Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_02g0010120 | OGI:02023260 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr02:8113170-8116205 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | gaagaggatcaaaaaccacactgatactaatcatgatcgatttcttcctcgtgttggctacaatgatgctgcatgctgtacttccaacttgtctccatttctcgttgatgccaaaatggcaggctttgtgcaatcaaaacgaaaccctctcatgatcaaagtacaccacaacaacactctagctactggctactcctatcactacgcaaaagttgttgtaccaaccaataaagcgatcgatctcctactacgtaccattagtccagcagcaacgaagcacaagacaagaaattactcctccacccaacgaaagcattatttatttactgaccaaaagatcacctcacctctcccggctggctccgatcgaatcccctcctggattttgatacatcgattggattggatatgatgcagctatccacgatggagaaactgtgagtgttctctcgcgtgcaccatcatcgtcgtcgtcgtcatcgtcgtctccatcatggcgtctcgccgacgcctcctgcgggaggaggaggcgccggcctgatgtccttgagcacccccactacctgctgcatcgaaggcctcttctccggcgagtgcgccgtgcagaggaaccccacctgcaggcactccaccatctcccgctccgccaccgtcatcgttgtctttgctgctccactggtgccgccctcctcctcttcctctcttagcctcgcgtcgacgatgttgaggctctttcggttccggatcacacctcgggcccagctcaccgtcgaatcatcccatctcacctgtcctgtcacaagctcgaacaccagcacgccaaagctgtacacgtcactctctggggtcagctctccattgttactatccacggggtgtatgtagtccgatatcctaggctctaggtcatcgtcgaggaggatgttggttgggaccagattgccgtgcacaattggacgtcccgatgatcctgcccatccctggtgcaagaacgcgagccctcgtgcgattcctagtatgatgtggtaccgggtaggccaatcatctatggatttcttgtcctgctccgtggtgtcccacatatcagcaccggtttcttccatgtccatactacttgccggtagctcgtggagccaccggtagaggttgcccttctctatgtactcgtataggaggagtttctcctttcctgctcaaatgatgcaaaatttgaatttcaaattcatgaaaccaaggagttcaattgttattctatccatactttatataatatattgcgatgtaaaaatgtgtgaatttcaaaggatttcgctgaaacatactgttcaaatccacataaattaaattgttttacgtgaaagcaaaggaatttaattgttattctattcgtagttatatactataatacaatgtaaaaaccgaatgattttttagcaaaagaatagaagaagtgcagttagatcagctatcagttttcagcatgaagccattttcaaatttgtttttgccactctatcatacactgaaagatatgcttttggaattttgtctagactacacattctagtcaaagaacaagacaaattttagtggaaaacatgagtattatttctcaagtcattatctaaaaacaaattagttataTtttttttcaagcaaattggctgacctgcaatgcaatagccaaggagcggaagaatgtttgggtgcctgagccttgcaagttcccggagcccggcagccgccgccgcgacgtcgccgtcgtcgccgccgaccccggccaccgcgccatcgacgacgcgcacgacgacgtgcaggtcccccgggagcacggcgcggtacgcggcgccgctgcggccgccgacgtcggcgagctgcgactcgcgcccgaaccccgacgtcgccgcggcgaggtcggccagcgtcagctccatcagcggccgctcgaccagcaccaccggcgcggtggccaccaccttcaccgcgcccacggcgacctcgtcgtcctcccacgccgccgccgccttcttccctctcttcctccggcggctgaagccacacgccacgcaccctgccagtgccatgaacgccaccgcggcggacacggccaccacgccgcagaccacgacgacgacgatgagaacgacacgcttgtgcttcttcccgccactggacggcgtcatcgtcgccggcgccggagccggagccgacgccggcgggttgtcctcgatcactagtgacgtcgcattgccggctctgaggaaggcggagcggccgaacttggtgatccaggtggagttcacgacgccggagaagttgttatccgatatgtccaagaactctacgccgtcgagcggtggtaggtcgtcggggaacttcccggccatcgagttatgcgacatgtcgagccgccgaacccgcgtcagccgccgcaacccctccggcacggcggcgatcctgttcccggacacgtcgagaaccaccaggccggcggcgagcccgtcgacgccgacgacggaggtgaacccgttgcgggacgcgttgagcgacgccatccgcgcgctcgccccgagccgcagcgcgccgccgagccggttgcgcgacacgtcgacggcccggagcagcggcgcgcgccagagcgcgccgccgccgaagccgtcgtcgccctcgagggagttcccggagaggtcgacggtgagcagcccggacaggttccccagcgccgcccacccgacgacgccggcgaggttccgcgacgagtacgcgagcctccgcacgggccggcacgacggccgccgcggcagggggaagttggcgacgttcttgaacgcggcggtgacgatgccggcgtcagggagcggcacggtgcagttggaggtgctgtttcgcgcggccgcaggcgccgtcgccgcggacgccgaggtggcggcgacggcgacggcgaggaggaggatggcgtggagcatgggcggcatgggcgtaggcggaggaGgggggggggagggatgtgtgtgtggtggagcagtgggcggagac
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| CDS seq | atgccgcccatgctccacgccatcctcctcctcgccgtcgccgtcgccgccacctcggcgtccgcggcgacggcgcctgcggccgcgcgaaacagcacctccaactgcaccgtgccgctccctgacgccggcatcgtcaccgccgcgttcaagaacgtcgccaacttccccctgccgcggcggccgtcgtgccggcccgtgcggaggctcgcgtactcgtcgcggaacctcgccggcgtcgtcgggtgggcggcgctggggaacctgtccgggctgctcaccgtcgacctctccgggaactccctcgagggcgacgacggcttcggcggcggcgcgctctggcgcgcgccgctgctccgggccgtcgacgtgtcgcgcaaccggctcggcggcgcgctgcggctcggggcgagcgcgcggatggcgtcgctcaacgcgtcccgcaacgggttcacctccgtcgtcggcgtcgacgggctcgccgccggcctggtggttctcgacgtgtccgggaacaggatcgccgccgtgccggaggggttgcggcggctgacgcgggttcggcggctcgacatgtcgcataactcgatggccgggaagttccccgacgacctaccaccgctcgacggcgtagagttcttggacatatcggataacaacttctccggcgtcgtgaactccacctggatcaccaagttcggccgctccgccttcctcagagccggcaatgcgacgtcactagtgatcgaggacaacccgccggcgtcggctccggctccggcgccggcgacgatgacgccgtccagtggcgggaagaagcacaagcgtgtcgttctcatcgtcgtcgtcgtggtctgcggcgtggtggccgtgtccgccgcggtggcgttcatggcactggcagggtgcgtggcgtgtggcttcagccgccggaggaagagagggaagaaggcggcggcggcgtgggaggacgacgaggtcgccgtgggcgcggtgaaggtggtggccaccgcgccggtggtgctggtcgagcggccgctgatggagctgacgctggccgacctcgccgcggcgacgtcggggttcgggcgcgagtcgcagctcgccgacgtcggcggccgcagcggcgccgcgtaccgcgccgtgctcccgggggacctgcacgtcgtcgtgcgcgtcgtcgatggcgcggtggccggggtcggcggcgacgacggcgacgtcgcggcggcggctgccgggctccgggaacttgcaaggctcaggcacccaaacattcttccgctccttggctattgcattgcaggaaaggagaaactcctcctatacgagtacatagagaagggcaacctctaccggtggctccacgagctaccggcaagtagtatggacatggaagaaaccggtgctgatatgtgggacaccacggagcaggacaagaaatccatagatgattggcctacccggtaccacatcatactaggaatcgcacgagggctcgcgttcttgcaccagggatgggcaggatcatcgggacgtccaattgtgcacggcaatctggtcccaaccaacatcctcctcgacgatgacctagagcctaggatatcggactacatacaccccgtggatagtaacaatggagagctgaccccagagagtgacgtgtacagctttggcgtgctggtgttcgagcttgtgacaggacaggtgagatgggatgattcgacggtgagctgggcccgaggtgtgatccggaaccgaaagagcctcaacatcgtcgacgcgaggctaagagaggaagaggaggagggcggcaccagtggagcagcaaagacaacgatgacggtggcggagcgggagatggtggagtgcctgcaggtggggttcctctgcacggcgcactcgccggagaagaggccttcgatgcagcaggtagtgggggtgctcaaggacatcaggccggcgcctcctcctcccgcaggaggcgtcggcgagacgccatga
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| Protein seq | MPPMLHAILLLAVAVAATSASAATAPAAARNSTSNCTVPLPDAGIVTAAFKNVANFPLPRRPSCRPVRRLAYSSRNLAGVVGWAALGNLSGLLTVDLSGNSLEGDDGFGGGALWRAPLLRAVDVSRNRLGGALRLGASARMASLNASRNGFTSVVGVDGLAAGLVVLDVSGNRIAAVPEGLRRLTRVRRLDMSHNSMAGKFPDDLPPLDGVEFLDISDNNFSGVVNSTWITKFGRSAFLRAGNATSLVIEDNPPASAPAPAPATMTPSSGGKKHKRVVLIVVVVVCGVVAVSAAVAFMALAGCVACGFSRRRKRGKKAAAAWEDDEVAVGAVKVVATAPVVLVERPLMELTLADLAAATSGFGRESQLADVGGRSGAAYRAVLPGDLHVVVRVVDGAVAGVGGDDGDVAAAAAGLRELARLRHPNILPLLGYCIAGKEKLLLYEYIEKGNLYRWLHELPASSMDMEETGADMWDTTEQDKKSIDDWPTRYHIILGIARGLAFLHQGWAGSSGRPIVHGNLVPTNILLDDDLEPRISDYIHPVDSNNGELTPESDVYSFGVLVFELVTGQVRWDDSTVSWARGVIRNRKSLNIVDARLREEEEEGGTSGAAKTTMTVAEREMVECLQVGFLCTAHSPEKRPSMQQVVGVLKDIRPAPPPPAGGVGETP |
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| Function | Calmodulin-binding receptor kinase CaMRLK [UniProtKB/Swiss-Prot:Q9FK63] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_02g0010120 | OsNaBo_02g0010120.01 | Chr02 | 8113170 | 8116205 | - | NAM | ||
| CDS seq | atgccgcccatgctccacgccatcctcctcctcgccgtcgccgtcgccgccacctcggcgtccgcggcgacggcgcctgcggccgcgcgaaacagcacctccaactgcaccgtgccgctccctgacgccggcatcgtcaccgccgcgttcaagaacgtcgccaacttccccctgccgcggcggccgtcgtgccggcccgtgcggaggctcgcgtactcgtcgcggaacctcgccggcgtcgtcgggtgggcggcgctggggaacctgtccgggctgctcaccgtcgacctctccgggaactccctcgagggcgacgacggcttcggcggcggcgcgctctggcgcgcgccgctgctccgggccgtcgacgtgtcgcgcaaccggctcggcggcgcgctgcggctcggggcgagcgcgcggatggcgtcgctcaacgcgtcccgcaacgggttcacctccgtcgtcggcgtcgacgggctcgccgccggcctggtggttctcgacgtgtccgggaacaggatcgccgccgtgccggaggggttgcggcggctgacgcgggttcggcggctcgacatgtcgcataactcgatggccgggaagttccccgacgacctaccaccgctcgacggcgtagagttcttggacatatcggataacaacttctccggcgtcgtgaactccacctggatcaccaagttcggccgctccgccttcctcagagccggcaatgcgacgtcactagtgatcgaggacaacccgccggcgtcggctccggctccggcgccggcgacgatgacgccgtccagtggcgggaagaagcacaagcgtgtcgttctcatcgtcgtcgtcgtggtctgcggcgtggtggccgtgtccgccgcggtggcgttcatggcactggcagggtgcgtggcgtgtggcttcagccgccggaggaagagagggaagaaggcggcggcggcgtgggaggacgacgaggtcgccgtgggcgcggtgaaggtggtggccaccgcgccggtggtgctggtcgagcggccgctgatggagctgacgctggccgacctcgccgcggcgacgtcggggttcgggcgcgagtcgcagctcgccgacgtcggcggccgcagcggcgccgcgtaccgcgccgtgctcccgggggacctgcacgtcgtcgtgcgcgtcgtcgatggcgcggtggccggggtcggcggcgacgacggcgacgtcgcggcggcggctgccgggctccgggaacttgcaaggctcaggcacccaaacattcttccgctccttggctattgcattgcaggaaaggagaaactcctcctatacgagtacatagagaagggcaacctctaccggtggctccacgagctaccggcaagtagtatggacatggaagaaaccggtgctgatatgtgggacaccacggagcaggacaagaaatccatagatgattggcctacccggtaccacatcatactaggaatcgcacgagggctcgcgttcttgcaccagggatgggcaggatcatcgggacgtccaattgtgcacggcaatctggtcccaaccaacatcctcctcgacgatgacctagagcctaggatatcggactacatacaccccgtggatagtaacaatggagagctgaccccagagagtgacgtgtacagctttggcgtgctggtgttcgagcttgtgacaggacaggtgagatgggatgattcgacggtgagctgggcccgaggtgtgatccggaaccgaaagagcctcaacatcgtcgacgcgaggctaagagaggaagaggaggagggcggcaccagtggagcagcaaagacaacgatgacggtggcggagcgggagatggtggagtgcctgcaggtggggttcctctgcacggcgcactcgccggagaagaggccttcgatgcagcaggtagtgggggtgctcaaggacatcaggccggcgcctcctcctcccgcaggaggcgtcggcgagacgccatga
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| Protein seq | MPPMLHAILLLAVAVAATSASAATAPAAARNSTSNCTVPLPDAGIVTAAFKNVANFPLPRRPSCRPVRRLAYSSRNLAGVVGWAALGNLSGLLTVDLSGNSLEGDDGFGGGALWRAPLLRAVDVSRNRLGGALRLGASARMASLNASRNGFTSVVGVDGLAAGLVVLDVSGNRIAAVPEGLRRLTRVRRLDMSHNSMAGKFPDDLPPLDGVEFLDISDNNFSGVVNSTWITKFGRSAFLRAGNATSLVIEDNPPASAPAPAPATMTPSSGGKKHKRVVLIVVVVVCGVVAVSAAVAFMALAGCVACGFSRRRKRGKKAAAAWEDDEVAVGAVKVVATAPVVLVERPLMELTLADLAAATSGFGRESQLADVGGRSGAAYRAVLPGDLHVVVRVVDGAVAGVGGDDGDVAAAAAGLRELARLRHPNILPLLGYCIAGKEKLLLYEYIEKGNLYRWLHELPASSMDMEETGADMWDTTEQDKKSIDDWPTRYHIILGIARGLAFLHQGWAGSSGRPIVHGNLVPTNILLDDDLEPRISDYIHPVDSNNGELTPESDVYSFGVLVFELVTGQVRWDDSTVSWARGVIRNRKSLNIVDARLREEEEEGGTSGAAKTTMTVAEREMVECLQVGFLCTAHSPEKRPSMQQVVGVLKDIRPAPPPPAGGVGETP
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.743735 | 8.422027 | 1.592984 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0241100 | RBH | 0.720613 | 1.189095 | 0.930932 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g14480 | RBH | 0.487316 | 0.799765 | 0.239640 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0241100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0010290 | RBH | 0.614590 | 4.125825 | 3.149212 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0010360 | RBH | 0.301808 | 1.526140 | 1.005627 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0010240 | RBH | 0.830206 | 3.313615 | 0.986243 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0010040 | RBH | 0.405204 | 0.102856 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0010170 | RBH | 1.905879 | 8.047213 | 10.684000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0132400 | RBH | 6.1008245 | 16.755024 | 1.9481385 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0009930 | RBH | 0.348414 | 0.125261 | 0.419888 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0140100 | RBH | 7.1849375 | 9.7200815 | 0.650243 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0010470 | RBH | 0.096825 | 0.307102 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0010110 | RBH | 0.090566 | 3.000041 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0010400 | RBH | 0.0 | 11.133104 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0010420 | RBH | 0.710548 | 0.181636 | 0.269883 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0010100 | RBH | 0.093859 | 1.550520 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G010320 | RBH | 0.553846 | 1.041626 | 1.467802 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0018750 | RBH | 0.0 | 6.488292 | 0.0 |
