Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_03g0003170 | OGI:03006350 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr03:2380580-2381536 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ttagctagtagcccagtactcgcccccgctcgagccttcgccgcagctgccatcgccgtcgacgagcctccagaggctgtcccagatcgcatcatcatcggcggggagcacgcagtcgtcgggcaccaccgagaccgccgtgcagcaacgctccttgctctggagatcgttcatcatcatcatcatcaccatggaatcgtcagctgcctcctcctgcgggctctgctgctcctgctcctgcagcaacatcatctgctgttgctgttgctgttgctgttgctgaagctgctgctgctgctgctgcagaaggttcaggctatggagatactggcgatgctgctgctgctgctggagctggtactggtgcagcagctgcgcccgcgcacgccgcgacggcctcgccttcttgaagtgcgtcctccagtagttcttgatctcgttgtccgtcctccccggcaggcaccgcgcgatcgccgaccatctgcacgcgtacgcaccgccaccgccacggttaattaggcaccaacgcacccagcacagtagaacagtgcaggctacagtgtgcaatggctcaagctcatgcaccacacagctccatacctgttgccgagcatggcgtgcagctggaggatgacggtctcctcgtcgggggtgatcttcccccgcttcaggtccggcctgaggtagttcacccaccgcagccggcagctcttcccgctgcgcctcagccctgcacatcactgaattttgatcttgattctgaacaaaaagttcagagctgaaacattctgaacatgatcgatcagctcgatcgacgatacctgtgagcttggccacggagttccagctgccttcgccgtgctgctgcacgtactcggtcaggagcctgtcctccagcgcagtccacgggcccttcctccacccttgctgcagcatcaggcttctgatctcgtccat
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| CDS seq | atggacgagatcagaagcctgatgctgcagcaagggtggaggaagggcccgtggactgcgctggaggacaggctcctgaccgagtacgtgcagcagcacggcgaaggcagctggaactccgtggccaagctcacagggctgaggcgcagcgggaagagctgccggctgcggtgggtgaactacctcaggccggacctgaagcgggggaagatcacccccgacgaggagaccgtcatcctccagctgcacgccatgctcggcaacaggtatggagctcgttgctgcacggcggtctcggtggtgcccgacgactgcgtgctccccgccgatgatgatgcgatctgggacagcctctggaggctcgtcgacggcgatggcagctgcggcgaaggctcgagcgggggcgagtactgggctactagctaa
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| Protein seq | MDEIRSLMLQQGWRKGPWTALEDRLLTEYVQQHGEGSWNSVAKLTGLRRSGKSCRLRWVNYLRPDLKRGKITPDEETVILQLHAMLGNRYGARCCTAVSVVPDDCVLPADDDAIWDSLWRLVDGDGSCGEGSSGGEYWATS |
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| Function | Transcription factor MYB101 [UniProtKB/Swiss-Prot:O80883] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_03g0003170 | OsNaBo_03g0003170.01 | Chr03 | 2380580 | 2381536 | - | NAM | ||
| CDS seq | atggacgagatcagaagcctgatgctgcagcaagggtggaggaagggcccgtggactgcgctggaggacaggctcctgaccgagtacgtgcagcagcacggcgaaggcagctggaactccgtggccaagctcacagggctgaggcgcagcgggaagagctgccggctgcggtgggtgaactacctcaggccggacctgaagcgggggaagatcacccccgacgaggagaccgtcatcctccagctgcacgccatgctcggcaacaggtatggagctcgttgctgcacggcggtctcggtggtgcccgacgactgcgtgctccccgccgatgatgatgcgatctgggacagcctctggaggctcgtcgacggcgatggcagctgcggcgaaggctcgagcgggggcgagtactgggctactagctaa
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| Protein seq | MDEIRSLMLQQGWRKGPWTALEDRLLTEYVQQHGEGSWNSVAKLTGLRRSGKSCRLRWVNYLRPDLKRGKITPDEETVILQLHAMLGNRYGARCCTAVSVVPDDCVLPADDDAIWDSLWRLVDGDGSCGEGSSGGEYWATS |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.000000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0142600 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g04900 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0142600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0003300 | RBH | 0.0 | 0.000000 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0003230 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0003280 | RBH | 0.0 | 3.715767 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0003220 | RBH | 0.0 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0003320 | RBH | 0.0 | 7.846932 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0037100 | RBH | 0 | 0.960819 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0003210 | RBH | 0.0 | 0.229299 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0038300 | RBH | 0 | 0.4937995 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0003320 | RBH | 0.0 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0003290 | RBH | 0.0 | 3.545819 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0003240 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0003320 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0003300 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G003270 | RBH | 0.0 | 0.000000 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
