagatacttcaactcagtgccggagatgtcaagcaatgttttatttgactcccaattcattgacaacaatgaagaggagtactttacttacactccatttgataaaacagtaatcacaatctgcttaattgatgtatctggccttacaaagcagcttctctgggttgaagaattacaagattgggaaacggtgttcatcaaacccaaggcttcatgcgatgtttcctctgtttgtggaccttacacaatctgcaacgataatgcacttacattgtgcaactgcatgaagggcttctctgtgaagtcaccaagggactgggaacttgatgacagacgggaaggctgcacaagaaatattccactgggctgcagcagtaacaaaagcacaacaggtttaactgataagttctttcccgtacctagtgttagattgccctatgatgcccaaagtatcagtatggaaactgttgcaagtgcacacgaatgcatgcaggtttgtctgagaaactgctcttgcaccgcatattcctagggcagaagtggttgctcagtatggcatgaacaacttattaatgtaaagcaatataatggcactagcaatacaaatgaagagattctttacctccgccttgctgatgcagagttgccaagttggggacataatagaagagagaaaataatagctgctgttgttggtgcatctgtttctgctttcagtttcttagccttcctcctgctattgatgatttggatcaaaaggaggtcacgtgattatccaattaaaaaaattaaagaaggtgctgggattgttgctttcaggtatgctcatttgcagtgtgcaaccaaaaatttctccgagaagctaggtggaggaggttttggttttgtattcaaaggaattctgagcaactcaactactatagcagtgaagatgcttgatggtgcacgccaaggggagaaacagtttagggctgaggtcagtacaattgggatgatccaacatgtgaacttagttaaactaattggcttctgttgtgaaggtgatagaaggatgcttgtttatgaacatatggtaaatcggtctcttgatgctcatttgttttgcagcaatggtacaattctgaattggagtacaaggtaccagatagccgtaggggttgctaaaggattgtcctacttgcatgagagttgccatgactgtatcatacactgtgatattaagccagaaaacatactacttgatgcgtcgtttgttcctaaggttgcagactttggaatggcaaaactgctaggaagggacttcagtcgagttctaacaacaatgagaggaaccatagggtatcttgcacctgaatggattagtggattagcaattacacaaaaggttgatgtctatagttatggaatggtattgttggaaatcatatcaggaagatggaacacactcaatgaatgtaaaagcagtggtgatcagactgtttattttcctgtgcaagctgcgcgtaatcttttaaagggagatgtgcggagtttgctcgatcaccaattaaaaggtgatatcaacatggaggaggttgaaagagcttaa
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CDS seq | atgcaagctgccattgtgttatttgttctatgcttctataatagtcacaccctgagaccctctatatttgttgttcttcatcccagatgccgaaacaccaccacaacagcttgtatatatcaatcctttatattacaccaattgttatctctatctctctcacagacacaaacatcagctgctatgcttcctgttttgatcttgtttgggcttctcttctccctacagtgcaatttccctgcatgctctgccacaaataatggcagtactctcatggcaggccaagtgctcaccggtggaaacaagctcatctcaagcaacggcaagtttgcgctcggcttcttccaaacaggcagcagtaagtcatcagacaacaccatcttgcccaactggtacctaggaatatggttcaacaatatcccaaagttcacaactgtgtgggttgctaatagagataagccaataacttaccccatctttaaacagtcagaactcagagtctcaagagatggcattcttgtcatcttaaacaaggtggccaagtcaatgatttggtctagccaaattgagaatagaccaaaaaccagcaggaacaatagtacaatggaaaccttgtcatacgagatgcctcgaacccatccaatatgtggtggcagagctttgatcacccaaaaagatgtcttcctccctgaagcgaagattggtcggaacaagatcactggtcagaaatatagttttacttcaaaaaagaattccgaggacccagctctaggcttatattacatggagttagacccctctggttctaggcaatactatgataagctttgcaactcgtccactgtgtacttttccaccggggagtggaacggaagatacttcaactcagtgccggagatgtcaagcaatgttttatttgactcccaattcattgacaacaatgaagaggagtactttacttacactccatttgataaaacagtaatcacaatctgcttaattgatgtatctggccttacaaagcagcttctctgggttgaagaattacaagattgggaaacggtgttcatcaaacccaaggcttcatgcgatgtttcctctgtttgtggaccttacacaatctgcaacgataatgcacttacattgtgcaactgcatgaagggcttctctgtgaagtcaccaagggactgggaacttgatgacagacgggaaggctgcacaagaaatattccactgggctgcagcagtaacaaaagcacaacaggtttaactgataagttctttcccgtacctagtgttagattgccctatgatgcccaaagtatcagtatggaaactgttgcaagtgcacacgaatgcatgcagtttcttagccttcctcctgctattgatgatttggatcaaaaggagtgtgcaaccaaaaatttctccgagaagctaggtggaggaggttttggttttgtattcaaaggaattctgagcaactcaactactatagcagtgaagatgcttgatggtgcacgccaaggggagaaacagtttagggctgagcaatggtacaattctgaattggagtacaagatagccgtaggggttgctaaaggattgtcctacttgcatgagagttgccatgactgtatcatacactgtgatattaagccagaaaacatactacttgatgcgtcgtttgttcctaaggttgcagactttggaatggcaaaactgctaggaagggacttcagtcgagttctaacaacaatgagaggaaccatagggtatcttgcacctgaatggattagtggattagcaattacacaaaaggttgatgtctatagttatggaatggtattgttggaaatcatatcaggaagatggaacacactcaatgaatgtaaaagcagtggtgatcagactgtttattttcctgtgcaagctgcgcgtaatcttttaaagggagatgtgcggagtttgctcgatcaccaattaaaaggtgatatcaacatggaggaggttgaaagagcttaa
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Protein seq | MQAAIVLFVLCFYNSHTLRPSIFVVLHPRCRNTTTTACIYQSFILHQLLSLSLSQTQTSAAMLPVLILFGLLFSLQCNFPACSATNNGSTLMAGQVLTGGNKLISSNGKFALGFFQTGSSKSSDNTILPNWYLGIWFNNIPKFTTVWVANRDKPITYPIFKQSELRVSRDGILVILNKVAKSMIWSSQIENRPKTSRNNSTMETLSYEMPRTHPICGGRALITQKDVFLPEAKIGRNKITGQKYSFTSKKNSEDPALGLYYMELDPSGSRQYYDKLCNSSTVYFSTGEWNGRYFNSVPEMSSNVLFDSQFIDNNEEEYFTYTPFDKTVITICLIDVSGLTKQLLWVEELQDWETVFIKPKASCDVSSVCGPYTICNDNALTLCNCMKGFSVKSPRDWELDDRREGCTRNIPLGCSSNKSTTGLTDKFFPVPSVRLPYDAQSISMETVASAHECMQFLSLPPAIDDLDQKECATKNFSEKLGGGGFGFVFKGILSNSTTIAVKMLDGARQGEKQFRAEQWYNSELEYKIAVGVAKGLSYLHESCHDCIIHCDIKPENILLDASFVPKVADFGMAKLLGRDFSRVLTTMRGTIGYLAPEWISGLAITQKVDVYSYGMVLLEIISGRWNTLNECKSSGDQTVYFPVQAARNLLKGDVRSLLDHQLKGDINMEEVERA |
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Function | G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 [UniProtKB/Swiss-Prot:O64477] |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsNaBo_04g0002220 | OsNaBo_04g0002220.01 | Chr04 | 3242930 | 3245402 | + | NAM | ||
CDS seq | atgcaagctgccattgtgttatttgttctatgcttctataatagtcacaccctgagaccctctatatttgttgttcttcatcccagatgccgaaacaccaccacaacagcttgtatatatcaatcctttatattacaccaattgttatctctatctctctcacagacacaaacatcagctgctatgcttcctgttttgatcttgtttgggcttctcttctccctacagtgcaatttccctgcatgctctgccacaaataatggcagtactctcatggcaggccaagtgctcaccggtggaaacaagctcatctcaagcaacggcaagtttgcgctcggcttcttccaaacaggcagcagtaagtcatcagacaacaccatcttgcccaactggtacctaggaatatggttcaacaatatcccaaagttcacaactgtgtgggttgctaatagagataagccaataacttaccccatctttaaacagtcagaactcagagtctcaagagatggcattcttgtcatcttaaacaaggtggccaagtcaatgatttggtctagccaaattgagaatagaccaaaaaccagcaggaacaatagtacaatggaaaccttgtcatacgagatgcctcgaacccatccaatatgtggtggcagagctttgatcacccaaaaagatgtcttcctccctgaagcgaagattggtcggaacaagatcactggtcagaaatatagttttacttcaaaaaagaattccgaggacccagctctaggcttatattacatggagttagacccctctggttctaggcaatactatgataagctttgcaactcgtccactgtgtacttttccaccggggagtggaacggaagatacttcaactcagtgccggagatgtcaagcaatgttttatttgactcccaattcattgacaacaatgaagaggagtactttacttacactccatttgataaaacagtaatcacaatctgcttaattgatgtatctggccttacaaagcagcttctctgggttgaagaattacaagattgggaaacggtgttcatcaaacccaaggcttcatgcgatgtttcctctgtttgtggaccttacacaatctgcaacgataatgcacttacattgtgcaactgcatgaagggcttctctgtgaagtcaccaagggactgggaacttgatgacagacgggaaggctgcacaagaaatattccactgggctgcagcagtaacaaaagcacaacaggtttaactgataagttctttcccgtacctagtgttagattgccctatgatgcccaaagtatcagtatggaaactgttgcaagtgcacacgaatgcatgcagtttcttagccttcctcctgctattgatgatttggatcaaaaggagtgtgcaaccaaaaatttctccgagaagctaggtggaggaggttttggttttgtattcaaaggaattctgagcaactcaactactatagcagtgaagatgcttgatggtgcacgccaaggggagaaacagtttagggctgagcaatggtacaattctgaattggagtacaagatagccgtaggggttgctaaaggattgtcctacttgcatgagagttgccatgactgtatcatacactgtgatattaagccagaaaacatactacttgatgcgtcgtttgttcctaaggttgcagactttggaatggcaaaactgctaggaagggacttcagtcgagttctaacaacaatgagaggaaccatagggtatcttgcacctgaatggattagtggattagcaattacacaaaaggttgatgtctatagttatggaatggtattgttggaaatcatatcaggaagatggaacacactcaatgaatgtaaaagcagtggtgatcagactgtttattttcctgtgcaagctgcgcgtaatcttttaaagggagatgtgcggagtttgctcgatcaccaattaaaaggtgatatcaacatggaggaggttgaaagagcttaa
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Protein seq | MQAAIVLFVLCFYNSHTLRPSIFVVLHPRCRNTTTTACIYQSFILHQLLSLSLSQTQTSAAMLPVLILFGLLFSLQCNFPACSATNNGSTLMAGQVLTGGNKLISSNGKFALGFFQTGSSKSSDNTILPNWYLGIWFNNIPKFTTVWVANRDKPITYPIFKQSELRVSRDGILVILNKVAKSMIWSSQIENRPKTSRNNSTMETLSYEMPRTHPICGGRALITQKDVFLPEAKIGRNKITGQKYSFTSKKNSEDPALGLYYMELDPSGSRQYYDKLCNSSTVYFSTGEWNGRYFNSVPEMSSNVLFDSQFIDNNEEEYFTYTPFDKTVITICLIDVSGLTKQLLWVEELQDWETVFIKPKASCDVSSVCGPYTICNDNALTLCNCMKGFSVKSPRDWELDDRREGCTRNIPLGCSSNKSTTGLTDKFFPVPSVRLPYDAQSISMETVASAHECMQFLSLPPAIDDLDQKECATKNFSEKLGGGGFGFVFKGILSNSTTIAVKMLDGARQGEKQFRAEQWYNSELEYKIAVGVAKGLSYLHESCHDCIIHCDIKPENILLDASFVPKVADFGMAKLLGRDFSRVLTTMRGTIGYLAPEWISGLAITQKVDVYSYGMVLLEIISGRWNTLNECKSSGDQTVYFPVQAARNLLKGDVRSLLDHQLKGDINMEEVERA
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Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | 0.0 | 0.0 | 0.0 |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0155500 | SBH | 0.0 | 0.0 | 0.0 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g07200 | RBH | 0.0 | 0.0 | 0.0 |
Nipponbare | IRGSP 1.0 | RAP-db | Os04g0155500 | SBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0001990 | SBH | 0.0 | 0.0 | 0.0 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0002330 | SBH | 0.0 | 0.0 | 0.145085 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0002240 | SBH | 0.0 | 0.0 | 0.0 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0002190 | SBH | 0.0 | 0.0 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0002170 | SBH | 0.0 | 0.0 | 0.0 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0066100 | SBH | 0 | 0 | 0.008824 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0002220 | SBH | 0.0 | 0.036471 | 0.000000 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0064800 | SBH | 0 | 0 | 0.0039505 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0002200 | RBH | 0.0 | 0.0 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0002440 | SBH | 0.0 | 0.0 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0002310 | SBH | 0.0 | 0.0 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0002120 | RBH | 0.0 | 0.000000 | 0.0 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0002240 | RBH | 0.0 | 0.0 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G002310 | SBH | 0.0 | 0.0 | 0.0 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0002300 | RBH | 0.0 | 0.0 | 0.0 |