Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_03g0039660 | OGI:03097220 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr03:37187861-37190808 | ||||||||
| Gene Symbol | SDRLK-60 | ||||||||||
| DNA seq | catctgctaggaccgttcctgtacttatgccatccatagcattctaccgatcaaaatgtaaaacttatagctgcataatgtaaaagacttggttgtcaattttcagggtgttccatgatgcaagctcatgtatttgaactggtgatagacggacgacccttgctgtactttgcagcgcttcaagcaaacttcatcatttttctgcaaattaaacaaggatttctatcagcaaacgacctgacatttcaactaaaaaaagtctgaaatattataattgttaaaattagaaaaattagctaggttcttttgtgcctgttgacaaagagttgttctgtaatgggtatctgctatcaaatgtttttttccctttacacaatcaatgaggtttcttctgatcacaccttttgctaagtgccacttctcaaatactctggatctattcagtagattcagattgcactctgcttatcaacagtttttttttaaaaaaaaaaatgttacaggtagacctcttttttttttgccttttacttactcagaattatgcttgcagctcatgttagtgactgcgaatatgatgcagggggtgggggctggtgaacttcgatggcaccttcaatcataagagcaacactcttcatcgctggtcgcatcacaggttcactctgtgtgcaccaaatgccgacgttcaccattctcaccagctcagcttcgtcgacaccatctgccaccttgccagcatcaccaaacatcacacactcatatgcccactcggaaatgttgtactcctccccagcccgcttcagatccatgcttttcttacagcttatgacctccagaagcatgatcccgtagctgtacacgtctgccttcacggtgattgctctgttcttgctccactccggtgctagatagccccgggttcctcggatgccggtgaatgtctttgtttggttcccaatcagtagctttgctagcccaaagtcagcaatcttagctatccccaaactgtcaatgagtatgttctctggcttgatatcgcagtggattattgggccctctatctctgaatgcaggtattgcaaccctctggcaacatctagtgcaattgcaaccctcttgctccaggcaggggaggcatctgagtgaaagaggaggtttgccagggatccatttggcatgtactcatacacaagcaggcgatgaatgccctcattgcagaaaccaagcaatcgcagcaggttccggtggtgtgttcttgcaatcacacgcacttccctgttaaattcacgctgaccatcctcagccatcttttcgagcctcttcacagcgatgtcctggttggtgtcggccacgacacctttgaataccgtcccgtatgcccccttgccaagctcttcgccgaaaccatttgttgccaaatctagttcctggaaagaataggatctgaggccaacaatgttcccatcaatcctggagtcctcttgccgtggtgccgtcatcgtcatgtgcgccaatgatcgccgatgcctgcagataagtaatagagatgccactaatagcacaaacagagaaaagatggccaaggaaacccctgatatcaatgcagaatttgcatggatactcatagccctttggcgagtaccggatatggtctggtaagtgtagatcttcacaaagagtgtggtgttaccaggcatcctgccatatctaatgggaagcatctgttttgagcagtaggaatcactaaacatggcgatatcgcaagcacaatcggagaggcaaagtagtttgcaggcttcaatactagttgtggctggtagaacagcatacgggttctctaaccaagtagtgttcttcacttcgaccatcgtggttgtcactctcgtctcatcgttagagctgttcctcacgcagccaccggttggcaatgctctccaacaaccaagtgtgctctggttagtgctcaagaattcaaaaccaggaaggcaagagcagcttgtctctccagtcacggtgagatggcagaagctattcggaccacaaacacctttcacaaggcagcgatcactgccaggctcaagccactcaacctctgttgtaggtgccctgccaagcttaaagaaaacatgtgagtagagtcgtaggatgccgtcgggatcaaatgtcagacgatagtaaatttccatatcaggggaggcattggaaggctggttggcatggaacagtatctttgtataggagtttttcctgtcgaacatccatatggtaccattaggatctaaggaaagcgtgaggaggaggcccatgttgaaagtccaggtagaccagtacgcactaccagagtcaatggtgcctgttgggtacatcacaagattgccatcttgttggttctcaagcctatacttgtcactggcatgattactctgagagacacctgaaagaagaaatctgcctggacgcaagttctgacctgccaacaatgtgtctgtcggaaaactgaaagtagaccatatgacctgtctgttcatatcatacagtacaaagttgccggtgttcaacatggcagcagaggcagcaggtgtagaactgtcagatatggggttcagttggctacctggagttgatggagttcgtgaccattggagcgcaccaccatgcccaaatatgatagaaccaccagcaattgggggctcatcacggttggcagtccacacaattgtccttgacacaccaatcacaagccacaccccaatagaaaagccttcgccgttgggatagaagccgaacgcaaagcggcctgaagaggaggaccagtactgggtgctgcttgtgttgatagaggatcccaaagtaatgaatgactcattggctgaagctccagcagcaaaattggggtcttcaggaaccaagagcagcagggataggaagagaatatgtgggaacat
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| CDS seq | atgttcccacatattctcttcctatccctgctgctcttggttcctgaagaccccaattttgctgctggagcttcagccaatgagtcattcattactttgggatcctctatcaacacaagcagcacccagtactggtcctcctcttcaggccgctttgcgttcggcttctatcccaacggcgaaggcttttctattggggtgtggcttgtgattggtgtgtcaaggacaattgtgtggactgccaaccgtgatgagcccccaattgctggtggttctatcatatttgggcatggtggtgcgctccaatggtcacgaactccatcaactccaggtagccaactgaaccccatatctgacagttctacacctgctgcctctgctgccatgttgaacaccggcaactttgtactgtatgatatgaacagacaggtcatatggtctactttcagttttccgacagacacattgttggcaggtcagaacttgcgtccaggcagatttcttctttcaggtgtctctcagagtaatcatgccagtgacaagtataggcttgagaaccaacaagatggcaatcttgtgatgtacccaacaggcaccattgactctggtagtgcgtactggtctacctggactttcaacatgggcctcctcctcacgctttccttagatcctaatggtaccatatggatgttcgacaggaaaaactcctatacaaagatactgttccatgccaaccagccttccaatgcctcccctgatatggaaatttactatcgtctgacatttgatcccgacggcatcctacgactctactcacatgttttctttaagcttggcagggcacctacaacagaggttgagtggcttgagcctggcagtgatcgctgccttgtgaaaggtgtttgtggtccgaatagcttctgccatctcaccgtgactggagagacaagctgctcttgccttcctggttttgaattcttgagcactaaccagagcacacttggttgttggagagcattgccaaccggtggctgcgtgaggaacagctctaacgatgagacgagagtgacaaccacgatggtcgaagtgaagaacactacttggttagagaacccgtatgctgttctaccagccacaactagtattgaagcctgcaaactactttgcctctccgattgtgcttgcgatatcgccatgtttagtgattcctactgctcaaaacagatgcttcccattagatatggcaggatgcctggtaacaccacactctttgtgaagatctacacttaccagaccatatccggtactcgccaaagggctatgagtatccatgcaaattctgcattgatatcaggggtttccttggccatcttttctctgtttgtgctattagtggcatctctattacttatctgcaggcatcggcgatcattggcgcacatgacgatgacggcaccacggcaagaggactccaggattgatgggaacattgttggcctcagatcctattctttccaggaactagatttggcaacaaatggtttcggcgaagagcttggcaagggggcatacgggacggtattcaaaggtgtcgtggccgacaccaaccaggacatcgctgtgaagaggctcgaaaagatggctgaggatggtcagcgtgaatttaacagggaagtgcgtgtgattgcaagaacacaccaccggaacctgctgcgattgcttggtttctgcaatgagggcattcatcgcctgcttgtgtatgagtacatgccaaatggatccctggcaaacctcctctttcactcagatgcctcccctgcctggagcaagagggttgcaattgcactagatgttgccagagggttgcaatacctgcattcagagatagagggcccaataatccactgcgatatcaagccagagaacatactcattgacagtttggggatagctaagattgctgactttgggctagcaaagctactgattgggaaccaaacaaagacattcaccggcatccgaggaacccggggctatctagcaccggagtggagcaagaacagagcaatcaccgtgaaggcagacgtgtacagctacgggatcatgcttctggaggtcataagctgtaagaaaagcatggatctgaagcgggctggggaggagtacaacatttccgagtgggcatatgagtgtgtgatgtttggtgatgctggcaaggtggcagatggtgtcgacgaagctgagctggtgagaatggtgaacgtcggcatttggtgcacacagagtgaacctgtgatgcgaccagcgatgaagagtgttgctcttatgattgaaggtgccatcgaaaaaaatgatgaagtttgcttgaagcgctgcaaagtacagcaagggtcgtccgtctatcaccagttcaaatacatgagcttgcatcatggaacaccctga
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| Protein seq | MFPHILFLSLLLLVPEDPNFAAGASANESFITLGSSINTSSTQYWSSSSGRFAFGFYPNGEGFSIGVWLVIGVSRTIVWTANRDEPPIAGGSIIFGHGGALQWSRTPSTPGSQLNPISDSSTPAASAAMLNTGNFVLYDMNRQVIWSTFSFPTDTLLAGQNLRPGRFLLSGVSQSNHASDKYRLENQQDGNLVMYPTGTIDSGSAYWSTWTFNMGLLLTLSLDPNGTIWMFDRKNSYTKILFHANQPSNASPDMEIYYRLTFDPDGILRLYSHVFFKLGRAPTTEVEWLEPGSDRCLVKGVCGPNSFCHLTVTGETSCSCLPGFEFLSTNQSTLGCWRALPTGGCVRNSSNDETRVTTTMVEVKNTTWLENPYAVLPATTSIEACKLLCLSDCACDIAMFSDSYCSKQMLPIRYGRMPGNTTLFVKIYTYQTISGTRQRAMSIHANSALISGVSLAIFSLFVLLVASLLLICRHRRSLAHMTMTAPRQEDSRIDGNIVGLRSYSFQELDLATNGFGEELGKGAYGTVFKGVVADTNQDIAVKRLEKMAEDGQREFNREVRVIARTHHRNLLRLLGFCNEGIHRLLVYEYMPNGSLANLLFHSDASPAWSKRVAIALDVARGLQYLHSEIEGPIIHCDIKPENILIDSLGIAKIADFGLAKLLIGNQTKTFTGIRGTRGYLAPEWSKNRAITVKADVYSYGIMLLEVISCKKSMDLKRAGEEYNISEWAYECVMFGDAGKVADGVDEAELVRMVNVGIWCTQSEPVMRPAMKSVALMIEGAIEKNDEVCLKRCKVQQGSSVYHQFKYMSLHHGTP |
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| Function | G-type lectin S-receptor-like serine/threonine-protein kinase LECRK3 [UniProtKB/Swiss-Prot:Q0JEU6] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_03g0039660 | OsNaBo_03g0039660.01 | Chr03 | 37187861 | 37190808 | - | NAM | ||
| CDS seq | atgttcccacatattctcttcctatccctgctgctcttggttcctgaagaccccaattttgctgctggagcttcagccaatgagtcattcattactttgggatcctctatcaacacaagcagcacccagtactggtcctcctcttcaggccgctttgcgttcggcttctatcccaacggcgaaggcttttctattggggtgtggcttgtgattggtgtgtcaaggacaattgtgtggactgccaaccgtgatgagcccccaattgctggtggttctatcatatttgggcatggtggtgcgctccaatggtcacgaactccatcaactccaggtagccaactgaaccccatatctgacagttctacacctgctgcctctgctgccatgttgaacaccggcaactttgtactgtatgatatgaacagacaggtcatatggtctactttcagttttccgacagacacattgttggcaggtcagaacttgcgtccaggcagatttcttctttcaggtgtctctcagagtaatcatgccagtgacaagtataggcttgagaaccaacaagatggcaatcttgtgatgtacccaacaggcaccattgactctggtagtgcgtactggtctacctggactttcaacatgggcctcctcctcacgctttccttagatcctaatggtaccatatggatgttcgacaggaaaaactcctatacaaagatactgttccatgccaaccagccttccaatgcctcccctgatatggaaatttactatcgtctgacatttgatcccgacggcatcctacgactctactcacatgttttctttaagcttggcagggcacctacaacagaggttgagtggcttgagcctggcagtgatcgctgccttgtgaaaggtgtttgtggtccgaatagcttctgccatctcaccgtgactggagagacaagctgctcttgccttcctggttttgaattcttgagcactaaccagagcacacttggttgttggagagcattgccaaccggtggctgcgtgaggaacagctctaacgatgagacgagagtgacaaccacgatggtcgaagtgaagaacactacttggttagagaacccgtatgctgttctaccagccacaactagtattgaagcctgcaaactactttgcctctccgattgtgcttgcgatatcgccatgtttagtgattcctactgctcaaaacagatgcttcccattagatatggcaggatgcctggtaacaccacactctttgtgaagatctacacttaccagaccatatccggtactcgccaaagggctatgagtatccatgcaaattctgcattgatatcaggggtttccttggccatcttttctctgtttgtgctattagtggcatctctattacttatctgcaggcatcggcgatcattggcgcacatgacgatgacggcaccacggcaagaggactccaggattgatgggaacattgttggcctcagatcctattctttccaggaactagatttggcaacaaatggtttcggcgaagagcttggcaagggggcatacgggacggtattcaaaggtgtcgtggccgacaccaaccaggacatcgctgtgaagaggctcgaaaagatggctgaggatggtcagcgtgaatttaacagggaagtgcgtgtgattgcaagaacacaccaccggaacctgctgcgattgcttggtttctgcaatgagggcattcatcgcctgcttgtgtatgagtacatgccaaatggatccctggcaaacctcctctttcactcagatgcctcccctgcctggagcaagagggttgcaattgcactagatgttgccagagggttgcaatacctgcattcagagatagagggcccaataatccactgcgatatcaagccagagaacatactcattgacagtttggggatagctaagattgctgactttgggctagcaaagctactgattgggaaccaaacaaagacattcaccggcatccgaggaacccggggctatctagcaccggagtggagcaagaacagagcaatcaccgtgaaggcagacgtgtacagctacgggatcatgcttctggaggtcataagctgtaagaaaagcatggatctgaagcgggctggggaggagtacaacatttccgagtgggcatatgagtgtgtgatgtttggtgatgctggcaaggtggcagatggtgtcgacgaagctgagctggtgagaatggtgaacgtcggcatttggtgcacacagagtgaacctgtgatgcgaccagcgatgaagagtgttgctcttatgattgaaggtgccatcgaaaaaaatgatgaagtttgcttgaagcgctgcaaagtacagcaagggtcgtccgtctatcaccagttcaaatacatgagcttgcatcatggaacaccctga
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| Protein seq | MFPHILFLSLLLLVPEDPNFAAGASANESFITLGSSINTSSTQYWSSSSGRFAFGFYPNGEGFSIGVWLVIGVSRTIVWTANRDEPPIAGGSIIFGHGGALQWSRTPSTPGSQLNPISDSSTPAASAAMLNTGNFVLYDMNRQVIWSTFSFPTDTLLAGQNLRPGRFLLSGVSQSNHASDKYRLENQQDGNLVMYPTGTIDSGSAYWSTWTFNMGLLLTLSLDPNGTIWMFDRKNSYTKILFHANQPSNASPDMEIYYRLTFDPDGILRLYSHVFFKLGRAPTTEVEWLEPGSDRCLVKGVCGPNSFCHLTVTGETSCSCLPGFEFLSTNQSTLGCWRALPTGGCVRNSSNDETRVTTTMVEVKNTTWLENPYAVLPATTSIEACKLLCLSDCACDIAMFSDSYCSKQMLPIRYGRMPGNTTLFVKIYTYQTISGTRQRAMSIHANSALISGVSLAIFSLFVLLVASLLLICRHRRSLAHMTMTAPRQEDSRIDGNIVGLRSYSFQELDLATNGFGEELGKGAYGTVFKGVVADTNQDIAVKRLEKMAEDGQREFNREVRVIARTHHRNLLRLLGFCNEGIHRLLVYEYMPNGSLANLLFHSDASPAWSKRVAIALDVARGLQYLHSEIEGPIIHCDIKPENILIDSLGIAKIADFGLAKLLIGNQTKTFTGIRGTRGYLAPEWSKNRAITVKADVYSYGIMLLEVISCKKSMDLKRAGEEYNISEWAYECVMFGDAGKVADGVDEAELVRMVNVGIWCTQSEPVMRPAMKSVALMIEGAIEKNDEVCLKRCKVQQGSSVYHQFKYMSLHHGTP
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.559774 | 0.0 | 0.604041 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0828800 | RBH | 0.172540 | 0.301019 | 0.210854 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g61310 | RBH | 0.116598 | 0.202317 | 0.054239 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0828800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0040660 | RBH | 0.000000 | 0.0 | 0.247354 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0040330 | RBH | 0.061437 | 0.0 | 0.152578 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0040400 | RBH | 0.567751 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0040620 | RBH | 0.041353 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0040120 | RBH | 1.631896 | 6.705044 | 15.024420 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0593700 | RBH | 0.5243275 | 0.4866635 | 0.470296 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0039870 | RBH | 0.137256 | 0.0 | 0.107445 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0596400 | RBH | 0.7260765 | 0.3968935 | 1.944333 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0040470 | RBH | 0.271485 | 0.354828 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0040370 | RBH | 0.137516 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0040060 | RBH | 1.386808 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0040140 | RBH | 0.422968 | 0.176574 | 0.255410 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0040190 | RBH | 0.130557 | 0.512819 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G039910 | RBH | 0.061556 | 0.255793 | 0.277252 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0008960 | RBH | 0.0 | 0.0 | 0.0 |
