Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_03g0002470 | OGI:03005100 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr03:1863838-1865783 | ||||||||
| Gene Symbol | NAC22, ONAC022, ONAC22 | ||||||||||
| DNA seq | agcattgtcaagtcagaaagcatcatattatcttgagagaagaccaaaagattgattgatatctcggtgctactactatatgtacaatcgaatccacagctagccattctacgctacttgttcttcgtcgacgggtgatttgatctcttgctcttgcacatgcatctggagatcgtgatcgactcctcttgcttcgatgcacaatgtaattctctgccccttgcttagtagtagagcagatgggcgtagggagacaggcagtgctggtcctgccacgggctgcgcagctgcgtcaggaacgggtcctgcagccagtccatcgccggaagctgcaggctcggcagctggctcaccgccgggagctgtaggctcgtcgccgacgccaccgtgaccgtgacgtctgcttcttccttcttggcttcccttggtgcgccagcgccgccgttcttgctgctgctgccggacggcgccgccgacgaggatgaggactggatcaggaagccgctgtcgtggacgtcgtccgacgagaagtagtcgtcgccggtggaggcggaggcgtcgtggacgagggatgctctcgtcgccgtgtagtctccgtgacttgatcctctctgcatctcttccattgccgaggctctctgctccagctccttcagtggcgtcgccttccggtatatcttgcagagcaccatgtcctcctgcagccaaacacagtgtgagaaaaatccaagttaaaattgtactactagtggagtaTtttttctctggagtaaatttacatgtacaatggtaaaaatcaaggcagtcaactcccaagtcaaccgtgtcaattcttaattcttaatgcttggtgcgctttcgtggaatatctacatcattgatactgcaagtctactgggacaacgactacattgcaccccattttcacaccaaaaacaaccaaattaatgagagcattcactgccaatgtactaatactctaatactagtactacatatgacatgatcattgttcgttcaaaaaagaaataaatgacataatcattctcacttcattccgatcattttttttgtgaccattttaagaattcagtagtactAatattttgcgatcacttaaaggattcgttctaataattaactctgcaactgattgttcttgttaattgctaagagagcattagtttaaccttgggaggcggcgcggcggcgcgggcggcgccgtagtcggggaggcggtactcgttcatgacccagtccgtcttggtgccgcgcggggcgcgaccctggtagaagacgagcgtcttcttgagcccgatcacccgcttcgggtcgccggagctccggatcgccctgtccgaCcccgtcgccttccagaacccgcgctccgtcgtccggttcggccgcccgccgttcccggccttcctgtcccgcggcacgaagaagtaccactccctctccccgatcttcgccatgcctgcacatttttacaagaaacacacacatcatcatcatcagatcatccagctcaaacactgtctccgttcttgctgaactctcactgtgtgttggtgtttacctgggaggtcccagggatcatggcggtagatgttgagggtgccgatgatgttgaagtggagcttcttgcctaggacgacgcgggagaggtagaagtcgaggagctcctcctccgtggggtggaaacggaagcccGggGAGGTCCTGCTCCACCTCCATGGACGGCCCAGCCACAGCCACTGCCGCCGCCATTGATGACAGTGTGCTCTGCTCGCTCGCTCGTTCGCTCTGCTCCAGGTGGTGGTGGTGGTTGCCTCTGCACTTGGCTTGCCGATCTTGATTTTTACTGGAGACGATGGACGAGGTGAGGTGGAGATGGTTGTGGATGTGGAGGCAACGAGCTTATATAGAAAAGAAAGGCATTGCAT
More
|
||||||||||
| CDS seq | ATGCAATGCCTTTCTTTTCTATATAAGCTCGTTGCCTCCACATCCACAACCATCTCCACCTCACCTCGTCCATCGTCTCCAGTAAAAATCAAGATCGGCAAGCCAAGTGCAGAGGCAACCACCACCACCACCTGGAGCAGAGCGAACGAGCGAGCGAGCAGAGCACACTGTCATCAATGGCGGCGGCAGTGGCTGTGGCTGGGCCGTCCATGGAGGTGGAGCAGGACCTCccCgggcttccgtttccaccccacggaggaggagctcctcgacttctacctctcccgcgtcgtcctaggcaagaagctccacttcaacatcatcggcaccctcaacatctaccgccatgatccctgggacctcccaggcatggcgaagatcggggagagggagtggtacttcttcgtgccgcgggacaggaaggccgggaacggcgggcggccgaaccggacgacggagcgcgggttctggaaggcgacgggGtcggacagggcgatccggagctccggcgacccgaagcgggtgatcgggctcaagaagacgctcgtcttctaccagggtcgcgccccgcgcggcaccaagacggactgggtcatgaacgagtaccgcctccccgactacggcgccgcccgcgccgccgcgccgcctcccaaggaggacatggtgctctgcaagatataccggaaggcgacgccactgaaggagctggagcagagagcctcggcaatggaagagatgcagagaggatcaagtcacggagactacacggcgacgagagcatccctcgtccacgacgcctccgcctccaccggcgacgactacttctcgtcggacgacgtccacgacagcggcttcctgatccagtcctcatcctcgtcggcggcgccgtccggcagcagcagcaagaacggcggcgctggcgcaccaagggaagccaagaaggaagaagcagacgtcacggtcacggtggcgtcggcgacgagcctacagctcccggcggtgagccagctgccgagcctgcagcttccggcgatggactggctgcaggacccgttcctgacgcagctgcgcagcccgtggcaggaccagcactgcctgtctccctacgcccatctgctctactactaa
More
|
||||||||||
| Protein seq | MQCLSFLYKLVASTSTTISTSPRPSSPVKIKIGKPSAEATTTTTWSRANERASRAHCHQWRRQWLWLGRPWRWSRTSPGFRFHPTEEELLDFYLSRVVLGKKLHFNIIGTLNIYRHDPWDLPGMAKIGEREWYFFVPRDRKAGNGGRPNRTTERGFWKATGSDRAIRSSGDPKRVIGLKKTLVFYQGRAPRGTKTDWVMNEYRLPDYGAARAAAPPPKEDMVLCKIYRKATPLKELEQRASAMEEMQRGSSHGDYTATRASLVHDASASTGDDYFSSDDVHDSGFLIQSSSSSAAPSGSSSKNGGAGAPREAKKEEADVTVTVASATSLQLPAVSQLPSLQLPAMDWLQDPFLTQLRSPWQDQHCLSPYAHLLYY |
||||||||||
| Function | NAC domain-containing protein 22 [UniProtKB/Swiss-Prot:Q10S65] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_03g0002470 | OsNaBo_03g0002470.01 | Chr03 | 1863838 | 1865783 | - | NAM | ||
| CDS seq | ATGCAATGCCTTTCTTTTCTATATAAGCTCGTTGCCTCCACATCCACAACCATCTCCACCTCACCTCGTCCATCGTCTCCAGTAAAAATCAAGATCGGCAAGCCAAGTGCAGAGGCAACCACCACCACCACCTGGAGCAGAGCGAACGAGCGAGCGAGCAGAGCACACTGTCATCAATGGCGGCGGCAGTGGCTGTGGCTGGGCCGTCCATGGAGGTGGAGCAGGACCTCccCgggcttccgtttccaccccacggaggaggagctcctcgacttctacctctcccgcgtcgtcctaggcaagaagctccacttcaacatcatcggcaccctcaacatctaccgccatgatccctgggacctcccaggcatggcgaagatcggggagagggagtggtacttcttcgtgccgcgggacaggaaggccgggaacggcgggcggccgaaccggacgacggagcgcgggttctggaaggcgacgggGtcggacagggcgatccggagctccggcgacccgaagcgggtgatcgggctcaagaagacgctcgtcttctaccagggtcgcgccccgcgcggcaccaagacggactgggtcatgaacgagtaccgcctccccgactacggcgccgcccgcgccgccgcgccgcctcccaaggaggacatggtgctctgcaagatataccggaaggcgacgccactgaaggagctggagcagagagcctcggcaatggaagagatgcagagaggatcaagtcacggagactacacggcgacgagagcatccctcgtccacgacgcctccgcctccaccggcgacgactacttctcgtcggacgacgtccacgacagcggcttcctgatccagtcctcatcctcgtcggcggcgccgtccggcagcagcagcaagaacggcggcgctggcgcaccaagggaagccaagaaggaagaagcagacgtcacggtcacggtggcgtcggcgacgagcctacagctcccggcggtgagccagctgccgagcctgcagcttccggcgatggactggctgcaggacccgttcctgacgcagctgcgcagcccgtggcaggaccagcactgcctgtctccctacgcccatctgctctactactaa
More
|
|||||||
| Protein seq | MQCLSFLYKLVASTSTTISTSPRPSSPVKIKIGKPSAEATTTTTWSRANERASRAHCHQWRRQWLWLGRPWRWSRTSPGFRFHPTEEELLDFYLSRVVLGKKLHFNIIGTLNIYRHDPWDLPGMAKIGEREWYFFVPRDRKAGNGGRPNRTTERGFWKATGSDRAIRSSGDPKRVIGLKKTLVFYQGRAPRGTKTDWVMNEYRLPDYGAARAAAPPPKEDMVLCKIYRKATPLKELEQRASAMEEMQRGSSHGDYTATRASLVHDASASTGDDYFSSDDVHDSGFLIQSSSSSAAPSGSSSKNGGAGAPREAKKEEADVTVTVASATSLQLPAVSQLPSLQLPAMDWLQDPFLTQLRSPWQDQHCLSPYAHLLYY
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.296591 | 0.0 | 0.000000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0133000 | RBH | 0.567359 | 1.181946 | 1.172161 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g04070 | RBH | 0.375119 | 1.165406 | 0.354085 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0133000 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0002630 | RBH | 0.000000 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0002600 | RBH | 0.0 | 0.0 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0002630 | RBH | 0.000000 | 1.709288 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0002600 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0002640 | RBH | 2.013145 | 0.000000 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0029300 | RBH | 1.1386275 | 24.6912485 | 1.1023035 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0002590 | RBH | 0.223282 | 0.0 | 0.094804 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0030500 | RBH | 2.0074785 | 36.7350175 | 0.2261285 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0002670 | RBH | 0.151581 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0002670 | RBH | 0.000000 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0002640 | RBH | 0.000000 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0002680 | RBH | 0.0 | 0.000000 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0002660 | RBH | 0.181640 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G002650 | RBH | 0.180505 | 0.0 | 0.269530 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0029510 | RBH | 0.0 | 17.465260 | 0.0 |
