Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_02g0036550 | OGI:02095200 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr02:35617261-35619951 | ||||||||
| Gene Symbol | OsFbox114, Os_F0103 | ||||||||||
| DNA seq | ggattgcaaaaggcacgatatatataacaaaggtcatttttctcctgctaataagtacagagatatcaaaggaacgaactgcctgaacatatgcagagcaccatcagctctctcacaacttatctgtcgggaaaagaaagaggtagtacagcacgcccttaaaccgaagaatactacgggtactcagatattggaacatgatcagccgttactgaggtcaagaagtgaaatttggcaaacgagttcccctcgttgatcctcttcttcagtgaacacctctgcctcttcgtccgtgggaacttacacggccttcggatgtccttacacgtgtcacacgccagcatgttgtacaggaacacatcctccagattcacggccacttccatgatacgcttgataaacgcaaccaagaagtcttcagattggaagcagaagatggtgagaacggacaggttgtggtgcttgaaatcctcagcagaagattcccactctacactcttgttcgagctgtacaaagacgccctcatctcctcgtccttttccatgttacaccaatgatcccatacctgcatgaatgccacgcatatacaagaaaatggtgataagaaataagtttgtggttttgcttgcagctgtatgaaaactgaaaaagcaagcaaaagttttatatcaggtgcaggtgcttgcagctgtgtgaaaatggagtgtcagatagcaacacaccgtcatgcgtagctccttcaggaaaggcgctgcttcgagaatgaacattgtccatgtgagatcacatccttcaggaacacgaaacagattcacaagccttaatttgtagaaaacagatgccagtttttgtggtaattctggttgaacccaaatctggaaggaaaaaaaaagtgagtcgagtagagaggagactagctcagcaaaaacgattaccaccaacttaccttttcactcttaaaattcaaacgtagatctcttacagagatctttccaaggatcttacttagcttgaccaacttgtgccttttaagaccaacacctgcaagccgtaccgcctcgagtgagggcacataaccaaaagtcaggggatcttggaaagatagccaaccctcaaccatcaattgtgcaagtttcggcaagcagttgagcttgatgctttcaaaacggcagttggcaatattgagcacattgagctgtggatgttcaagttgcagcacggtcaaatttcctgaatcgcagttgaacaaacgcaaatactgtaaattctgacaggtcttgaggacgttgtggatgtccgattcaccaaatcttagattccctactatgaggcgtgtgagaccaccaaatgcagttgggcaagcatcgaaaaatgacatgaatcgtctcccgtaatcgatcaaatcatcatcagtgcaacgggtgggtagcttctccactataattgtgaattcggccatctcaaccttttgtgttgtcatggcatgtccaacagtttgtccaattgagatacagtcaccttcattcaggtagaacagcatgcgcaagaggtggatggtatattcatctggattcctgcgttccaagatgctcttcgttgcttcaacaacagcggcattggtccagaccaacacatcatcagataacatggacgcaccattaggcatgaagtgaacaaagtctataaccaattgagaaagcatagaagggagatgcctccaccgtctggagaggacactggttcttgcagcatcgcggacatggagccggtcaaggatgttaagcagaatatcatcaggtaacttgcttagcctgtcactgcctttctgcatttgaccaccaattacaaccacaatcaattcaaaatttaagcattattactggtcaaaagtaaaagagtaatagatgccatgcaaatgatatcatcctactcctactgggcacataacatagcaggcaaaaaagggagggaaggagatgacttacgcggttcatggttgctccaatgcaatggcccttggatgccgctctgttctgcttgccctctatgaaatcttggtggtacaaggcaaccagcagttcactatcttattttcctccaaccatagaatccttctatgaacgattctgtacaataaggaattgttagattgatacccaaatgtgttccaaaaaaagctgataaccaaataaactttaccctttttggcaatgccagtgtaattcagtactgtttgattagcttccaattaagtcacagtgttttgacgcatgatttccgtgcagccttgctcacggctgcttcctccactagatcaaattcccaattgcccccccccccccccccccaaaaaaaaaaaaacaacacatcaatctgacggaatttctcgatccaaccgcatacaacgaagcgtgcactatccaatacagcatgccaagtagagagactagagagaggggagcgacgcaacgtactcacaggttgacgacgagcaacgcgatgcaccggtgatacgagcggcggaggaacgcaggcggatggccggccgacggggaggcgaggcggcggaggaacgcaggcggacggctggccgacggggagggcggcgctggcgacgtgagcggcgcggctcggaagcggcccgcgctgcgtcggcggcgggagacgaggaaggccgcggcgtttgcgcc
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| CDS seq | atgaaccgcaaaggcagtgacaggctaagcaagttacctgatgatattctgcttaacatccttgaccggctccatgtccgcgatgctgcaagaaccagtgtcctctccagacggtggaggcatctcccttctatgctttctcaattggttatagactttgttcacttcatgcctaatggtgcgtccatgttatctgatgatgtgttggtctggaccaatgccgctgttgttgaagcaacgaagagcatcttggaacgcaggaatccagatgaatataccatccacctcttgcgcatgctgttctacctgaatgaaggtgactgtatctcaattggacaaactgttggacatgccatgacaacacaaaaggttgagatggccgaattcacaattatagtggagaagctacccacccgttgcactgatgatgatttgatcgattacgggagacgattcatgtcatttttcgatgcttgcccaactgcatttggtggtctcacacgcctcatagtagggaatctaagatttggtgaatcggacatccacaacgtcctcaagacctgtcagaatttacagtatttgcgtttgttcaactgcgattcaggaaatttgaccgtgctgcaacttgaacatccacagctcaatgtgctcaatattgccaactgccgttttgaaagcatcaagctcaactgcttgccgaaacttgcacaattgatggttgagggttggctatctttccaagatcccctgacttttggttatgtgccctcactcgaggcggtacggcttgcaggtgttggtcttaaaaggcacaagttggtcaagctaagtaagatccttggaaagatctctgtaagagatctacgtttgaattttaagagtgaaaagatttgggttcaaccagaattaccacaaaaactggcatctgttttctacaaattaaggcttgtgaatctgtttcgtgttcctgaaggatgtgatctcacatggacaatgttcattctcgaagcagcgcctttcctgaaggagctacgcatgacggtatgggatcattggtgtaacatggaaaaggacgaggagatgagggcgtctttgtacagctcgaacaagagtgtagagtgggaatcttctgctgaggatttcaagcaccacaacctgtccgttctcaccatcttctgcttccaatctgaagacttcttggttgcgtttatcaagcgtatcatggaagtggccgtgaatctggaggatgtgttcctgtacaacatgctggcgtgtgacacgtgtaaggacatccgaaggccgtgtaagttcccacggacgaagaggcagaggtgttcactgaagaagaggatcaacgaggggaactcgtttgccaaatttcacttcttgacctcagtaacggctgatcatgttccaatatctgagtacccgtag
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| Protein seq | MNRKGSDRLSKLPDDILLNILDRLHVRDAARTSVLSRRWRHLPSMLSQLVIDFVHFMPNGASMLSDDVLVWTNAAVVEATKSILERRNPDEYTIHLLRMLFYLNEGDCISIGQTVGHAMTTQKVEMAEFTIIVEKLPTRCTDDDLIDYGRRFMSFFDACPTAFGGLTRLIVGNLRFGESDIHNVLKTCQNLQYLRLFNCDSGNLTVLQLEHPQLNVLNIANCRFESIKLNCLPKLAQLMVEGWLSFQDPLTFGYVPSLEAVRLAGVGLKRHKLVKLSKILGKISVRDLRLNFKSEKIWVQPELPQKLASVFYKLRLVNLFRVPEGCDLTWTMFILEAAPFLKELRMTVWDHWCNMEKDEEMRASLYSSNKSVEWESSAEDFKHHNLSVLTIFCFQSEDFLVAFIKRIMEVAVNLEDVFLYNMLACDTCKDIRRPCKFPRTKRQRCSLKKRINEGNSFAKFHFLTSVTADHVPISEYP |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_02g0036550 | OsNaBo_02g0036550.01 | Chr02 | 35617261 | 35619951 | - | NAM | ||
| CDS seq | atgaaccgcaaaggcagtgacaggctaagcaagttacctgatgatattctgcttaacatccttgaccggctccatgtccgcgatgctgcaagaaccagtgtcctctccagacggtggaggcatctcccttctatgctttctcaattggttatagactttgttcacttcatgcctaatggtgcgtccatgttatctgatgatgtgttggtctggaccaatgccgctgttgttgaagcaacgaagagcatcttggaacgcaggaatccagatgaatataccatccacctcttgcgcatgctgttctacctgaatgaaggtgactgtatctcaattggacaaactgttggacatgccatgacaacacaaaaggttgagatggccgaattcacaattatagtggagaagctacccacccgttgcactgatgatgatttgatcgattacgggagacgattcatgtcatttttcgatgcttgcccaactgcatttggtggtctcacacgcctcatagtagggaatctaagatttggtgaatcggacatccacaacgtcctcaagacctgtcagaatttacagtatttgcgtttgttcaactgcgattcaggaaatttgaccgtgctgcaacttgaacatccacagctcaatgtgctcaatattgccaactgccgttttgaaagcatcaagctcaactgcttgccgaaacttgcacaattgatggttgagggttggctatctttccaagatcccctgacttttggttatgtgccctcactcgaggcggtacggcttgcaggtgttggtcttaaaaggcacaagttggtcaagctaagtaagatccttggaaagatctctgtaagagatctacgtttgaattttaagagtgaaaagatttgggttcaaccagaattaccacaaaaactggcatctgttttctacaaattaaggcttgtgaatctgtttcgtgttcctgaaggatgtgatctcacatggacaatgttcattctcgaagcagcgcctttcctgaaggagctacgcatgacggtatgggatcattggtgtaacatggaaaaggacgaggagatgagggcgtctttgtacagctcgaacaagagtgtagagtgggaatcttctgctgaggatttcaagcaccacaacctgtccgttctcaccatcttctgcttccaatctgaagacttcttggttgcgtttatcaagcgtatcatggaagtggccgtgaatctggaggatgtgttcctgtacaacatgctggcgtgtgacacgtgtaaggacatccgaaggccgtgtaagttcccacggacgaagaggcagaggtgttcactgaagaagaggatcaacgaggggaactcgtttgccaaatttcacttcttgacctcagtaacggctgatcatgttccaatatctgagtacccgtag
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| Protein seq | MNRKGSDRLSKLPDDILLNILDRLHVRDAARTSVLSRRWRHLPSMLSQLVIDFVHFMPNGASMLSDDVLVWTNAAVVEATKSILERRNPDEYTIHLLRMLFYLNEGDCISIGQTVGHAMTTQKVEMAEFTIIVEKLPTRCTDDDLIDYGRRFMSFFDACPTAFGGLTRLIVGNLRFGESDIHNVLKTCQNLQYLRLFNCDSGNLTVLQLEHPQLNVLNIANCRFESIKLNCLPKLAQLMVEGWLSFQDPLTFGYVPSLEAVRLAGVGLKRHKLVKLSKILGKISVRDLRLNFKSEKIWVQPELPQKLASVFYKLRLVNLFRVPEGCDLTWTMFILEAAPFLKELRMTVWDHWCNMEKDEEMRASLYSSNKSVEWESSAEDFKHHNLSVLTIFCFQSEDFLVAFIKRIMEVAVNLEDVFLYNMLACDTCKDIRRPCKFPRTKRQRCSLKKRINEGNSFAKFHFLTSVTADHVPISEYP
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.402313 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0793500 | RBH | 0.233966 | 0.119969 | 1.337768 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g55050 | RBH | 0.158220 | 0.242068 | 0.344368 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0793500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0036720 | RBH | 0.145738 | 0.000000 | 1.462806 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0036830 | RBH | 0.131474 | 0.0 | 0.326512 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0036650 | RBH | 0.267698 | 0.0 | 2.371049 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0036290 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0036470 | RBH | 0.508173 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0552800 | RBH | 0.3827395 | 0.860121 | 1.72063 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0036260 | RBH | 0.000000 | 0.0 | 0.209397 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0583300 | RBH | 0.5102835 | 0.9759815 | 4.9412975 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0036510 | RBH | 0.017464 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0036340 | RBH | 0.000000 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0036570 | RBH | 0.0 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0036540 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0036160 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G036780 | RBH | 0.0 | 0.0 | 0.181877 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
