Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_03g0034410 | OGI:03087520 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr03:33613077-33627610 | ||||||||
| Gene Symbol | OsWD40-93, OsCstF50, - | ||||||||||
| DNA seq | agtccagaccagttcctagctccgaacagagtccttctccgaagtgcgaactcgctgcaagccgaatccgccgcgccgccacacggagacgagagggagaggtcgagagggagagggcgagggcgagatggacgcggcggtgcaggaggcgaagctgctgcgccaggtgaacgccctcatcgtggcgcacctccgcgaccacaacctcacgcaggctgccgccgccgtcgccgccgccaccatgacgcccctcgccccgcccgagcccgacggcgacgactccgtccccgccaaccagctcctccgcctcgtcgccaaggtttgctatcactttctcctcgccccccatgtcctcctctcctcgggtggacggggctcgtgcagtgcagcgcagcggaatccggcctaaaccctcgctgtgtcgctgttgttgatggttcgcagggcctcgcggtggagcgggaggagacggggaggggaggaggggcgttcgactctgccgccgccgccgctggatacggtggattgttgccgccgctcggcaccaatgccgtggatttcaggtgttttaatttgctcgtggctctgggcattgacttgttaattttgtgtacttgttgctgctgatcatgtatgaatttgatggtgagtgttcgctggtggtctgtgcagcacgcaggatgttaagggctcatccaagagcttccccaagcacgaggccaggcacgtatctgatcacaaggtgcagatgattagagttctcccttgcgtgatctgccactgaattcattgtttatgccatttccttctatttatctgaatgaaatctaaaaccaactgggcaacttttttttttttttaaaaaaaggcaagatagaagaatttaggagcatatatgtggtaccatttgcaatttgcacttgccatggtattttgctacacatggtcttgctgtagatcctaatagtaatgaatggtgtcttcatttgcttactcttatattgtgtagaatgttgtccgatgtgcaaaatttagtcctgatgggaaatattttgcatccgggagtggtgacacatcaattaagttcttcgaggtgagattgaattggaactcaactactcaagtctctatctgcaggatgggttttttagattttacctattgttcattagtgttctttctcttgcaggttgctaaaataaagcagatgatgctaggggattccaaagatggccctgtccgtcctgtgatccgtacattttacgatcacacgcaggtgagcatgtcattctcatgcatgatagttgtctgtactaccactgcgccctctgttagcaagtatacttatttactttactgcagcccatcaatgatcttgattttcatcctgagagccccatactgatatctgcagcaaaagacaatacaataaggtatgcttaaattggttctctcccacctttggtatttttgttgtgttctgagttgttcatctgggatcaagaatatttaaccaaatgttcacaaatatattgtacattatttaattatgtatttccttgatatacctgcccaacaggttcttcgacttctcaaaaactgttgcaaggaaagcattcagagttattcaggtggtaaaattcttattaatattaaattcaatcttccaagatattctgtaaagtgtgtgctagctgcatccagtcagtgctcttattttcaatatttacttgaacaggacactcacaatgttagatccgtatgttttcatccttgtggggattaccttttagcaggtagtactattatcctttcaccatatggattttacctgtaaacttgctctgttgctctggttatgaggttgtggtattaatttggttaatacgaacttttcttagcctttctttttttggaccaaagataaatcagatgatcgatccagctttactgaaaagccaacagagtcttacagcagaagacaaaagatagcaggtggattttccagcttacaagcatgaacactgagccaaaactacccacatctagactgaagaactacataaacacatcaccactcctttcagtttagttgaaactccaccagctagatcagacagctatcaaacatcacatctgctgcacaatcatatgtcttcaggcaaaatgtccctaggcttcaattcattgagttttgccatgatactactgcaccacttgtccacccgctcgtgatcattgtccttttgaagccttttccaacactaaaaaagaaaataagataaacttataaccccacatgcagtggagatttaactcgtatcccttcaaaaacatagttgtttctggtcatccacaaagaccaacaaaccccttcaagcaagacaattctatttatctgtttagcactacatctgtttatgttaaggatatcctctatggtgcgaagcaagacatttagcttacatacatccctcacagcattccaaacataagtgctaaaggacaatcaaacagaatgtgattagtagtttctcttttcttacacagtttgcaaaagttttagtcaatttctctgataccagatgttatgtggtaggatgaattggggtgctcgacgggaaggcgaggctgctgcagccttgccgccccggagcctaggtgaggccgaacagagaagagtggagactagagataggtttaacttctttcttgattaattccaaatgactacggtgcctctccttatatagagccagctcctaacaaacatcctaacaaccttatctaataaagcctaacaaccttatcttataatgagaggggctgagttctgcccataacatgtgctcattttcgtccttctgccatgtggtgtcccatgtggacttgtagggtcagcaccttctttccaatttagactatgcaagtggctgaaatgcgtgctttgcatcacccgaaaaaacaaataatgaactgcatagggtcatcttacatcgatagtaataaaaattagggcaatgcagttactttatatagtttgttgcatttgagggccctggatattgtctacccgaaccctggatattacctgcctgagaccatctgtgatgtcataagaggcattaccactaaagcctttcttttgtcaaattttattttgtgctgatgaacccatagtacctacatttgaagttggtttcatatcatacctttttattgtatttgatgtgattgtgaagtatataactggtcaatgtgctttttggtattatctggcaaactcttttaatttattgttgagttttagcttgcgtactcattagtactaagcatgtctagattgctaaaaacttcttatgcagtggtttcttgttttctaatgaaaatgaggaaccagggtctaggtccttcattctaaaaactctcaatttatttgactaaaactttttggagttctagactgaggatttcgattttgttgtggaaccaggcattctttgcttctttcatttgatgtaattcccccccccccccccccccccccgccccaagtgaagacgctcatatgaatattgctaacaaactggtaaagatgataacacaaatatgctatccattagctgttttgatcatgcaattgattaagataatttggacagtgccatcctgacctgacaagcaggctgctgccccttagtgcgcacgagctgctcccgatgcaccttctgtgcacagacttatgattccacctgattccttgcaaaacagagagctcagcacgtgctattggtggcccagtcagccagtctgaactaccaagcacctgtattatatgcttgatatttgacaaatatcacaagtctagtttctaccgttttctctgcattcctgctggaagctaatactaacacattaatattcaagcaagtgatgctgatataaacgtttgtagggactgatcacccagtggctcatctatatgatattaacactttcacatgctacttatcggcaaattcacatgattccaatgctgccattaatcaggtattcattttgtgtgaaaggacttatcctggactttttgttaactctagaaagatgtatatttactgtcctagccttagtcactgatgttgatgctaggtccgatactcttctactgggagcctgtatgtgactgcttccaaggatggttctctgcgcatctgggatgggatatccgctgaatgtgtccggcccataattggagcacatgcatctgcagaggttactagtgcaattttcacaaaagatgagaggttagcacgctgccttgttgtataaatgaaaccatgtagcattgctatctgttatggtggcctcaatgttctttcaggtatgtcctatcatgtgggaaggattcttgtataaaattatgggaagttggctctggacgacttgtcaagcaatatgtaggcgctgttcacagacaatttcgatgtcaggtcagcaatgtgcttaccctactatattctctgatttacaccattatatatgttctgttgtcagctaagaactccatcttggttggaactttaaaatgtgagaaaaagagtttgtaatggtaccgattatttatttaatagtattatttttgtggggaggacgggaggtaattgcaccattaacttttctatggtaataattgccttttcatttcaggctgtcttcaaccaaacggaggaatttgtagtatcaaccgatgaacaaaacagtgaggtagatttcaaattcagaccagtatttgtaactttctttcagcattgccaacagaagcctgagtgtgcatatctgtaattctacttcacctccaggttgtcgtctgggatgcacttaccgctgaaaatgtagcaaggttgccctctggccacaccggtgccccgaggtggcttggccactcccctgcagaaccagcctttgttacatgcggtaacgatagatccgtcagattctggaaacaaaccgtgtagaaaatgtagatccaccaacgaatcaacccagaagttggtggtagaattaactaatacattgagattaaaaaaccttgttcatgtgctgttccttaattatttgattagttgtacacttgtacatgctactgaagttgtacactgatgatactgtacccaacttggtaggaaaattttggctcttgttggcattcatgtaagcagaattcagaacttgaaatgcatgttcttttccattgttgccacgactggcatatgcttatgcttttgatgatttgagcgtgtcggaaacttggaaattggaatcgcgaagccctcctgaaatttgagaacttgacaaaccatctgagcgatgaatgaaaggagtgtcaaattatcaaatctctcctccaaaagagaagaacacgcgaatcttctctctttctacatggtcaagttgcgaggtagaagaagagcccagttctgcgaaccgggcccataccactagaggcccatttgggcccaacccgctagattcgagtgaactggctccaactaaactaatttccccaTtttttttttctctctctccccccttccaacgagcacgttccccgtcctcctccgccccacctcgcgtggcacgcccatggccttctccccgcgctcgccgtggtcgcgctccaggaagcccgacgtgtactccaccgtcgtcgtccacggggacgacgacgacgacgacgcccgcggcggcggcggcggcggccgccatgccctcgcggaggatgacgaggaggaggacccgtcgtcgctgcccccgctcctccagcgcctccccaaggacttcggcggcggagcctccttcgacgagtacgacgacccctactcgtcggacctcgacgacgcctcgctctccgccaccgtcgtcgtcaagcgcggcgcccccgcctccacctcggcctcctcccgatccccgttcctggatctgcgccgctccagcccccgtgccgccgaggtcgacccgtactccaccttcgtggtacacggcaccgcccgctccggcggcgcctccagcccgcgggaatctgcctccggcacattcgtccgccgctccggtggttcctccagcccccgcgagtccgtgtccggcacattcatccgccgcacgggcagcccctccagcccccacgagtcgatctccggcaccttcatccaccacaccagcggcgcctctagcccccgcgacactgcccagggtggcggagggtttggttcctcgttctggagccctgcggtggggcagtccgaggagctccggcaaccggcgcttcttgtgcagcagcagcaccagcaacagcagaattcgaggcggaaaccatcggtgagctctgtgccggagagtgttaccagggaggatccttccactaagtatgagctgctccatgagcttggtgcgcctcttgtttgggattatatttcctttttgtttataattcttcccaattattccgagctgtttgcataagcacaactcaattgatgaatgcaggtaaaggttcctatggtgcagtgtacaaagcaagggatctcagaacacaggagcttgtggctatcaagatcatctccttgacagaaGgggttggttttataaatttcagttgagattgtaaataacgtcacactagttagctggcacgtgtacagaatattcaaattataacgtgtatgaaataaagacaaactaaatattctgtctagtcaatagtccctctgttcacgtatatatatcatgtttgtttgttttttttaaaacttgtatttattgtctctaatgcaagagttctactgcacattgtcatgtcatatattacatgattacattttgcaagatgattccagtggcattattgtcatgtagctagtttatatacttcaatcacatattgaattctaaagtttaaaacattgaccacacatgcatgaattccacaatggtctacctatattaggagatatagggagggggtactagccatctaatatggttagaacaaaaacacattttaatacaaaaagtttatcattatttattttcacgacttctttgtttcctactctgccccacttgcatattgacatcgtgttgtgacttgtgagcatttaactttcgtggattaaattgtgactctgacagaatacacaaaaggatatcccattatgacccttcgtgtttcttcaaagtctaaacctgtctttgttatcaggaagaaggatatgaagacatacggggagaaattgagatgctgcagcaatgcagccatccgaatgtcgtccgctacttcgggagctaccaaggagaagaatacctttgggtataatccaatgtcctgataatatattcttataatattttgagatagctacactattcttttttttcctaatatttgtctacttgtgaactcattaattatgtttgatgtgtgcttcaatttgcagatagttatggaatactgtggtggtggaagcgttgctgatttgataggcataacagaggagcctcttgatgaatcccaaatagcttatatatgtagagaagcactaaaggttcatttttttcatacttcatatgactcaattgtatgtaggatttaactattatcttaagtagctatgagctttgctacttttattgcattaaaattcgccatcagatttaacggtattctattaagccggaataattctacagatgacctttagaggcccaacaaaaaactgggcacccttatggtgaccatttccagatattttacttgcatattttctgttgcagggtcttgcttacttgcattcaatttttaaagttcatagagatattaagggtggcaatattctgctaactgagcaaggagaggtgaagttgggtaagtcaagttgttctctggacctctggtatgcttcaattaaattgttagggcttgtttgggtagggataggatgggtgggataaggatggaggtttacactgaagattggtgaaagatggggaggattaccaacttccattttctcaatccctgttccatgcctctatccctgaatccaaatacccagttagtgtttatttgagcctacatctgtgaattttacaagacatctcacgaaacgatgtttcaaacaggcgattttggggtagctgcccagctgacgagaaccatgtcaaagcgcaacacggtattcttctcaattgtgtttgttttgctattgtatacacaaagcttcagaaccttagttgttgattgttgcgacaaaaaaggaagtggctgatactgtgatacagttactgtagcagttaccacaatgggggcgttcccatttgtgcacaaccatttattgctatgttaatttggtgggggaaacgggcatatgtttattttggatagagtatttctccaagctggtcctatcaatttttatgccacttgggttccatcctattatagatggaacaggggatgtacttatggcttgtcccccaaatatcacctcataagtaccctcaccgacccttttcacacgtttccaaccattcagctattgccctgcgctttagtgctatgaggatctatttctttgcctccaggcatgaggtgagagaggtattttgttgcaggctggtaaaattgggggagaagtgggagaaagatggaggggaaaccatggcgcaggcatgtagtgcacaaattttgagctttatgggtgtgtacaaaagggtgacattagctgtctataagagatgtcacagtcgatcttttttatgaggtggaggaaagaggtacaagagagagggagagggagagagtctcagcagaagaaaaaaaagctgtgtggatgtcatctgcattgtgtggcctcatttttctaaatttgtgccatagttaggatcctttacaggttaattgagagttgagataatccattgtgtttattgtctaagaatgacctagatggttagtacagacaacagtagtcgagcaccattgtacatgacataagagtataccatctcttatatctttatgactatgtttctgtcttttttcgtagttgtcgttcatctcttttctatgagcagaataagcagccacttctaaaaaacacacattgactttgtcagatttacataccatgcgctaagactgtatcccgcatacatcagcttgcttatcaccaattttgaatactggaatgttgacttgctaatctactgacatcaaaacacaaagatgtccaaactggcggggatataattctacgagtgcacgaatcattttgctagctactccctccgttccataatataaggcacaactactttttttttatgttccataatataaggcatgcatgcatgcatgcatacaattaattaggacctcttctccattaaattattacttttttttaaattctccatccttagtatctctaattctattggatgcatgcattatatttattagggtgatccaaactaggagatgataataattgtttcttggtctttgggttaagggtggttgtgccttatattttggaatggagggagtaatatttttggggggttgcattttcacaaagcatatatcttaaccgcacacatgcaaatttttgtaattcagtgttttatgtttatgcctgtcagttcattggcactccacattggatggcacctgaggttattcaagaaagtcgctatgatggaaaggtactctctctctctctctctctcatgcacattcacaattatgaatgtgagtgcattgttttccattatatttatataactactccctccttccaaaagtctaagtcctatttgtagtcgctatgtgctaaattaaattgttgatcggaacccaagaagccattttagtacttattggttgcatgttcattggttttgtcacatggtgaatgaattaattacttcttggtcttggtgcaaaaagaaataggacttagactgttggatggagggagtactaggttactgcagatgatgcattctagcaatatttatgcattttgcattcggattaggagcttcgaagtctctgctttgagattctttgcaggaatatttgtctacttggctttggcataaacgttctctttaaaagccacatgaaaaagttgtaccttgggttttggacatataagttttttagtttgtactgtactaaacatgtgatgtcttttttttggtactttccttgatggttcctgaagagaaaagttaatacctgatagtataaacttctaaggaacacaccaatgtcacagcgttgaggaaatacagtttgaattttctccttcttccactgttgtagcaaagctaataatgcatgcttgtttttcccttttcaatatccaggtggatgtgtgggcattaggtgtatctgcaattgaaatggcagaggtaggaaacatcatttggtccttccttttgaaactgtatagttgttcatttaacctactagttctgtgatggataaatatttatccttaatcaaattttttttgtggtgtctctgactgtagggtatgccaccgagatccaccgtgcatccaatgagagtaagaagaagacttcttgattcatttaagtggttataaatttatcatagctactttgatgcattttgctttgaatccctttgctattctatgtatcctggtttcagtgatgaattttcctgctatcagttatttcctctctttttcccaataatgtttcatgcatcattatatttcttttaactatttggttgtattccatggatgcatggatatatcatatattcttaaataagcgaatcgaagctgttgtgatccctgaatcatttgtttcttcacttcttgctatatatttgataaaaccatagatttttttattccatcattctgcttgaaggttgaagcttgagctaattacatatcttttgcccttactgcaggtgatctttatgatatctagtgaacccgcaccaatgctcgaggataaggagaagtggtgagtgccatctaatacaccatgaactgttgtgcttctctgagtacctcagtaccaggaacagctgataagagcatggctataaaactttcagaccagagatcatttcaaggctcctgtttcttttgatctgtgaagaaattataacagtgtcagctgtgacctatttatcaaggaataaactatacattttttttgtgcgtgttggttactatagttagcaggtttcaaaaccgaggctgaaccaattgtccatcaatattattatttccctgcacataacaatttagtcatcacgtatttgacataaattatgattaaactcctctagagcaaaccttatgagccgaaccatttggaatgagctggtggaaaactacggtagaagcatcaatataggtgtctttttaatttatactaattgaggtggcactttgtgaagttcttatatgctaatctcctgcctctataatcaagtgcactgtctgtcatgaattaggagcccatcacaggtacagtttgacacaattgtaccaagcaaatatgttgatgctgatgtagttaacacaaacaagatgcacttcagtcaacagtatcaaccattgactcctttgcctatgttcattccattcaatatatttagattctcatgctttcgtgtggataaggtggctatttttatgtttgccttctaaactattgttgttgtaggttttcaaactctagtcttagatatttatgtcaaaatctaacttgggcatgaacaaatgacaagtgtattctaaaagtagtcaaactttaatttaccccctttgctcatccactaattcttgttattagctatttctttggtcaagggcatcaaatgaaacgttcttgagcattggttggtctaagttcttgttaccctatccttcaggtcccttcttttccatgattttattgccaagtgcttaacaaaagatccaagacttcgcccagctgcaagtgagatgctgaaggtacttcatactagcttaggtcaactttgttatgcattttcatgattatttgttcctacatttaattatgtcactctcatcctctcccaccaattctttatgcagcacaagtttattgaaaaatgcaaccctggagcttcgaaaatgttggcaaaaatcaaggaagcaaagaagatcagagcaaaagtagctgcggagaccgagctatctggccctgacagtgtatgttaaactcgattaatgatatgtgcattgattttttgtcaatgtggtattcttcttttgatgtctgtagacaatgcaggatgcaactgttcgaattaatgatgactttggagaaactgttcctacaaaccctcagcaacaaacaaatcacgaaacatatgatggtggggcaggtaattataagtgatgaccctgcaaatataataaatctatattccctctatatatcctacacatcaatttccgtttttcTtttttggaatctgttgtttcattgggactttcctccttatgcgatctttcgtcaaatgttccattctccctctagggtgctaatgataaacagcaaacctgaaaacctgatatatgatgttcatgagcattaggtatttctggttaactccaattcgtgcaacttcaaaattacttgtccttatgactcttctatataacaaagttttattttgattgagcactcaatattagtgcttgcttttttcccccagtcttgtcctctccacttgaaacaaccactaaatcgtttctccttacaggtgattttggtacaatgatagttcatcctgaagacggcgacgaagttgatgaatcacccatcttcccaagttcagaattcataccaggccttgggagcataaactctttcacacatgatccaaagagggccgagcttatttcaaatttttggtatgataaacagaaaataattttgttctgtatgtttttcattcagaaagcaacatagcaaaaaacgaaaagctttctcccatcagaaataaagtttatgtataacatctttatcagggcggagaacacagctgatattgaagccaataaagagcaatatctagatgaacatcctgatatgcaggaagcaaaaacaatgccaccttcaactggaacggttaaaaagcttaaagttgcagaagggactatgccacgccatggtaatcaagttagctctgcctcaccatgtgttgctagcacaatgaccaaattaaacagcagccccagccgtaaagcattctcagttcaggataaggtatatacttcgtggttggttgcctcagatatttaacgttatagttatgaaccagaccaaaatacttagattagtaatgcagttgtacacccctctcctttaccctgcacaaattgaaaatgcctctataattttcatttttgtagctctggtcaatttatgctgcgggcaacaccgttcctataccattcctcaaggcaattgacatttcaccactagctctagtatcagatagtgtagtaggaaatggcctagctgggtcaaatagaactgatgcattggaggcagttagggagcttttcagtggtgatgggcagacaaagaaagggcgcaaagggcaaaatgaggtatgattcagaccctttttaaagtaatagcactaattctcttgcccatatgtgttgtctctgatattgggtttacttgcattaggttcctcttcctcctggggtgcaccacagattgaccacaagtcccacattgatgaacctggcccaagcccttgcttaccacaaaacgtgagttgtctgcaccgatgtttgttgatctttcttttacacaaaaattaaagtaattgaacagatttttatgcatttcttccataaatatttggcacaggtgttacgaggacatgcctctgcaagattcgcaagcaacgcaagagcagcagacaatacagaacctttgtgatacacttcgaaccatcctgagactctagtctgtggacatgcatgagtaaaagatacgaccttggagcatttcgaacatcgaaatgctgcgccgagtaaagggctgattttggcttctcaatttgatgccgagatcgatccggccagtgtgtagggtaagtctgtaaccaaaagcaggcacggcatggtgcgtactgcagaacaatgctgacggagcttgccattagcttatagatgctgggtgaccttgaagctggataggcggaaggaattcctgttttggagatggaaattttgtctgatgttaatagcaggtatttatgtgggcagtgtatgtagagattgcattcgaccttttgctaatcaaattttgcggctcaaatggtgacgtgtactcaggctttgtaTttttaacatatttcatttgtttttcccaagaataaagagaaatagtattagtacctatggtattctatccgttgtcag
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| CDS seq | atggacgcggcggtgcaggaggcgaagctgctgcgccaggtgaacgccctcatcgtggcgcacctccgcgaccacaacctcacgcaggctgccgccgccgtcgccgccgccaccatgacgcccctcgccccgcccgagcccgacggcgacgactccgtccccgccaaccagctcctccgcctcgtcgccaagggcctcgcggtggagcgggaggagacggggaggggaggaggggcgttcgactctgccgccgccgccgctggatacggtggattgttgccgccgctcggcaccaatgccgtggatttcagcacgcaggatgttaagggctcatccaagagcttccccaagcacgaggccaggcacgtatctgatcacaagaatgttgtccgatgtgcaaaatttagtcctgatgggaaatattttgcatccgggagtggtgacacatcaattaagttcttcgaggttgctaaaataaagcagatgatgctaggggattccaaagatggccctgtccgtcctgtgatccgtacattttacgatcacacgcagcccatcaatgatcttgattttcatcctgagagccccatactgatatctgcagcaaaagacaatacaataaggttcttcgacttctcaaaaactgttgcaaggaaagcattcagagttattcaggtgtggagatttaactcgtatcccttcaaaaacatagttgtttctggtcatccacaaagaccaacaaaccccttcaagcaagacaattctatttatctgtttagcactacatctgtttatgttaaggatatcctctatgggactgatcacccagtggctcatctatatgatattaacactttcacatgctacttatcggcaaattcacatgattccaatgctgccattaatcaggtccgatactcttctactgggagcctgtatgtgactgcttccaaggatggttctctgcgcatctgggatgggatatccgctgaatgtgtccggcccataattggagcacatgcatctgcagaggttactagtgcaattttcacaaaagatgagaggtatgtcctatcatgtgggaaggattcttgtataaaattatgggaagttggctctggacgacttgtcaagcaatatgtaggcgctgttcacagacaatttcgatgtcaggctgtcttcaaccaaacggaggaatttgtagtatcaaccgatgaacaaaacagtgaggttgtcgtctgggatgcacttaccgctgaaaatgtagcaaggttgccctctggccacaccggtgccccgaggtggcttggccactcccctgcagaaccagcctttgttacatgcgttgtacacttgtacatgctactgaagttgtacactgatgatactgtacccaacttggtaggaaaattttggctcttgttggcattcatgaagcccgacgtgtactccaccgtcgtcgtccacggggacgacgacgacgacgacgcccgcggcggcggcggcggcggccgccatgccctcgcggaggatgacgaggaggaggacccgtcgtcgctgcccccgctcctccagcgcctccccaaggacttcggcggcggagcctccttcgacgagtacgacgacccctactcgtcggacctcgacgacgcctcgctctccgccaccgtcgtcgtcaagcgcggcgcccccgcctccacctcggcctcctcccgatccccgttcctggatctgcgccgctccagcccccgtgccgccgaggtcgacccgtactccaccttcgtggtacacggcaccgcccgctccggcggcgcctccagcccgcgggaatctgcctccggcacattcgtccgccgctccggtggttcctccagcccccgcgagtccgtgtccggcacattcatccgccgcacgggcagcccctccagcccccacgagtcgatctccggcaccttcatccaccacaccagcggcgcctctagcccccgcgacactgcccagggtggcggagggtttggttcctcgttctggagccctgcggtggggcagtccgaggagctccggcaaccggcgcttcttgtgcagcagcagcaccagcaacagcagaattcgaggcggaaaccatcggtgagctctgtgccggagagtgttaccagggaggatccttccactaagtatgagctgctccatgagcttggtaaaggttcctatggtgcagtgtacaaagcaagggatctcagaacacaggagcttgtggctatcaagatcatctccttgacagaaGgggaagaaggatatgaagacatacggggagaaattgagatgctgcagcaatgcagccatccgaatgtcgtccgctacttcgggagctaccaaggagaagaatacctttggatagttatggaatactgtggtggtggaagcgttgctgatttgataggcataacagaggagcctcttgatgaatcccaaatagcttatatatgtagagaagcactaaagggtcttgcttacttgcattcaatttttaaagttcatagagatattaagggtggcaatattctgctaactgagcaaggagaggtgaagttgggcgattttggggtagctgcccagctgacgagaaccatgtcaaagcgcaacacgatggaacaggggatgtacttatggcttgtcccccaaatatcacctcataagtaccctcaccgacccttttcacacgtttccaaccattcagctattgccctgcgctttagtgctatgaggatctatttctttgcctccaggcatgaggtgagagaggtggatgtgtgggcattaggtgtatctgcaattgaaatggcagaggtgatctttatgatatctagtgaacccgcaccaatgctcgaggataaggagaagtggtcccttcttttccatgattttattgccaagtgcttaacaaaagatccaagacttcgcccagctgcaagtgagatgctgaagcacaagtttattgaaaaatgcaaccctggagcttcgaaaatgttggcaaaaatcaaggaagcaaagaagatcagagcaaaagtagctgcggagaccgagctatctggccctgacagtacaatgcaggatgcaactgttcgaattaatgatgactttggagaaactgttcctacaaaccctcagcaacaaacaaatcacgaaacatatgatggtggggcaggtgattttggtacaatgatagttcatcctgaagacggcgacgaagttgatgaatcacccatcttcccaagttcagaattcataccaggccttgggagcataaactctttcacacatgatccaaagagggccgagcttatttcaaatttttgggcggagaacacagctgatattgaagccaataaagagcaatatctagatgaacatcctgatatgcaggaagcaaaaacaatgccaccttcaactggaacggttaaaaagcttaaagttgcagaagggactatgccacgccatggtaatcaagttagctctgcctcaccatgtgttgctagcacaatgaccaaattaaacagcagccccagccgtaaagcattctcagttcaggataagctctggtcaatttatgctgcgggcaacaccgttcctataccattcctcaaggcaattgacatttcaccactagctctagtatcagatagtgtagtaggaaatggcctagctgggtcaaatagaactgatgcattggaggcagttagggagcttttcagtggtgatgggcagacaaagaaagggcgcaaagggcaaaatgaggttcctcttcctcctggggtgcaccacagattgaccacaagtcccacattgatgaacctggcccaagcccttgcttaccacaaaacgtgttacgaggacatgcctctgcaagattcgcaagcaacgcaagagcagcagacaatacagaacctttgtgatacacttcgaaccatcctgagactctag
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| Protein seq | MDAAVQEAKLLRQVNALIVAHLRDHNLTQAAAAVAAATMTPLAPPEPDGDDSVPANQLLRLVAKGLAVEREETGRGGGAFDSAAAAAGYGGLLPPLGTNAVDFSTQDVKGSSKSFPKHEARHVSDHKNVVRCAKFSPDGKYFASGSGDTSIKFFEVAKIKQMMLGDSKDGPVRPVIRTFYDHTQPINDLDFHPESPILISAAKDNTIRFFDFSKTVARKAFRVIQVWRFNSYPFKNIVVSGHPQRPTNPFKQDNSIYLFSTTSVYVKDILYGTDHPVAHLYDINTFTCYLSANSHDSNAAINQVRYSSTGSLYVTASKDGSLRIWDGISAECVRPIIGAHASAEVTSAIFTKDERYVLSCGKDSCIKLWEVGSGRLVKQYVGAVHRQFRCQAVFNQTEEFVVSTDEQNSEVVVWDALTAENVARLPSGHTGAPRWLGHSPAEPAFVTCVVHLYMLLKLYTDDTVPNLVGKFWLLLAFMKPDVYSTVVVHGDDDDDDARGGGGGGRHALAEDDEEEDPSSLPPLLQRLPKDFGGGASFDEYDDPYSSDLDDASLSATVVVKRGAPASTSASSRSPFLDLRRSSPRAAEVDPYSTFVVHGTARSGGASSPRESASGTFVRRSGGSSSPRESVSGTFIRRTGSPSSPHESISGTFIHHTSGASSPRDTAQGGGGFGSSFWSPAVGQSEELRQPALLVQQQHQQQQNSRRKPSVSSVPESVTREDPSTKYELLHELGKGSYGAVYKARDLRTQELVAIKIISLTEGEEGYEDIRGEIEMLQQCSHPNVVRYFGSYQGEEYLWIVMEYCGGGSVADLIGITEEPLDESQIAYICREALKGLAYLHSIFKVHRDIKGGNILLTEQGEVKLGDFGVAAQLTRTMSKRNTMEQGMYLWLVPQISPHKYPHRPFSHVSNHSAIALRFSAMRIYFFASRHEVREVDVWALGVSAIEMAEVIFMISSEPAPMLEDKEKWSLLFHDFIAKCLTKDPRLRPAASEMLKHKFIEKCNPGASKMLAKIKEAKKIRAKVAAETELSGPDSTMQDATVRINDDFGETVPTNPQQQTNHETYDGGAGDFGTMIVHPEDGDEVDESPIFPSSEFIPGLGSINSFTHDPKRAELISNFWAENTADIEANKEQYLDEHPDMQEAKTMPPSTGTVKKLKVAEGTMPRHGNQVSSASPCVASTMTKLNSSPSRKAFSVQDKLWSIYAAGNTVPIPFLKAIDISPLALVSDSVVGNGLAGSNRTDALEAVRELFSGDGQTKKGRKGQNEVPLPPGVHHRLTTSPTLMNLAQALAYHKTCYEDMPLQDSQATQEQQTIQNLCDTLRTILRL |
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| Function | Cleavage stimulation factor subunit 50 [UniProtKB/Swiss-Prot:Q8L4J2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_03g0034410 | OsNaBo_03g0034410.01 | Chr03 | 33613077 | 33627587 | + | NAM | ||
| CDS seq | atggacgcggcggtgcaggaggcgaagctgctgcgccaggtgaacgccctcatcgtggcgcacctccgcgaccacaacctcacgcaggctgccgccgccgtcgccgccgccaccatgacgcccctcgccccgcccgagcccgacggcgacgactccgtccccgccaaccagctcctccgcctcgtcgccaagggcctcgcggtggagcgggaggagacggggaggggaggaggggcgttcgactctgccgccgccgccgctggatacggtggattgttgccgccgctcggcaccaatgccgtggatttcagcacgcaggatgttaagggctcatccaagagcttccccaagcacgaggccaggcacgtatctgatcacaagaatgttgtccgatgtgcaaaatttagtcctgatgggaaatattttgcatccgggagtggtgacacatcaattaagttcttcgaggttgctaaaataaagcagatgatgctaggggattccaaagatggccctgtccgtcctgtgatccgtacattttacgatcacacgcagcccatcaatgatcttgattttcatcctgagagccccatactgatatctgcagcaaaagacaatacaataaggttcttcgacttctcaaaaactgttgcaaggaaagcattcagagttattcaggtgtggagatttaactcgtatcccttcaaaaacatagttgtttctggtcatccacaaagaccaacaaaccccttcaagcaagacaattctatttatctgtttagcactacatctgtttatgttaaggatatcctctatgggactgatcacccagtggctcatctatatgatattaacactttcacatgctacttatcggcaaattcacatgattccaatgctgccattaatcaggtccgatactcttctactgggagcctgtatgtgactgcttccaaggatggttctctgcgcatctgggatgggatatccgctgaatgtgtccggcccataattggagcacatgcatctgcagaggttactagtgcaattttcacaaaagatgagaggtatgtcctatcatgtgggaaggattcttgtataaaattatgggaagttggctctggacgacttgtcaagcaatatgtaggcgctgttcacagacaatttcgatgtcaggctgtcttcaaccaaacggaggaatttgtagtatcaaccgatgaacaaaacagtgaggttgtcgtctgggatgcacttaccgctgaaaatgtagcaaggttgccctctggccacaccggtgccccgaggtggcttggccactcccctgcagaaccagcctttgttacatgcgttgtacacttgtacatgctactgaagttgtacactgatgatactgtacccaacttggtaggaaaattttggctcttgttggcattcatgaagcccgacgtgtactccaccgtcgtcgtccacggggacgacgacgacgacgacgcccgcggcggcggcggcggcggccgccatgccctcgcggaggatgacgaggaggaggacccgtcgtcgctgcccccgctcctccagcgcctccccaaggacttcggcggcggagcctccttcgacgagtacgacgacccctactcgtcggacctcgacgacgcctcgctctccgccaccgtcgtcgtcaagcgcggcgcccccgcctccacctcggcctcctcccgatccccgttcctggatctgcgccgctccagcccccgtgccgccgaggtcgacccgtactccaccttcgtggtacacggcaccgcccgctccggcggcgcctccagcccgcgggaatctgcctccggcacattcgtccgccgctccggtggttcctccagcccccgcgagtccgtgtccggcacattcatccgccgcacgggcagcccctccagcccccacgagtcgatctccggcaccttcatccaccacaccagcggcgcctctagcccccgcgacactgcccagggtggcggagggtttggttcctcgttctggagccctgcggtggggcagtccgaggagctccggcaaccggcgcttcttgtgcagcagcagcaccagcaacagcagaattcgaggcggaaaccatcggtgagctctgtgccggagagtgttaccagggaggatccttccactaagtatgagctgctccatgagcttggtaaaggttcctatggtgcagtgtacaaagcaagggatctcagaacacaggagcttgtggctatcaagatcatctccttgacagaaGgggaagaaggatatgaagacatacggggagaaattgagatgctgcagcaatgcagccatccgaatgtcgtccgctacttcgggagctaccaaggagaagaatacctttggatagttatggaatactgtggtggtggaagcgttgctgatttgataggcataacagaggagcctcttgatgaatcccaaatagcttatatatgtagagaagcactaaagggtcttgcttacttgcattcaatttttaaagttcatagagatattaagggtggcaatattctgctaactgagcaaggagaggtgaagttgggcgattttggggtagctgcccagctgacgagaaccatgtcaaagcgcaacacgatggaacaggggatgtacttatggcttgtcccccaaatatcacctcataagtaccctcaccgacccttttcacacgtttccaaccattcagctattgccctgcgctttagtgctatgaggatctatttctttgcctccaggcatgaggtgagagaggtggatgtgtgggcattaggtgtatctgcaattgaaatggcagaggtgatctttatgatatctagtgaacccgcaccaatgctcgaggataaggagaagtggtcccttcttttccatgattttattgccaagtgcttaacaaaagatccaagacttcgcccagctgcaagtgagatgctgaagcacaagtttattgaaaaatgcaaccctggagcttcgaaaatgttggcaaaaatcaaggaagcaaagaagatcagagcaaaagtagctgcggagaccgagctatctggccctgacagtacaatgcaggatgcaactgttcgaattaatgatgactttggagaaactgttcctacaaaccctcagcaacaaacaaatcacgaaacatatgatggtggggcaggtgattttggtacaatgatagttcatcctgaagacggcgacgaagttgatgaatcacccatcttcccaagttcagaattcataccaggccttgggagcataaactctttcacacatgatccaaagagggccgagcttatttcaaatttttgggcggagaacacagctgatattgaagccaataaagagcaatatctagatgaacatcctgatatgcaggaagcaaaaacaatgccaccttcaactggaacggttaaaaagcttaaagttgcagaagggactatgccacgccatggtaatcaagttagctctgcctcaccatgtgttgctagcacaatgaccaaattaaacagcagccccagccgtaaagcattctcagttcaggataagctctggtcaatttatgctgcgggcaacaccgttcctataccattcctcaaggcaattgacatttcaccactagctctagtatcagatagtgtagtaggaaatggcctagctgggtcaaatagaactgatgcattggaggcagttagggagcttttcagtggtgatgggcagacaaagaaagggcgcaaagggcaaaatgaggttcctcttcctcctggggtgcaccacagattgaccacaagtcccacattgatgaacctggcccaagcccttgcttaccacaaaacgtgttacgaggacatgcctctgcaagattcgcaagcaacgcaagagcagcagacaatacagaacctttgtgatacacttcgaaccatcctgagactctag
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| Protein seq | MDAAVQEAKLLRQVNALIVAHLRDHNLTQAAAAVAAATMTPLAPPEPDGDDSVPANQLLRLVAKGLAVEREETGRGGGAFDSAAAAAGYGGLLPPLGTNAVDFSTQDVKGSSKSFPKHEARHVSDHKNVVRCAKFSPDGKYFASGSGDTSIKFFEVAKIKQMMLGDSKDGPVRPVIRTFYDHTQPINDLDFHPESPILISAAKDNTIRFFDFSKTVARKAFRVIQVWRFNSYPFKNIVVSGHPQRPTNPFKQDNSIYLFSTTSVYVKDILYGTDHPVAHLYDINTFTCYLSANSHDSNAAINQVRYSSTGSLYVTASKDGSLRIWDGISAECVRPIIGAHASAEVTSAIFTKDERYVLSCGKDSCIKLWEVGSGRLVKQYVGAVHRQFRCQAVFNQTEEFVVSTDEQNSEVVVWDALTAENVARLPSGHTGAPRWLGHSPAEPAFVTCVVHLYMLLKLYTDDTVPNLVGKFWLLLAFMKPDVYSTVVVHGDDDDDDARGGGGGGRHALAEDDEEEDPSSLPPLLQRLPKDFGGGASFDEYDDPYSSDLDDASLSATVVVKRGAPASTSASSRSPFLDLRRSSPRAAEVDPYSTFVVHGTARSGGASSPRESASGTFVRRSGGSSSPRESVSGTFIRRTGSPSSPHESISGTFIHHTSGASSPRDTAQGGGGFGSSFWSPAVGQSEELRQPALLVQQQHQQQQNSRRKPSVSSVPESVTREDPSTKYELLHELGKGSYGAVYKARDLRTQELVAIKIISLTEGEEGYEDIRGEIEMLQQCSHPNVVRYFGSYQGEEYLWIVMEYCGGGSVADLIGITEEPLDESQIAYICREALKGLAYLHSIFKVHRDIKGGNILLTEQGEVKLGDFGVAAQLTRTMSKRNTMEQGMYLWLVPQISPHKYPHRPFSHVSNHSAIALRFSAMRIYFFASRHEVREVDVWALGVSAIEMAEVIFMISSEPAPMLEDKEKWSLLFHDFIAKCLTKDPRLRPAASEMLKHKFIEKCNPGASKMLAKIKEAKKIRAKVAAETELSGPDSTMQDATVRINDDFGETVPTNPQQQTNHETYDGGAGDFGTMIVHPEDGDEVDESPIFPSSEFIPGLGSINSFTHDPKRAELISNFWAENTADIEANKEQYLDEHPDMQEAKTMPPSTGTVKKLKVAEGTMPRHGNQVSSASPCVASTMTKLNSSPSRKAFSVQDKLWSIYAAGNTVPIPFLKAIDISPLALVSDSVVGNGLAGSNRTDALEAVRELFSGDGQTKKGRKGQNEVPLPPGVHHRLTTSPTLMNLAQALAYHKTCYEDMPLQDSQATQEQQTIQNLCDTLRTILRL
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_03g0034410 | OsNaBo_03g0034410.02 | Chr03 | 33618642 | 33627610 | + | IsoSeq | ||
| CDS seq | Ttttttttttctctctctccccccttccaacgagcacgttccccgtcctcctccgccccacctcgcgtggcacgcccatggccttctccccgcgctcgccgtggtcgcgctccaggaagcccgacgtgtactccaccgtcgtcgtccacggggacgacgacgacgacgacgcccgcggcggcggcggcggcggccgccatgccctcgcggaggatgacgaggaggaggacccgtcgtcgctgcccccgctcctccagcgcctccccaaggacttcggcggcggagcctccttcgacgagtacgacgacccctactcgtcggacctcgacgacgcctcgctctccgccaccgtcgtcgtcaagcgcggcgcccccgcctccacctcggcctcctcccgatccccgttcctggatctgcgccgctccagcccccgtgccgccgaggtcgacccgtactccaccttcgtggtacacggcaccgcccgctccggcggcgcctccagcccgcgggaatctgcctccggcacattcgtccgccgctccggtggttcctccagcccccgcgagtccgtgtccggcacattcatccgccgcacgggcagcccctccagcccccacgagtcgatctccggcaccttcatccaccacaccagcggcgcctctagcccccgcgacactgcccagggtggcggagggtttggttcctcgttctggagccctgcggtggggcagtccgaggagctccggcaaccggcgcttcttgtgcagcagcagcaccagcaacagcagaattcgaggcggaaaccat
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| Protein seq | FFFSLSPPFQRARSPSSSAPPRVARPWPSPRARRGRAPGSPTCTPPSSSTGTTTTTTPAAAAAAAAMPSRRMTRRRTRRRCPRSSSASPRTSAAEPPSTSTTTPTRRTSTTPRSPPPSSSSAAPPPPPRPPPDPRSWICAAPAPVPPRSTRTPPSWYTAPPAPAAPPARGNLPPAHSSAAPVVPPAPASPCPAHSSAARAAPPAPTSRSPAPSSTTPAAPLAPATLPRVAEGLVPRSGALRWGSPRSSGNRRFLCSSSTSNSRIRGGNH
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A3 | Chr03 | 33625372 | 33625455 | + | OsNaBo_03g0034410.01 | OsNaBo_03g0034410.02,OsNaBo_03g0034410.01 | All |
| SE | Chr03 | 33623555 | 33624094 | + | OsNaBo_03g0034410.02 | OsNaBo_03g0034410.02,OsNaBo_03g0034410.01 | All |
| MX | Chr03 | 33621307 | 33623511 | + | OsNaBo_03g0034410.01 | OsNaBo_03g0034410.02,OsNaBo_03g0034410.01 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.331153 | 7.032556 | 2.975825 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0755000 | RBH | 0.695522 | 0.757721 | 3.042789 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g54780 | RBH | 0.470132 | 0.508614 | 0.781711 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0755000 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0035210 | RBH | 0.088541 | 3.528504 | 4.193063 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0034880 | RBH | 0.068036 | 0.422211 | 1.909000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0034970 | RBH | 0.538498 | 2.583001 | 4.768965 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0035270 | RBH | 0.015435 | 0.277094 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0034800 | RBH | 4.267374 | 19.899897 | 16.469831 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0533000 | RBH | 4.8211955 | 12.0104225 | 12.4879185 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0034580 | RBH | 0.299165 | 0.478263 | 1.371033 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0532300 | RBH | 4.5448095 | 8.121064 | 17.370798 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0035050 | RBH | 0.229494 | 0.054100 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0035080 | RBH | 0.234146 | 5.345797 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0034740 | RBH | 4.159909 | 0.882385 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0034820 | RBH | 0.000000 | 0.000000 | 0.045373 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0034780 | RBH | 0.117918 | 4.672246 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G034570 | RBH | 0.312735 | 2.187771 | 1.706745 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0034490 | RBH | 2.416737 | 45.775059 | 8.025199 |
