Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_03g0024440 | OGI:03061460 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr03:23620263-23621117 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | atgcacgcgccggtgggcgacgacgacgacgacgtgcaggtccggcgtgagatggaggcgcagttcgacgccgaggtgtccctcctgtcgcggctgcgccaccccaacgtcgtgcggctcgtcggcgtgtgccgggagccggaggtgtactggatcatcaccgagctcatgcgacgcggcacgctcagcgcgtacctgcacgggcgggagccctactcgctgccgccggagaccatcgtccgcctcgcgcttgacgtcgcccgtggcatggagtacctccacgcgcgtggcgtcgtccaccgcgacctcaagccggagaacctgctgctcgacgtcggcgggcgcgtcaaggtcgccgacctgggcacgtcctgcctcgaggccacctgccgcggcgacaagtgctcctccaaggcgggcacgttccggtggatggcgccggagatgatccacgacaagcgctgcaaccgcaaggtggacgtgtacagcttcggcctcgtgctgtgggagctcaccacctgcctcgtgccgttccagaacttgagccccgtgcaggtcgcctactccgtctgcgacagggacgccaggccgccgctctcgccgtcgtgcccgccggccatcaacagcctcatcaagaggtgctggtccaccgaaccagcgaggcgtcccgagttcaaacagatcgtgtccgtgctggagagctacgaccgctgcctccggcaaggcctgccaatggtggcgctgccggagccgtcgtcatcgccgctggcctcgttgctcggcgccttcaagatccgatcctgcacgagcacaacgcgttcctccataaccgatcatagaagagttcatccttag
More
|
||||||||||
| CDS seq | atgcacgcgccggtgggcgacgacgacgacgacgtgcaggtccggcgtgagatggaggcgcagttcgacgccgaggtgtccctcctgtcgcggctgcgccaccccaacgtcgtgcggctcgtcggcgtgtgccgggagccggaggtgtactggatcatcaccgagctcatgcgacgcggcacgctcagcgcgtacctgcacgggcgggagccctactcgctgccgccggagaccatcgtccgcctcgcgcttgacgtcgcccgtggcatggagtacctccacgcgcgtggcgtcgtccaccgcgacctcaagccggagaacctgctgctcgacgtcggcgggcgcgtcaaggtcgccgacctgggcacgtcctgcctcgaggccacctgccgcggcgacaagtgctcctccaaggcgggcacgttccggtggatggcgccggagatgatccacgacaagcgctgcaaccgcaaggtggacgtgtacagcttcggcctcgtgctgtgggagctcaccacctgcctcgtgccgttccagaacttgagccccgtgcaggtcgcctactccgtctgcgacagggacgccaggccgccgctctcgccgtcgtgcccgccggccatcaacagcctcatcaagaggtgctggtccaccgaaccagcgaggcgtcccgagttcaaacagatcgtgtccgtgctggagagctacgaccgctgcctccggcaaggcctgccaatggtggcgctgccggagccgtcgtcatcgccgctggcctcgttgctcggcgccttcaagatccgatcctgcacgagcacaacgcgttcctccataaccgatcatagaagagttcatccttag
More
|
||||||||||
| Protein seq | MHAPVGDDDDDVQVRREMEAQFDAEVSLLSRLRHPNVVRLVGVCREPEVYWIITELMRRGTLSAYLHGREPYSLPPETIVRLALDVARGMEYLHARGVVHRDLKPENLLLDVGGRVKVADLGTSCLEATCRGDKCSSKAGTFRWMAPEMIHDKRCNRKVDVYSFGLVLWELTTCLVPFQNLSPVQVAYSVCDRDARPPLSPSCPPAINSLIKRCWSTEPARRPEFKQIVSVLESYDRCLRQGLPMVALPEPSSSPLASLLGAFKIRSCTSTTRSSITDHRRVHP |
||||||||||
| Function | Serine/threonine/tyrosine-protein kinase HT1 [UniProtKB/Swiss-Prot:Q2MHE4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_03g0024440 | OsNaBo_03g0024440.01 | Chr03 | 23620263 | 23621117 | + | NAM | ||
| CDS seq | atgcacgcgccggtgggcgacgacgacgacgacgtgcaggtccggcgtgagatggaggcgcagttcgacgccgaggtgtccctcctgtcgcggctgcgccaccccaacgtcgtgcggctcgtcggcgtgtgccgggagccggaggtgtactggatcatcaccgagctcatgcgacgcggcacgctcagcgcgtacctgcacgggcgggagccctactcgctgccgccggagaccatcgtccgcctcgcgcttgacgtcgcccgtggcatggagtacctccacgcgcgtggcgtcgtccaccgcgacctcaagccggagaacctgctgctcgacgtcggcgggcgcgtcaaggtcgccgacctgggcacgtcctgcctcgaggccacctgccgcggcgacaagtgctcctccaaggcgggcacgttccggtggatggcgccggagatgatccacgacaagcgctgcaaccgcaaggtggacgtgtacagcttcggcctcgtgctgtgggagctcaccacctgcctcgtgccgttccagaacttgagccccgtgcaggtcgcctactccgtctgcgacagggacgccaggccgccgctctcgccgtcgtgcccgccggccatcaacagcctcatcaagaggtgctggtccaccgaaccagcgaggcgtcccgagttcaaacagatcgtgtccgtgctggagagctacgaccgctgcctccggcaaggcctgccaatggtggcgctgccggagccgtcgtcatcgccgctggcctcgttgctcggcgccttcaagatccgatcctgcacgagcacaacgcgttcctccataaccgatcatagaagagttcatccttag
More
|
|||||||
| Protein seq | MHAPVGDDDDDVQVRREMEAQFDAEVSLLSRLRHPNVVRLVGVCREPEVYWIITELMRRGTLSAYLHGREPYSLPPETIVRLALDVARGMEYLHARGVVHRDLKPENLLLDVGGRVKVADLGTSCLEATCRGDKCSSKAGTFRWMAPEMIHDKRCNRKVDVYSFGLVLWELTTCLVPFQNLSPVQVAYSVCDRDARPPLSPSCPPAINSLIKRCWSTEPARRPEFKQIVSVLESYDRCLRQGLPMVALPEPSSSPLASLLGAFKIRSCTSTTRSSITDHRRVHP
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0588400 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g39150 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0588400 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0024940 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0024730 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0024790 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0024840 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0024550 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0376200 | SBH | 0 | 0 | 0.029779 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0024330 | SBH | 0.0 | 0.072425 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0377800 | SBH | 0 | 0 | 0.129213 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0024620 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0024650 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0024730 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0024500 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0024390 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G024470 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
