Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_02g0034660 | OGI:02091360 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr02:34204071-34209918 | ||||||||
| Gene Symbol | ERF21, OsERF#021, OsERF021, OsERF21, AP2/EREBP#140, AP2/EREBP140, ERF126, OsERF#126, OsERF126 | ||||||||||
| DNA seq | gagaataaatttaaccggtgttttccaacgcttgtccgttcaacggtgtttttcatttagagagcttataagagatctaattttacctcaactgacaaggttgatctctcaaccttcttgaaaaattgagcaaacatgaagtagacaacaggtcaaaggaaagcataatttataatttgatcgattttacactaaatgtcatacaaaattcactgaatcgacttatgtccattgtattaaaagaaacaatttacttccgagaagcctgtccttttaaacctgaattgagcatagtctcgaagccagcctcaaatccagcggtgtatgctgcattcttcagactcgtctgcagtgaaacacagccgcgtccgttacatgcttcacaacttaacgaggtagaaatctattgaagtccaaactgaagtacatcaccacaccaaactccaaacgtgggcagtttgatgcctgattttaccacaacgaaagtttcttatgaaggccttcacaaagaaattgtgacttgcaacatttacttaggcccatggcttttttttttgtttggttaatttttaccacagatgcttgttcgacacatattagtggaagctagggtatttaccacggttgcctatcatgaacacaaatgagcaatcagtgctaacatatagcagaagagaactaaccgttacactctccaaatcaatagtggcttgttctttaaagccatcaaatatagaagaaagttcttcctgcttaacattcagtttctttgatacctgcaaaagaaatttatcaacaaaaagagtggacattattcatgagggtcatcatgcacaatcttattacctcagaaaggaacaacggggacatgatgtcaaatacatcatttacaaatttctcaacattagctccgtttgtaggtatcttgctctgcgtcttttctgcacccttgttctgaactttaggcttagccttcacttctgatacaagaacaaagtatgccatgtctggttattgtaacttgaaagtgtaataaaaaaaaaacacaagaaaaatgtaaaagaaatggaggttaatgagtaaaagacaacatgaacaagttcacatgtttcatcctcacactgtcatctattcctgcttgtttaattaacaatagttgttataatacagtagtacctccttatagtagcactactactacgctcatgtactgcccaaatgtaaggactatagattgcatatacagaagaaataacaagggacaatatatatatcagtagataacagcttaccaggaagacatgttttctctttgggcacatcattttgacgaggaacatttgtaggtgtgaccttctcaattggttctgcagaatttgggacacctgatggtacaagatctgctagatcaggaggattatccttgcctacaactggtgaagcctgcacaaaaccaataatttcacaatcccttcccagcgcatactccctccatcccaaaaatataaggcacccttatttctaggaaaaatcaatattggtaacttttaactaataattaagctaataatatctatgtttagtgttacgcattcataacatttagacttgtgtatgaaagtactttcatatgatactaattttgtagttgttaataacattatggaagaaattaatgatcaaagtatgatattgagggccttataatttgggacggaaggaccgaatgaaatcatatgcacatattccggtgatccaaagattacctctaagtctacataagctggttgcctcccaatggacatgagaaacttgtccagattgcttgagctgagagctgaaatggagtaaatcaggaaaagaaagccattttactaatctattcttcttttgaaaaaagtaaagaaagttgaacggaggtctccctccttataaaaataatataacagtagccagaccaaggccttgtgcaacctacatgaaactgtgccatgataactaactaacggaatggtgtgcattctagtatcacagtaatgactaactaatgacattacacatggtgtgatgaaacagtgttggttacggaagtgataatagtatcaaccataccgattgtcacatcatttgtcagtggatggaagtagcagctctgttttgacttgaaaccttggtccagtagtagtgagacagcactgcttgcaaatacacagttatatgaatcagttaaaaaggcaatagcataaccatgaaaaaaactgatatataagtataatataataggacacattaaaagctaagcattataaaacaagaggcatgtggttccatcagtcacaaccatagcatttgcatttctaatttctatcctaaaagtggaaaccatcaagtggaatgaaaacaacgacgctcggatataaaatgagcacatcacactagtaaatagctcttcaccgtttagggtaaagtgaacagagctcacaaagttttttttttttttcaagtttaaaggcttcaagctattagaaatacaaattccacaacaatggaccgaattcccattccaatcatatttaattaacatgtgaaagcaagcacccataccttgcagactcattaagtagtgcaaatggagtaacacagcctaagggtacctggacataatcaaggacaaaatacattaacatgtgaagaaaattatatagggtgaaactataacaataagctatccagctaaaatgctggtagagccaggaacaccaaaattcaagtactcattaaagatgaaacagAaaaaggacaagacaatacatgaagggatatttgttttttcacaaccaacaatattcatcacaggcagaattttttttttaacttttgtgaaattttcacgtaatatatgaaactgaaagatgcactatatttcgctcttcgttgctttcaaacagtatgcagttttagataaacatgaataatggctgacctgaagcacttcaagcaaattttcctcaggagccatccgcagaccaccttttcccaaaccaagacgctgtgataaaactaatgggtttaaggaaaacagaaaattagttggcatacattcaaataagtaacaaagaggatatagttttcaagaaatgcacctacttttcatgtcaactttggtgccagcaagggcagaaacaacgtacagcctatgctttttgtcctgaaactcagaatttaaaaatatcaatacatgaaaataggttccaagcaattaactgtccatcacttggtaagacacataccttcagtagcaaatttttactcaaagcacctcctaaatgcccaacatgtttggcctaacattgcggaagttcaattagcacttacagtaaatccatcaaaagtattgtagaacgaagtgtgaacttcacggtttgcaaacctgttcctccaccgtcaacacaaccgggtgatcgtagcacgagaattcaatgttgagctcctgcacaagacaataccactaaattgagtcgcggtccactgtgatgccagaaggcaagcaattctagtttgccacacataggatgtgacaattctcgataatcgcacaatataactgggcaattccggccttcgattcatgcgcacatccggggttAaaaaaaaaaaaactatccgcagcacaacccaactaaattcggcagcaaaaacgccctatcgcgcttccatttataactatgctaaccaaaaccaaatcaagctagaacggaacgggaagcatctcgccgacgctacaatccgtagcaccggcgcatccacgaccaccaatccagccgatccccactaccaggaaacgacgcaaagcgaacagtcgaggagttgggaggtagagagcagtggtgcccagtgggcggcggcggcggcaccaacctggagtcgcgcgaggagctgctccttggtgtaccccatggccctcgcggcggcggcggcggcggcggaaggaaggaaggagacgagtagggcaaaggcgaggctgtctcggcctctcgggttcggatgcgaagctgctatggacgaggtggatcgggcattcgggcggctggacgacgcgcctttaacgggtcgggctcgtttcctcagatccgaactcgcattaccccgcgaaatgcggattcgggctcgagcgtgacgagaccgatacgtgactcctctcgtttttaccctctcTttttttttttgagatttggccggtcgctttcttctccgacggacactgcgattaatctaagcggcgcgccatgatccgctacgaaatccagctgttttacatgatagggaaaggaaattctctgttgcttttgaccacagctcacaacgcccatacccttttcttgcaaacatatacagatgcatactgcagttgatacgtgacagtataaaaataaatattgaccgcatcagctcgattagtaaataaaacgttttggatttgacaattagagaagcgggacaagtgtagcattttcagcagaggacggcgatggatcaaagctgggtactgaaatacgacagacgcatacgactgacaagggccccacagacacacacgcacagaagttaatttaatttcagtcgtaaggatcccggaaattctgcgtcgactagataccaatcatgccataactgcactagtaaaaaggaccattatgctttggacataagtagagaggagtataattaacatcatagtaattgattatacttcattacttgcaattgcaggaacaccacttttacacatggtatgacatggaattgaggggagttttgctccatggaaagctgccttaaaacatgtagcttcatcagagctcccacgcaattcagaattagcctaaaataatcaataagcagtagcactagtacattgattaagtatatactacatatatatatgtagataatagttatgaattgaatgattatatgattattattgtaccgtggccaattcttggtcacgtactgatatatcagtcagtaattgaatttgcgcttaatggtgatcactggagagtgtggaggcttcgatcgatcgatcacctccatggatttggtctccatcgatctccggttcgatcgatcagttgagggaggagaagctccagaggctgatctcaccttcgtcctcccactcggcggcgagggactccggcgccggcgagaagaacgtgctgcatgggtccatcatggagtagtccatgcacttgggcgactggaagaaggcgtcgatgtcggcgagcgcggcgtagtccacgtcgtcctcgcgcgccaccatgtcgtggtcggcgccgtagtagttggcggtctccggcgagctgacggccgagcacgacgacatgtcgccgtagctgcacggcggcgtggtgggcgcggccgcggggttgtagccgccggtggcggtggcgaaggaggcggcgccgctgtggtgctggagggggctggtggcattagcggcggcggcggcggcgacgcgctggatggacttgggggacatcgcggcggcggggatgtggaaggggaggtgcaccgggaagttgaggtcggcggcggagcccttgaggcagagcagcgcggcgtcgtaggcgcgcgccgccgcctcggcggtggagtaggacccgagccatatccgcgtcttctggttgggcgccctgatctccgacacccacgacccccagctccgcatcctcacccccttgtactgcctccctctccctcctcctcctccgccctgcctcgccgcagccgccgccgcattgccgccgctccccggcgccgcctcctgcccactcttcaccat
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| CDS seq | atggtgaagagtgggcaggaggcggcgccggggagcggcggcaatgcggcggcggctgcggcgaggcagggcggaggaggaggagggagagggaggcagtacaagggggtgaggatgcggagctgggggtcgtgggtgtcggagatcagggcgcccaaccagaagacgcggatatggctcgggtcctactccaccgccgaggcggcggcgcgcgcctacgacgccgcgctgctctgcctcaagggctccgccgccgacctcaacttcccggtgcacctccccttccacatccccgccgccgcgatgtcccccaagtccatccagcgcgtcgccgccgccgccgccgctaatgccaccagccccctccagcaccacagcggcgccgcctccttcgccaccgccaccggcggctacaaccccgcggccgcgcccaccacgccgccgtgcagctacggcgacatgtcgtcgtgctcggccgtcagctcgccggagaccgccaactactacggcgccgaccacgacatggtggcgcgcgaggacgacgtggactacgccgcgctcgccgacatcgacgccttcttccagtcgcccaagtgcatggactactccatgatggacccatgcagcacgttcttctcgccggcgccggagtccctcgccgccgagtgggaggacgaaggcgcgtcgtccagccgcccgaatgcccgatccacctcgtccatagcagcttcgcatccgaacccgagaggccgagacagcctcgcctttgccctactcgtctccttccttccttccgccgccgccgccgccgccgcgagggccatggggtacaccaaggagcagctcctcgcgcgactccaggagctcaacattgaattctcgtgctacgatcacccggttgtgttgacggtggaggaacaggccaaacatgttgggcatttaggaggtgctttgagtaaaaatttgctactgaaggacaaaaagcataggctgtacgttgtttctgcccttgctggcaccaaagttgacatgaaaattttatcacagcgtcttggtttgggaaaaggtggtctgcggatggctcctgaggaaaatttgcttgaagtgcttcaggtacccttaggctgtgttactccatttgcactacttaatgagtctgcaagcagtgctgtctcactactactggaccaaggtttcaagtcaaaacagagctgctacttccatccactgacaaatgatgtgacaatcggcaaggataatcctcctgatctagcagatcttgtaccatcaggtgtcccaaattctgcagaaccaattgagaaggtcacacctacaaatgttcctcgtcaaaatgatgtgcccaaagagaaaacatgtcttcctgaagtgaaggctaagcctaaagttcagaacaagggtgcagaaaagacgcagagcaagatacctacaaacggagctaatgttgagaaatttgtaaatgatgtatttgacatcatgtccccgttgttcctttctgaggtatcaaagaaactgaatgttaagcaggaagaactttcttctatatttgatggctttaaagaacaagccactattgatttggagagtgtaacgacgagtctgaagaatgcagcatacaccgctggatttgaggctggcttcgagactatgctcaattcaggtttaaaaggacaggcttctcggaagtaa
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| Protein seq | MVKSGQEAAPGSGGNAAAAAARQGGGGGGRGRQYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTAEAAARAYDAALLCLKGSAADLNFPVHLPFHIPAAAMSPKSIQRVAAAAAANATSPLQHHSGAASFATATGGYNPAAAPTTPPCSYGDMSSCSAVSSPETANYYGADHDMVAREDDVDYAALADIDAFFQSPKCMDYSMMDPCSTFFSPAPESLAAEWEDEGASSSRPNARSTSSIAASHPNPRGRDSLAFALLVSFLPSAAAAAAARAMGYTKEQLLARLQELNIEFSCYDHPVVLTVEEQAKHVGHLGGALSKNLLLKDKKHRLYVVSALAGTKVDMKILSQRLGLGKGGLRMAPEENLLEVLQVPLGCVTPFALLNESASSAVSLLLDQGFKSKQSCYFHPLTNDVTIGKDNPPDLADLVPSGVPNSAEPIEKVTPTNVPRQNDVPKEKTCLPEVKAKPKVQNKGAEKTQSKIPTNGANVEKFVNDVFDIMSPLFLSEVSKKLNVKQEELSSIFDGFKEQATIDLESVTTSLKNAAYTAGFEAGFETMLNSGLKGQASRK |
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| Function | Ethylene-responsive transcription factor ERF012 [UniProtKB/Swiss-Prot:Q9SFE4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_02g0034660 | OsNaBo_02g0034660.01 | Chr02 | 34204071 | 34209918 | - | NAM | ||
| CDS seq | atggtgaagagtgggcaggaggcggcgccggggagcggcggcaatgcggcggcggctgcggcgaggcagggcggaggaggaggagggagagggaggcagtacaagggggtgaggatgcggagctgggggtcgtgggtgtcggagatcagggcgcccaaccagaagacgcggatatggctcgggtcctactccaccgccgaggcggcggcgcgcgcctacgacgccgcgctgctctgcctcaagggctccgccgccgacctcaacttcccggtgcacctccccttccacatccccgccgccgcgatgtcccccaagtccatccagcgcgtcgccgccgccgccgccgctaatgccaccagccccctccagcaccacagcggcgccgcctccttcgccaccgccaccggcggctacaaccccgcggccgcgcccaccacgccgccgtgcagctacggcgacatgtcgtcgtgctcggccgtcagctcgccggagaccgccaactactacggcgccgaccacgacatggtggcgcgcgaggacgacgtggactacgccgcgctcgccgacatcgacgccttcttccagtcgcccaagtgcatggactactccatgatggacccatgcagcacgttcttctcgccggcgccggagtccctcgccgccgagtgggaggacgaaggcgcgtcgtccagccgcccgaatgcccgatccacctcgtccatagcagcttcgcatccgaacccgagaggccgagacagcctcgcctttgccctactcgtctccttccttccttccgccgccgccgccgccgccgcgagggccatggggtacaccaaggagcagctcctcgcgcgactccaggagctcaacattgaattctcgtgctacgatcacccggttgtgttgacggtggaggaacaggccaaacatgttgggcatttaggaggtgctttgagtaaaaatttgctactgaaggacaaaaagcataggctgtacgttgtttctgcccttgctggcaccaaagttgacatgaaaattttatcacagcgtcttggtttgggaaaaggtggtctgcggatggctcctgaggaaaatttgcttgaagtgcttcaggtacccttaggctgtgttactccatttgcactacttaatgagtctgcaagcagtgctgtctcactactactggaccaaggtttcaagtcaaaacagagctgctacttccatccactgacaaatgatgtgacaatcggcaaggataatcctcctgatctagcagatcttgtaccatcaggtgtcccaaattctgcagaaccaattgagaaggtcacacctacaaatgttcctcgtcaaaatgatgtgcccaaagagaaaacatgtcttcctgaagtgaaggctaagcctaaagttcagaacaagggtgcagaaaagacgcagagcaagatacctacaaacggagctaatgttgagaaatttgtaaatgatgtatttgacatcatgtccccgttgttcctttctgaggtatcaaagaaactgaatgttaagcaggaagaactttcttctatatttgatggctttaaagaacaagccactattgatttggagagtgtaacgacgagtctgaagaatgcagcatacaccgctggatttgaggctggcttcgagactatgctcaattcaggtttaaaaggacaggcttctcggaagtaa
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| Protein seq | MVKSGQEAAPGSGGNAAAAAARQGGGGGGRGRQYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTAEAAARAYDAALLCLKGSAADLNFPVHLPFHIPAAAMSPKSIQRVAAAAAANATSPLQHHSGAASFATATGGYNPAAAPTTPPCSYGDMSSCSAVSSPETANYYGADHDMVAREDDVDYAALADIDAFFQSPKCMDYSMMDPCSTFFSPAPESLAAEWEDEGASSSRPNARSTSSIAASHPNPRGRDSLAFALLVSFLPSAAAAAAARAMGYTKEQLLARLQELNIEFSCYDHPVVLTVEEQAKHVGHLGGALSKNLLLKDKKHRLYVVSALAGTKVDMKILSQRLGLGKGGLRMAPEENLLEVLQVPLGCVTPFALLNESASSAVSLLLDQGFKSKQSCYFHPLTNDVTIGKDNPPDLADLVPSGVPNSAEPIEKVTPTNVPRQNDVPKEKTCLPEVKAKPKVQNKGAEKTQSKIPTNGANVEKFVNDVFDIMSPLFLSEVSKKLNVKQEELSSIFDGFKEQATIDLESVTTSLKNAAYTAGFEAGFETMLNSGLKGQASRK
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_02g0034660 | OsNaBo_02g0034660.02 | Chr02 | 34204213 | 34208117 | - | IsoSeq | ||
| CDS seq | atccgaacccgagaggccgagacagcctcgcctttgccctactcgtctccttccttccttccgccgccgccgccgccgccgcgagggccatggggtacaccaaggagcagctcctcgcgcgactccaggagctcaacattgaattctcgtgctacgatcacccggttg |
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| Protein seq | IRTREAETASPLPYSSPSFLPPPPPPPRGPWGTPRSSSSRDSRSSTLNSRATITRL |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A3 | Chr02 | 34206265 | 34206675 | - | OsNaBo_02g0034660.01 | OsNaBo_02g0034660.02,OsNaBo_02g0034660.01 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.770628 | 21.333504 | 14.006204 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0767700 | RBH | 1.942491 | 3.456960 | 6.195271 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g52880 | RBH | 1.134938 | 2.008839 | 1.377864 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0767700 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0034960 | RBH | 0.526451 | 26.626461 | 3.198466 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0035050 | RBH | 0.465854 | 3.595218 | 3.187762 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0034920 | RBH | 0.428398 | 37.218700 | 9.159785 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0034500 | RBH | 0.340508 | 1.250082 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0034560 | RBH | 6.669508 | 29.117695 | 17.458981 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0528800 | RBH | 5.145635 | 11.00114 | 7.9520115 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0034410 | RBH | 0.197204 | 2.570184 | 1.498437 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0558700 | RBH | 9.067723 | 8.878577 | 19.5257905 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0034660 | RBH | 0.000000 | 0.029777 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0034490 | RBH | 0.154991 | 19.181961 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0034740 | RBH | 2.670564 | 9.922525 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0034690 | RBH | 0.735530 | 1.393235 | 0.562082 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0034280 | RBH | 0.000000 | 7.190963 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G034940 | RBH | 0.103189 | 8.091675 | 2.729472 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0007570 | RBH | 0.0 | 4.169880 | 0.0 |
