Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_03g0006450 | OGI:03012640 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr03:4686057-4693870 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | gatacggatgctgtcagcctggacaaccgtttgaactcgagacaccgtagtcaaaacatagcaaggattatacatttttccttacacaaactatctgcagattctagacctagcttctccaactatctgaagcttttcacgagctacatcattttgatacattttacagaagaattactgtacaaaacgcatacaaaaattactgtaccaaccaaacttcaaaacatacaaaaatttagcaatgcaactacaggttatcgatttggtaatgctatgtacaaagacctggaagtaatttacaagcgcatacacaagacgttagatcctagaaatatccaggcgttggcatgtcgtcatcccacagttctttgaattcgctcatcaaaaggccttcatccatctctgtcgactcctcgagcatcttttcttgcatagcctattagcagtaaagaattcagcaatcattccatgaattgcttgtctaattttagttcagttgtcactctaatattccaaaactgaaagcatgatagtacctgggattcctgcattttagttaccaccgtcaaaatcctctggtactgatccctggcatctgggtattgaaccatggatttcactctggcaagagctttctgtagcctttcttcagtctgcttccgtccttcttgtaagaaatcatagtcattctcggcaggtctgttttgggtcacgttgccactgctgctgctagtactctctgtgactgcattttctgtgggtcgaaacccacgcaacccagcacctcgtcgcctccagcgcaatataaccttctccactatcccaacagaccaaattattttgcgataatgctttctcacttggtgacctcgcacatgcgcctagcaagcagaaaataacgacgacaaagaaatcatcaattatacttatagtgctataatacagtcacaaagcatgtaagtgtttgttaaacataattatgtgattcatatcctctactgtgaaaagacgcttctcaataaggaaaaaactcacattccatttaataactaagtataatttcttatggttcatcaaagctaaaatagaattcggtagcagaagatctttaaaacactggcaatcttgtctaaaacattaatctggagctttcagaatacataaaacatttaggtgaattatcatcatacaataacatccatacctggatcttgacgattcgctgtctaataagcagaaattcttttcttcccttccatccacggaacttgttttgtattcgagtcgcagcagcatgcagaggatcaagctgtgcaggtttggatggtttagcagacaagagtgacatggcacgctcatctgatatcgcaccattttcatcctcatactgaactgcttgttttctctggaaggattgcatcctaaaaacttggtatatccgggcagcagcttgggcggcattacgaacagcacctagtgaatctcccatagatccagtctgatggccttcaactgccaaaggcgaggcgcttctatcagcaacatttacaatgccaggtagaccagatatttctcctgcactgctacgcatggcttcctttagattgagagtctgcagatgacttgttaaagaagactctgctaggaaaccagagattcccttgtgtccgttggctgatgcaagatcagctggtgtgcttcctgaagggaaacttggtgttgggtctgttacagctccaggagctgcacctagtgctataagtgcaacgactgtccgctctctgcacaacaggtcaaacaagtttaatacatataaagctAATAaataaataaataaataaataaataaactctgagcaattaccttccacaaaatgcagcccagtggagtgcagtccatccatgagcatctctgaagtttatattcacaccagcagctattgttggtcttattgcccaatcgtaccctagggcagctgccaaatgaagcacaccctgcccctcctcatctaacatactgggacctttgcctccatcccctactttatggagaagccagatatgcaatttttccttaatgcggttttgaaggaactgatcttgcttatcatctgtggcaggctcattatcatcagccaactttagcaactcagaccaatcatcattgttcatcatcaatgaacttatcttcttgctcaaatcaataatctccttcgtggggttagacagagttgtctggatctcatcttgctccacagacaatagtttatcaagacgcttctggagatatattttgtttgtagaaccaagtggacttggagcatccatgtactgaggtcggaaatcaaactcccgtacttcactgcaggccaatctattggagcaagtcacatagaaagggaccctgccaggcttgtgtgagggagaatgacatacaagagtatcatctgctataatctcagctgggacttcaaattctccaaacatgcatgaccattttaatctcttaacttcatcagaacttaagaaattacctttaataaatacctacagtatacgagaaattcgtaagcaacagtaaattcactctgagctacaaggacaatcctatgacactaccaagacctccaatctcaaaggcatcttgcgtcAaaaaaaataaatctcaaaaggcaccaatggtgggttttcagaagacataccctagtctttgaacctgcatatgtccaggttggagaaaaatcaactatagtaaacagctgatcttgtgcaagcactggtcccagagtatactgatcactgcttgatgcttcaatgatattgtcagcttcttcactgttccagtacactccagaactagatgtgatttgagaatcatctacttcagcaagctctttgctcatccatctagtgaaactgtcatttttcttaaaactgtcctttatgatatcagaaagactagatgattgagttttcaagagagggtaattaatggcttcctccaaagttttatcattttgttgaaagctgtccactgtagcaaatgtaccacttgcatttggaatctgaaattcagtagcttctcagttatgtaccaaaaccaaaaggaatcctgacaaaatattatatatatatatatatatatatatatatatatatatatatatatatatatatagtacaatactagtaagatgaaactcatgaagctgcaattaagtgcagtatgcaaaacaatcaacaatataaacttgcgaagatctcaagtgctagcaagacaacaaagagaagtagttttatccatcaaaaaacaaaaccaggtgctcgcttataaagatatatacacatatatatgccaattggaagaccctaaaatccgtagctatgtccagtataaaccagacaataccataagtccattccagactttaaacctgaacaaatcatggacctgggctacatctctacagtttgttagctgtgcaatatctctttaacatcataattttgcaccttttccctatactttcatctaattttaccttgtgaatacgtcatttttgtcttaaaacattcaaggttcaatatgggaattttgaggaacaacagtagttaatcgcaatagtaaaaacaatatgtaagactcttgacattattaaacttcaatagtattcatcgagtacataattatgggttattcgattgtgttcagttgttcacttgtcaagtactacctccgttttttaatagatgacgccgttgactttttctcacatgtttgcaaaaaatttttgaataagacgaatggtcaaacatgtgagaaaaagtcaacggcgtcatctattagaaaacggagggagtacttgtccaaatccatccaggcaatggtaaactccatttcacaaacaaaggttctcAaaacacaacttggcgtaaccaaataaacatattttaacacactccagccaggcatatttttaataagaaaataattataaaacttcgagcaattctttgtttttttctcaatggatatggagtttcctaccaaaatgacaacatatttaaaaggtttgactctttttttctcttactgaagggcagctgctactgttgtcaatacttgtattcaaataacatctaccaatatggctatgcctttttaccacgagagagcttttgtatttgcaatacataaatgcatgcacaatacctgccatggagtttctccatctgtatcatcaccatctacatccttgatactcagtccattgttgtatacttcatcaaatgtgaaagattcaattcctgggcctcctgtaaaaggagactgttcggagggaacaggagcttggtaaagaggaatttgatgggtccctttgtcaggtttcattgcttcaatccataatgatagatcaaactgactattagggccattaaatgcagtcccaaggtctgactcgttaagaaccacgggtaagttatcttgaccatgagaatagaagcctgtattaggtgctgtagcctgtaatccttgataactgcctgaacattttttAaaaaatataaatttataaaatcttacatgtatattcaacttaggttcataatgagaagattatacttaatgccacttgcctacagatgacgcaggaacataagagctgaatatagaatcatcaatcacagatccacctccattttcatgctgccgcatccgagagaaagagttgtatctggctcctcccgaataaatatctgctgcaccgaattttgctttagatatgctgtgtatagttggaatatgtatcagtgaaactattttaatggactttatgcagaacagaaggaggtggctaaacagctctacctgattctgtttcatcatattcagaggcctgtccgctaactgagctttctccttcggtagtttgtgaaggcaattgacttaaagggctatccgcatgagatacttgcagtacatcatcatgtcccgtactacgagagcttaattttccagcctgatggtcatacccatatatgtgcaggaaatgaaacttcagcttatagatgaaagAaaataaacgtgaagacaacaaagaaattaggtaaccaaggtagaaaaaagcaagcaagagcgttaaatctaccactaaatccaacacaaacagagggtttccataataggtcctcaaatgtaaattaaacaatgttaaatgttaatatagaatatttaatatgtttatcataagatatattatacatatggtgccctcctgagactagttaaaaaatatacaactggacaatgttctttaaaaattgatggtaccatatctaacattattagttaattttactaaaagacttgctgctgttttaaaaaatattgtctgttttcaatattcaccacactattaataatatcagaagggaacatcaaggactaacttaacatatcatggtgctaaagcagttctgtaactgccatatatgttgtttagctactggtttaacataaaaatatcaccaaacacgtgggtccagtgaaatgtggatcacaaacaattttgtatagcatcaaaagccagctatcaatcaacatgatgaggtagttttacgagaaaatcgataatactattaaacaatttactttatatgaagctttccactcctataagagatgtatataagatttaaattcaaatataagatgaacagataactaaataaactgcaatcatagcaggattaggtgcaaccttgacttccagataatgtacaagtacaatgtgcatgtaatccctgaaaaacaaaaaaaatgattatatatcaactaattgttttttgtgtcatcgtgcatgcatataagctgcattatgaacacatgctattagttacttgttattgtgcctttgagcagcagatgcacagagtagtacaaaagcaaaataattgatcaacaatagttcacttactcctccaacatccaataactcctcctttggaaatttatattctcctccccatgagcatagtagcaatgaagcacatcaatgcttccagactaaatttataaataaaaaagtcattatcttaatatacaaagagtactggactgccagtatagaaaccctttaaaacaaatgctgtaaggtactatcgcagaagaaatttgtaatactaatttttttacttacctttaacctttcatgggcttctttgactgtctttccatctcttttcttcctccaattatgaccgtccttcctgaaatatctcaggaccttccgatcaaacaagaaaagtgaaccacctaaagccatggatacaaaatattagtaagatacaaaaaaacaaaaacaaagccttaaactgattacttatagacactttatcaaatcctttgtgtacgtaattgaggcaatcacaggtgttgagagtgaagacagtagtaaatcaaatgtgcaaaccacaaaatcataactgatcaaaaggggattgattaaaggaaaagagcatagtgtaattgaaagattaaaggatggtaagttgataacacaaggggccaggaaatacaattaaaaaatgagaaggtgtataggcttttgatcaagtggcaaatgttttatgtttgggcagggtagcatgataactgaaaatcacacacccacgttttatgttcttaaacagcatagtacaagttaacgaatgaacccgccaaaaacaacatagttaggtcaggggtatatgtcaactgcttaaaaataataaacatgcgacttttgtgacaaaaaattataagacaacagtactcgtggagatcatacttggaggcctatttggaggttcaggagcaatacggaaactcctgtaattcttaagtatttcacaaatttcagtcggacgtaaccatcggcgttgagcctccttcagtatctgctcaatatctgtttagaagtcgatgaaatgcagagttagacaaccgaatatatttgtaaatgagaaagaattacgcccttttttttcaaattactacgcatctaagccaacttttaggtccaagcccatctccagaacacaaatacaattcccaatcctttagagcagttgcaacagttcccgatcactccagagtccagaacgctcagtcttagagaccggaccggaatctctgctttgcatcatcacctcaactcctgtggccaccaaaaactccgtacaattccgacagaggaacacgaaaaattccgacgaactccccaagtttccaaccacccacgcaatcagtagactccaaacccaaattccaaatcccgcgccgaacgaacagggccaacaaaactcccagctccaccggcttccgcgccacaaactccaccacccggaacgcaaccggagtactaggaaactaaccaaaacaaagactgaggcgttgaccaaagccagccgcttcgtaaatccaccaatcaaaccacagaacgcacgcagatgagcacaaaccGggggaagaaaaaggaaaatctcagagcccacagagaccggccctcacctagctgcggcgcgatcgcgtagcgccgcccctccgccatcgcgaacaacccgcccgcccgcgcgcgcgccggccagcagattcaccgctcctcctcctcctcccggatcgcgagcgggctcccaccacctccctttccccggcgatccggggcgagatttcgcGgggggttttgtgcGggggttcgacgcgagagacggtaggtggcggtgttgcttgggggggcgaggcgagagggagaacaattggacaccgcacgcat
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| CDS seq | atggcggaggggcggcgctacgcgatcgcgccgcagctagatattgagcagatactgaaggaggctcaacgccgatggttacgtccgactgaaatttgtgaaatacttaagaattacaggagtttccgtattgctcctgaacctccaaataggcctccaagtggttcacttttcttgtttgatcggaaggtcctgagatatttcaggaaggacggtcataattggaggaagaaaagagatggaaagacagtcaaagaagcccatgaaaggttaaagtctggaagcattgatgtgcttcattgctactatgctcatggggaggagaatataaatttccaaaggaggagttattggatgttggaggaggattacatgcacattgtacttgtacattatctggaagtcaaggctggaaaattaagctctcgtagtacgggacatgatgatgtactgcaagtatctcatgcggatagccctttaagtcaattgccttcacaaactaccgaaggagaaagctcagttagcggacaggcctctgaatatgatgaaacagaatcagatatttattcgggaggagccagatacaactctttctctcggatgcggcagcatgaaaatggaggtggatctgtgattgatgattctatattcagctcttatgttcctgcgtcatctgtaggcagttatcaaggattacaggctacagcacctaatacaggcttctattctcatggtcaagataacttacccgtggttcttaacgagtcagaccttgggactgcatttaatggccctaatagtcagtttgatctatcattatggattgaagcaatgaaacctgacaaagggacccatcaaattcctctttaccaagctcctgttccctccgaacagtctccttttacaggaggcccaggaattgaatctttcacatttgatgaagtatacaacaatggactgagtatcaaggatgtagatggtgatgatacagatggagaaactccatggcagattccaaatgcaagtggtacatttgctacagtggacagctttcaacaaaatgataaaactttggaggaagccattaattaccctctcttgaaaactcaatcatctagtctttctgatatcataaaggacagttttaagaaaaatgacagtttcactagatggatgagcaaagagcttgctgaagtagatgattctcaaatcacatctagttctggagtgtactggaacagtgaagaagctgacaatatcattgaagcatcaagcagtgatcagtatactctgggaccagtgcttgcacaagatcagctgtttactatagttgatttttctccaacctggacatatgcaggttcaaagactagggtatttattaaaggtaatttcttaagttctgatgaagttaagagattaaaatggtcatgcatgtttggagaatttgaagtcccagctgagattatagcagatgatactcttgtatgtcattctccctcacacaagcctggcagggtccctttctatgtgacttgctccaatagattggcctgcagtgaagtacgggagtttgatttccgacctcagtacatggatgctccaagtccacttggttctacaaacaaaatatatctccagaagcgtcttgataaactattgtctgtggagcaagatgagatccagacaactctgtctaaccccacgaaggagattattgatttgagcaagaagataagttcattgatgatgaacaatgatgattggtctgagttgctaaagttggctgatgataatgagcctgccacagatgataagcaagatcagttccttcaaaaccgcattaaggaaaaattgcatatctggcttctccataaagtaggggatggaggcaaaggtcccagtatgttagatgaggaggggcagggtgtgcttcatttggcagctgccctagggtacgattgggcaataagaccaacaatagctgctggtgtgaatataaacttcagagatgctcatggatggactgcactccactgggctgcattttgtggaagagagcggacagtcgttgcacttatagcactaggtgcagctcctggagctgtaacagacccaacaccaagtttcccttcaggaagcacaccagctgatcttgcatcagccaacggacacaagggaatctctggtttcctagcagagtcttctttaacaagtcatctgcagactctcaatctaaaggaagccatgcgtagcagtgcaggagaaatatctggtctacctggcattgtaaatgttgctgatagaagcgcctcgcctttggcagttgaaggccatcagactggatctatgggagattcactaggtgctgttcgtaatgccgcccaagctgctgcccggatataccaagtttttaggatgcaatccttccagagaaaacaagcagttcagtatgaggatgaaaatggtgcgatatcagatgagcgtgccatgtcactcttgtctgctaaaccatccaaacctgcacagcttgatcctctgcatgctgctgcgactcgaatacaaaacaagttccgtggatggaagggaagaaaagaatttctgcttattagacagcgaatcgtcaagatccaggcgcatgtgcgaggtcaccaagtgagaaagcattatcgcaaaataatttggtctgttgggatagtggagaaggttatattgcgctggaggcgacgaggtgctgggttgcgtgggtttcgacccacagaaaatgcagtcacagagagtactagcagcagcagtggcaacgtgacccaaaacagacctgccgagaatgactatgatttcttacaagaaggacggaagcagactgaagaaaggctacagaaagctcttgccagagtgaaatccatggttcaatacccagatgccagggatcagtaccagaggattttgacggtggtaactaaaatgcaggaatcccaggctatgcaagaaaagatgctcgaggagtcgacagagatggatgaaggccttttgatgagcgaattcaaagaactgtgggatgacgacatgccaacgcctggatatttctag
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| Protein seq | MAEGRRYAIAPQLDIEQILKEAQRRWLRPTEICEILKNYRSFRIAPEPPNRPPSGSLFLFDRKVLRYFRKDGHNWRKKRDGKTVKEAHERLKSGSIDVLHCYYAHGEENINFQRRSYWMLEEDYMHIVLVHYLEVKAGKLSSRSTGHDDVLQVSHADSPLSQLPSQTTEGESSVSGQASEYDETESDIYSGGARYNSFSRMRQHENGGGSVIDDSIFSSYVPASSVGSYQGLQATAPNTGFYSHGQDNLPVVLNESDLGTAFNGPNSQFDLSLWIEAMKPDKGTHQIPLYQAPVPSEQSPFTGGPGIESFTFDEVYNNGLSIKDVDGDDTDGETPWQIPNASGTFATVDSFQQNDKTLEEAINYPLLKTQSSSLSDIIKDSFKKNDSFTRWMSKELAEVDDSQITSSSGVYWNSEEADNIIEASSSDQYTLGPVLAQDQLFTIVDFSPTWTYAGSKTRVFIKGNFLSSDEVKRLKWSCMFGEFEVPAEIIADDTLVCHSPSHKPGRVPFYVTCSNRLACSEVREFDFRPQYMDAPSPLGSTNKIYLQKRLDKLLSVEQDEIQTTLSNPTKEIIDLSKKISSLMMNNDDWSELLKLADDNEPATDDKQDQFLQNRIKEKLHIWLLHKVGDGGKGPSMLDEEGQGVLHLAAALGYDWAIRPTIAAGVNINFRDAHGWTALHWAAFCGRERTVVALIALGAAPGAVTDPTPSFPSGSTPADLASANGHKGISGFLAESSLTSHLQTLNLKEAMRSSAGEISGLPGIVNVADRSASPLAVEGHQTGSMGDSLGAVRNAAQAAARIYQVFRMQSFQRKQAVQYEDENGAISDERAMSLLSAKPSKPAQLDPLHAAATRIQNKFRGWKGRKEFLLIRQRIVKIQAHVRGHQVRKHYRKIIWSVGIVEKVILRWRRRGAGLRGFRPTENAVTESTSSSSGNVTQNRPAENDYDFLQEGRKQTEERLQKALARVKSMVQYPDARDQYQRILTVVTKMQESQAMQEKMLEESTEMDEGLLMSEFKELWDDDMPTPGYF |
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| Function | Calmodulin-binding transcription activator 2 [UniProtKB/Swiss-Prot:Q6NPP4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_03g0006450 | OsNaBo_03g0006450.02 | Chr03 | 4686089 | 4693861 | - | NAM | ||
| CDS seq | atggcggaggggcggcgctacgcgatcgcgccgcagctagatattgagcagatactgaaggaggctcaacgccgatggttacgtccgactgaaatttgtgaaatacttaagaattacaggagtttccgtattgctcctgaacctccaaataggcctccaagtggttcacttttcttgtttgatcggaaggtcctgagatatttcaggaaggacggtcataattggaggaagaaaagagatggaaagacagtcaaagaagcccatgaaaggttaaagtctggaagcattgatgtgcttcattgctactatgctcatggggaggagaatataaatttccaaaggaggagttattggatgttggaggaggattacatgcacattgtacttgtacattatctggaagtcaaggagtggaaagcttcatataaagctggaaaattaagctctcgtagtacgggacatgatgatgtactgcaagtatctcatgcggatagccctttaagtcaattgccttcacaaactaccgaaggagaaagctcagttagcggacaggcctctgaatatgatgaaacagaatcagcatatctaaagcaaaattcggtgcagcagatatttattcgggaggagccagatacaactctttctctcggatgcggcagcatgaaaatggaggtggatctttatcaaggattacaggctacagcacctaatacaggcttctattctcatggtcaagataacttacccgtggttcttaacgagtcagaccttgggactgcatttaatggccctaatagtcagtttgatctatcattatggattgaagcaatgaaacctgacaaagggacccatcaaattcctctttaccaagctcctgttccctccgaacagtctccttttacaggaggcccaggaattgaatctttcacatttgatgaagtatacaacaatggactgagtatcaaggatgtagatggtgatgatacagatggagaaactccatggcagattccaaatgcaagtggtacatttgctacagtggacagctttcaacaaaatgataaaactttggaggaagccattaattaccctctcttgaaaactcaatcatctagtctttctgatatcataaaggacagttttaagaaaaatgacagtttcactagatggatgagcaaagagcttgctgaagtagatgattctcaaatcacatctagttctggagtgtactggaacagtgaagaagctgacaatatcattgaagcatcaagcagtgatcagtatactctgggaccagtgcttgcacaagatcagctgtttactatagttgatttttctccaacctggacatatgcaggttcaaagactagggtatttattaaaggtaatttcttaagttctgatgaagttaagagattaaaatggtcatgcatgtttggagaatttgaagtcccagctgagattatagcagatgatactcttgtatgtcattctccctcacacaagcctggcagggtccctttctatgtgacttgctccaatagattggcctgcagtgaagtacgggagtttgatttccgacctcagtacatggatgctccaagtccacttggttctacaaacaaaatatatctccagaagcgtcttgataaactattgtctgtggagcaagatgagatccagacaactctgtctaaccccacgaaggagattattgatttgagcaagaagataagttcattgatgatgaacaatgatgattggtctgagttgctaaagttggctgatgataatgagcctgccacagatgataagcaagatcagttccttcaaaaccgcattaaggaaaaattgcatatctggcttctccataaagtaggggatggaggcaaaggtcccagtatgttagatgaggaggggcagggtgtgcttcatttggcagctgccctagggtacgattgggcaataagaccaacaatagctgctggtgtgaatataaacttcagagatgctcatggatggactgcactccactgggctgcattttgtggaagagagcggacagtcgttgcacttatagcactaggtgcagctcctggagctgtaacagacccaacaccaagtttcccttcaggaagcacaccagctgatcttgcatcagccaacggacacaagggaatctctggtttcctagcagagtcttctttaacaagtcatctgcagactctcaatctaaaggaagccatgcgtagcagtgcaggagaaatatctggtctacctggcattgtaaatgttgctgatagaagcgcctcgcctttggcagttgaaggccatcagactggatctatgggagattcactaggtgctgttcgtaatgccgcccaagctgctgcccggatataccaagtttttaggatgcaatccttccagagaaaacaagcagttcagtatgaggatgaaaatggtgcgatatcagatgagcgtgccatgtcactcttgtctgctaaaccatccaaacctgcacagcttgatcctctgcatgctgctgcgactcgaatacaaaacaagttccgtggatggaagggaagaaaagaatttctgcttattagacagcgaatcgtcaagatccaggcgcatgtgcgaggtcaccaagtgagaaagcattatcgcaaaataatttggtctgttgggatagtggagaaggttatattgcgctggaggcgacgaggtgctgggttgcgtgggtttcgacccacagaaaatgcagtcacagagagtactagcagcagcagtggcaacgtgacccaaaacagacctgccgagaatgactatgatttcttacaagaaggacggaagcagactgaagaaaggctacagaaagctcttgccagagtgaaatccatggttcaatacccagatgccagggatcagtaccagaggattttgacggtggtaactaaaatgcaggaatcccaggctatgcaagaaaagatgctcgaggagtcgacagagatggatgaaggccttttgatgagcgaattcaaagaactgtgggatgacgacatgccaacgcctggatatttctag
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| Protein seq | MAEGRRYAIAPQLDIEQILKEAQRRWLRPTEICEILKNYRSFRIAPEPPNRPPSGSLFLFDRKVLRYFRKDGHNWRKKRDGKTVKEAHERLKSGSIDVLHCYYAHGEENINFQRRSYWMLEEDYMHIVLVHYLEVKEWKASYKAGKLSSRSTGHDDVLQVSHADSPLSQLPSQTTEGESSVSGQASEYDETESAYLKQNSVQQIFIREEPDTTLSLGCGSMKMEVDLYQGLQATAPNTGFYSHGQDNLPVVLNESDLGTAFNGPNSQFDLSLWIEAMKPDKGTHQIPLYQAPVPSEQSPFTGGPGIESFTFDEVYNNGLSIKDVDGDDTDGETPWQIPNASGTFATVDSFQQNDKTLEEAINYPLLKTQSSSLSDIIKDSFKKNDSFTRWMSKELAEVDDSQITSSSGVYWNSEEADNIIEASSSDQYTLGPVLAQDQLFTIVDFSPTWTYAGSKTRVFIKGNFLSSDEVKRLKWSCMFGEFEVPAEIIADDTLVCHSPSHKPGRVPFYVTCSNRLACSEVREFDFRPQYMDAPSPLGSTNKIYLQKRLDKLLSVEQDEIQTTLSNPTKEIIDLSKKISSLMMNNDDWSELLKLADDNEPATDDKQDQFLQNRIKEKLHIWLLHKVGDGGKGPSMLDEEGQGVLHLAAALGYDWAIRPTIAAGVNINFRDAHGWTALHWAAFCGRERTVVALIALGAAPGAVTDPTPSFPSGSTPADLASANGHKGISGFLAESSLTSHLQTLNLKEAMRSSAGEISGLPGIVNVADRSASPLAVEGHQTGSMGDSLGAVRNAAQAAARIYQVFRMQSFQRKQAVQYEDENGAISDERAMSLLSAKPSKPAQLDPLHAAATRIQNKFRGWKGRKEFLLIRQRIVKIQAHVRGHQVRKHYRKIIWSVGIVEKVILRWRRRGAGLRGFRPTENAVTESTSSSSGNVTQNRPAENDYDFLQEGRKQTEERLQKALARVKSMVQYPDARDQYQRILTVVTKMQESQAMQEKMLEESTEMDEGLLMSEFKELWDDDMPTPGYF
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_03g0006450 | OsNaBo_03g0006450.01 | Chr03 | 4686057 | 4693870 | - | NAM | ||
| CDS seq | atggcggaggggcggcgctacgcgatcgcgccgcagctagatattgagcagatactgaaggaggctcaacgccgatggttacgtccgactgaaatttgtgaaatacttaagaattacaggagtttccgtattgctcctgaacctccaaataggcctccaagtggttcacttttcttgtttgatcggaaggtcctgagatatttcaggaaggacggtcataattggaggaagaaaagagatggaaagacagtcaaagaagcccatgaaaggttaaagtctggaagcattgatgtgcttcattgctactatgctcatggggaggagaatataaatttccaaaggaggagttattggatgttggaggaggattacatgcacattgtacttgtacattatctggaagtcaaggctggaaaattaagctctcgtagtacgggacatgatgatgtactgcaagtatctcatgcggatagccctttaagtcaattgccttcacaaactaccgaaggagaaagctcagttagcggacaggcctctgaatatgatgaaacagaatcagatatttattcgggaggagccagatacaactctttctctcggatgcggcagcatgaaaatggaggtggatctgtgattgatgattctatattcagctcttatgttcctgcgtcatctgtaggcagttatcaaggattacaggctacagcacctaatacaggcttctattctcatggtcaagataacttacccgtggttcttaacgagtcagaccttgggactgcatttaatggccctaatagtcagtttgatctatcattatggattgaagcaatgaaacctgacaaagggacccatcaaattcctctttaccaagctcctgttccctccgaacagtctccttttacaggaggcccaggaattgaatctttcacatttgatgaagtatacaacaatggactgagtatcaaggatgtagatggtgatgatacagatggagaaactccatggcagattccaaatgcaagtggtacatttgctacagtggacagctttcaacaaaatgataaaactttggaggaagccattaattaccctctcttgaaaactcaatcatctagtctttctgatatcataaaggacagttttaagaaaaatgacagtttcactagatggatgagcaaagagcttgctgaagtagatgattctcaaatcacatctagttctggagtgtactggaacagtgaagaagctgacaatatcattgaagcatcaagcagtgatcagtatactctgggaccagtgcttgcacaagatcagctgtttactatagttgatttttctccaacctggacatatgcaggttcaaagactagggtatttattaaaggtaatttcttaagttctgatgaagttaagagattaaaatggtcatgcatgtttggagaatttgaagtcccagctgagattatagcagatgatactcttgtatgtcattctccctcacacaagcctggcagggtccctttctatgtgacttgctccaatagattggcctgcagtgaagtacgggagtttgatttccgacctcagtacatggatgctccaagtccacttggttctacaaacaaaatatatctccagaagcgtcttgataaactattgtctgtggagcaagatgagatccagacaactctgtctaaccccacgaaggagattattgatttgagcaagaagataagttcattgatgatgaacaatgatgattggtctgagttgctaaagttggctgatgataatgagcctgccacagatgataagcaagatcagttccttcaaaaccgcattaaggaaaaattgcatatctggcttctccataaagtaggggatggaggcaaaggtcccagtatgttagatgaggaggggcagggtgtgcttcatttggcagctgccctagggtacgattgggcaataagaccaacaatagctgctggtgtgaatataaacttcagagatgctcatggatggactgcactccactgggctgcattttgtggaagagagcggacagtcgttgcacttatagcactaggtgcagctcctggagctgtaacagacccaacaccaagtttcccttcaggaagcacaccagctgatcttgcatcagccaacggacacaagggaatctctggtttcctagcagagtcttctttaacaagtcatctgcagactctcaatctaaaggaagccatgcgtagcagtgcaggagaaatatctggtctacctggcattgtaaatgttgctgatagaagcgcctcgcctttggcagttgaaggccatcagactggatctatgggagattcactaggtgctgttcgtaatgccgcccaagctgctgcccggatataccaagtttttaggatgcaatccttccagagaaaacaagcagttcagtatgaggatgaaaatggtgcgatatcagatgagcgtgccatgtcactcttgtctgctaaaccatccaaacctgcacagcttgatcctctgcatgctgctgcgactcgaatacaaaacaagttccgtggatggaagggaagaaaagaatttctgcttattagacagcgaatcgtcaagatccaggcgcatgtgcgaggtcaccaagtgagaaagcattatcgcaaaataatttggtctgttgggatagtggagaaggttatattgcgctggaggcgacgaggtgctgggttgcgtgggtttcgacccacagaaaatgcagtcacagagagtactagcagcagcagtggcaacgtgacccaaaacagacctgccgagaatgactatgatttcttacaagaaggacggaagcagactgaagaaaggctacagaaagctcttgccagagtgaaatccatggttcaatacccagatgccagggatcagtaccagaggattttgacggtggtaactaaaatgcaggaatcccaggctatgcaagaaaagatgctcgaggagtcgacagagatggatgaaggccttttgatgagcgaattcaaagaactgtgggatgacgacatgccaacgcctggatatttctag
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| Protein seq | MAEGRRYAIAPQLDIEQILKEAQRRWLRPTEICEILKNYRSFRIAPEPPNRPPSGSLFLFDRKVLRYFRKDGHNWRKKRDGKTVKEAHERLKSGSIDVLHCYYAHGEENINFQRRSYWMLEEDYMHIVLVHYLEVKAGKLSSRSTGHDDVLQVSHADSPLSQLPSQTTEGESSVSGQASEYDETESDIYSGGARYNSFSRMRQHENGGGSVIDDSIFSSYVPASSVGSYQGLQATAPNTGFYSHGQDNLPVVLNESDLGTAFNGPNSQFDLSLWIEAMKPDKGTHQIPLYQAPVPSEQSPFTGGPGIESFTFDEVYNNGLSIKDVDGDDTDGETPWQIPNASGTFATVDSFQQNDKTLEEAINYPLLKTQSSSLSDIIKDSFKKNDSFTRWMSKELAEVDDSQITSSSGVYWNSEEADNIIEASSSDQYTLGPVLAQDQLFTIVDFSPTWTYAGSKTRVFIKGNFLSSDEVKRLKWSCMFGEFEVPAEIIADDTLVCHSPSHKPGRVPFYVTCSNRLACSEVREFDFRPQYMDAPSPLGSTNKIYLQKRLDKLLSVEQDEIQTTLSNPTKEIIDLSKKISSLMMNNDDWSELLKLADDNEPATDDKQDQFLQNRIKEKLHIWLLHKVGDGGKGPSMLDEEGQGVLHLAAALGYDWAIRPTIAAGVNINFRDAHGWTALHWAAFCGRERTVVALIALGAAPGAVTDPTPSFPSGSTPADLASANGHKGISGFLAESSLTSHLQTLNLKEAMRSSAGEISGLPGIVNVADRSASPLAVEGHQTGSMGDSLGAVRNAAQAAARIYQVFRMQSFQRKQAVQYEDENGAISDERAMSLLSAKPSKPAQLDPLHAAATRIQNKFRGWKGRKEFLLIRQRIVKIQAHVRGHQVRKHYRKIIWSVGIVEKVILRWRRRGAGLRGFRPTENAVTESTSSSSGNVTQNRPAENDYDFLQEGRKQTEERLQKALARVKSMVQYPDARDQYQRILTVVTKMQESQAMQEKMLEESTEMDEGLLMSEFKELWDDDMPTPGYF
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A3 | Chr03 | 4690814 | 4690927 | - | OsNaBo_03g0006450.02 | OsNaBo_03g0006450.01,OsNaBo_03g0006450.02 | All |
| SE | Chr03 | 4691077 | 4691819 | - | OsNaBo_03g0006450.02 | OsNaBo_03g0006450.01,OsNaBo_03g0006450.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 3.250453 | 29.833883 | 11.858430 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0191000 | RBH | 5.166250 | 3.429619 | 9.821983 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g09100 | RBH | 3.257440 | 2.183284 | 2.452367 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0191000 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0006690 | RBH | 1.654774 | 25.374800 | 11.624902 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0006670 | RBH | 0.461410 | 6.602324 | 4.920091 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0006720 | RBH | 4.387051 | 14.034484 | 17.999041 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0006690 | RBH | 0.571273 | 0.475493 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0006610 | RBH | 9.303698 | 28.920538 | 32.273975 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0078000 | RBH | 15.045561 | 50.4092125 | 47.716349 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0006540 | RBH | 0.340855 | 1.071044 | 2.774185 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0078300 | RBH | 16.7415185 | 52.2938635 | 11.018293 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0006570 | RBH | 0.438540 | 0.445853 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0006630 | RBH | 0.686065 | 16.524479 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0006600 | RBH | 6.020382 | 38.014317 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0006610 | RBH | 1.164411 | 1.839541 | 2.763084 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0006590 | RBH | 0.574542 | 9.835147 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G006630 | RBH | 1.557628 | 4.079189 | 5.291543 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0008810 | RBH | 5.314198 | 34.076817 | 13.921034 |
