Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_02g0008690 | OGI:02018880 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr02:6418052-6424772 | ||||||||
| Gene Symbol | HDAC3, OsHDAC3, HDA703 | ||||||||||
| DNA seq | ctattcttgtgtctcttgttcttttgccatctgagtttctttcttctccatcattgttctctgatagaagtgttggtctgcaatatcgatcacattgtctggaagtgccatctttacataattatgaaggctgagagcttctttaaattcagtgccagttggtctttttccggtaaacatctccagcaacagtataccatagctgtagacatcacccagaattgaaacctcattgcccaaaccgtactctgtaatcataagaagatgttacataaaggaatttgttgcaagtttaagcatttatatttaaatttatttgtaggcttaagtctaataatatataatttacactgctgcataattatcatttgcaagaatttgagttttttcataacaaattgcacacatctgaatagcaaaacgatctacttaagtatggatcaatggaaaggtttctgaataaattagaaagaaaaccgtggattgtagctgttagaacttagaagcatacctggagcagcatatccatttctctcattgtagcccagccacttgatttctctaacatgtcactatggtcttgatgcaggactcttgcaagcccaaaatcaccaacgtaagcaaccatttcactatctaggaaaatattgcttggcttgagatcacagtgaataattggcaatggcctatgttggtgaagataatcaagtgctgaaaccacatcaatggcaatgtcgaacacatcctaaacattgataacaactacgctaattatggttccactgataagccggaaaaaatactactactagtaaatctgttatgaacacaacacaatgtagagaacacacaaggcacggggttttcgcctgaaattccatatctccatctaacagtctaacagactgtacattgtaacttgcttcacgttacatgttttgttttgtacattggtcagtcagactaatgcctccacgtccagtattgcctgaacattatggacttcttcaacaaaagaaacaatggtaaactcctacagaagaaacagtcatacaacacctcggggtaagtttgaaatgtcaagatgcagtatacagatcaactccagtttctgccaacttaagagcatgcaggaaaccttgacagagagctcgtgtcctgaaggtagctaaatcatggtcttctggtgcatagctgctggtgggttcggtcatttgggtgagcttcccggttcattcctggcgttgcctggcgcgttgacggccaccgcatttgcatccgcagtctatcgtcgacaagcaatgtgaagatgaaatccatataggcattaggaaacgcagagcttttgctatggatttgcagatggatagagaagacgacgacttacaggagcttgcttggaggaaccaagatcctctgccatcggttctggtcctttatgttcggttgttaatctcttaccatgctgcagaacgtgtaaatcagaaagtgttagttcaacaaaagatcacacaatgataccacaaagtccaagctgcatgcacaaccaaaaaaaatcctgtgagataaagaaaaggtacaaccaatgctgccttaaatttcattcagatgaaaaagtcaatacatctatgataagcaaaataatttcatcagcaccagtctttctccacaactcaacagcacaagagaatttcgctatatttctagcaccgatatggataaagattataattcacatatagcagcaagccagcaagaacagaactctacaatgaaaacctcattgttactccatccatttcatacttttacattataagtcgtttgacttttttctagttaaacttaattaagtttgaccaagtttttatagaaaatttagcaacatctaaaataccaaactagtttcattaaatataacattgaatacattttgataatatgtttgttttgtattgaaaatactaatatattttttctataaatttatacaaactcAaaaaaATTTTGACTAGAAAAAAAATCAAACGACTTATAATATGAAACGAAGGGAGTACATAAATAAGCACAAAAGGGGAATGCCACTTCTTTAAACAAAAGGGCGCATGTTAATAAAAGAATGGAGTAATTATACTGTTAGTTTTAATGATTCAGGCTCAGCTAGTTCTAAGGATTCAGGCTCAGCTAAAAAAGGAGACATCTCAAAATAAAATGGTGGACAGAAGCTCATTGGAATGAACTGAGAGGAGAAAGTACCTGATCTTTGGTCTCTGTTTCAGTAATTTCTCTCTTTACTCCGATGTTGTGAATAAGGCTTCTAAAATGAAAATATAACATGAGGCAGGGCACATAATTATACAAAATTTAATACAGCTTTTTTTAAAAAAAAAAAGGAAAAATAGATACCTTGCTGAGTGTCCCGTAGGTTTGTTATCATCCAACACCATATCAGAGTCAGGGTCGTGCCTTTCATCTGGATCCTCTTGATCTTCATCTGGCTGAATAATGAGCACATATTCACAGGACACGAATACATTCAGTCAGCCCTTGAGTTATCACTTCCAAGACATCATTTGCATGCTTGTATTAGGAAGCCTGGAGACTCACCTCAGGTAGCTTTGTTTCAGGAATTCGCTCTTCAAATTGGACGCTAGGAGCATGTTCAAGTTTTGAAAGATTGTCCAGAATATTGCATTTTATTTCCTCCAGTTGCTTGTTTGTATTTCTGTTCTCCATATTACTTGCTGCAACGTAAAGACTGTATTCTGGACCAAAATATTCATAGTACTCGTTGTAAGGCAACTTCTCCTGTAGCTCTTCACCAAGCGCAACTCCTGTCTGGCCGAATAAAAAACCAAATAAACAATGAAAGGACAAAACCATAGCTGTAGCAACAGACGTTCCTGATATAAGAGAAAAACAATTTACTCCAGCAAGCATAAGTGCAGCCATTCACACTTGTTCGCAATGTTTAGCCCGCTGTGTGTTCAGATTTATAAATTCACAAAAGGCAACGAAAACAGGCTTGCAAGGTCCAAAGAGACACCAGATTTTGGGTTGCTAATTttattaaagacatctctgaggaaagctaacaactgaggaacaggtggtggcctgaagcatatgattttgcaagggttaacagttagctagcattttccgggactcatcctaagtaatagagaTtttttactgtccagcaggcttgagcgataccaaatgctagccgtcggatggaccagatccaacggctgaaattgatcggtaccaccaggtaccgctttagtcacttaggtggtaccgcaccggtggaagggtaaggtggtcttttcgcatagaaaattttgggaagtcaattggagcggcgtctttcctccccagatggctagatgcgtgctgttgtcgccgccgttgtgtgaccttggtcgccgtcgccgccgtggtgtcgtccccatctgcagatgagacagaccaggacaagaacacctggggtcatcgtcaatggagcagcccagcactcactctctgggtgatatgacccaaagcgggaggtggagggccgtgcccatgttggcgatggcgaggtcaagctccgtcgaggtggtttccagcttgcagccttgcaccgcgaaggactcctccgcgacggccgccgtctcgtgccatcttccgaaacacagggattgcgcatagatttgcaaatggcagcataatcttcaggaataccatcttagtattgtacctttgtatatgtattttgtatatctgttaatctactaccattagtaagagactctgaatcaatcctcactgtgcattcgtcaaattgtcactgtgtgttctccgtccaggcggggtctggcttgtcccaccaccgcggctggacgacggaccggaagaagagaaccatctctagcgcccctgcatgtctagaagtagttgttgccgtacgcgacacagcacgccggcgtgctgcagcgcgtcaacgccggcgggaagcctgcgttggtacttgtgcaaccacgcagatggaactgatggctcagcactacgcacgccgcgaacaggccggcgaaacaggtgtgccgcgacggcatcgacgggagggaatgaatcggcggcggccgctcgtggaatattttgcggtgggcaggagaagcgttgggggggattgcggcgcctgtgagaggatgggtggcgtggagtccaggatgattcccatcgtgcccttgaatattggacggttagattcaacctggtaccactaggtactgaggtacaatttgctagaccagagcaaatctctaagtaataaggttaagtttgtctgtgaaagctctcttgtgccttgcctgatactatatctgttttaaaataaccaccctttaatgctttgagaaacacaggatgatttgttactgcacaagttctcacaaattaatgcatttgaatgaagcagagtagaaaataaatagattaagcattacatgtaaataggcaataggtgttctatgcatttcagtcatctgctcagcagaaaccaaaatcttagtttcgtgattgtaaaattacagcagcatggatcaataaacaaagccaggtagaaggtacagaccactatagaagacaagttcttgatgctgagcatcgaacacagttgaaacacaaagcaaattaggttctaacacattgccgagctcatggctttgctttgtcattcataatcaatagaattacttgtctgttaaaggcacaagggAaaaaaattgaggtaaagatagatatcagttttgtcttccgacgagattacatacctcgtaacaccagcagcgtgcaacatttcttatggtatatccaccaccaccaagaagaagcaacggaacattgaaagacctcatgaacttaacacattcagcatgacctttccctgagagattgaaacagcccaacctatcaccggacaacgaatcagcgccacactgaagcacaactgcaccaggacgatacatctccatgactttgccgatgatcggcttgaagatggactggtagctgtcatcatcaatcccatcatccagcgggacattcaggcaataatacttcccttctgaatacccaatatcgcggatgtcccctgttcccgggaaataatccccaaacttgtgaaatgagactgtcataaccctgtttgttgtgtagaacgcctcctcaactccatctccatgatggatatcaatatcaatatacagaactcgctgtaaatatgaagacagcatattagtggtttagcacaagaagacaactagaccaaataggggaaaaaacatctgatctgttttcaaactttcaactgttcatgataatctaggattgtctttacgcaacatgcattcttcagatctgtctaatcagtcacctcttgttctgaatacgtttcaatcaaatcaatctcttatcatgaatcgtccaatgaaaattctgtacgtcgtatatagctttaacagtatacatcatgggcaaatttaataacaaacacagcaagttcgtcgtcatatcattctctctctttggaacatcattatatcaactagaaatacatacacacattcagaatgattcatcaacgtacatcttttatccaggaaaacaaaaatctgaataaatttgttaatacataattctgcacgtgccaatatgccatactattcagacaatgtgtaatcgcgtaacgaatagtatatatgagatttaagttgagcaaaaagttagtccaatttctgtctacagatagccatttcatttacatttgctgatgattaatatttcctaccgatcaaaatttagcggaagatcgatcgaactgtacacgacaaaatcagagcaactgaagagaaagaagctagtcaagatgatttttacttccgtcttcattgacccaacttacacatcaagtaatctatctattcgaaaaattaaacgaaccacccatccaaatagtactactcctaatctattcgaaacattaaacgaaccAaaaaaaacacaaacaaacacaagaaaagcagaaaaaaaatggaaaaaaaaagaacacaagtacgagcggaataggatgacgtcacctcatggagcttgaggagctcgaggatggcgaggacgatgtcgttgacgtagcagaagccggaggcctcggacttcttggcgtggtgcaggccgccggaccagttgatggcgatgtcgtgggtgccgtggttgagcttgacggcggcgccgacggaggcgcccgcgtaggtctggcagtaggcgtagaggccgtcgaagacggggcagtccgggccgatgttgaagcggcggagggcgcggacctggccgagctgggtctccggggtgacggcgcggaggaaggcgacgtagtcgtcggagtggaagcggcagaggtcgatgccgcgggcggggagcgggcggagcacctgcatcttggccggggcgaggaggccgtagtgggcgagcagcgcgtgggtcatcctcacccggtggggcttcatcgggtgcccctgaccgtagtagtagttgcccacctccgggtcgtagaagtagcacacccgccgcttctgcgcgtcgccgcacgacgccgacgccagcgagttcccgccggcgcccgccgacgaggggtccatcgccgcctccgcctccgccgccgaattcggggtcgcgtgtgtgt
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| CDS seq | atggacccctcgtcggcgggcgccggcgggaactcgctggcgtcggcgtcgtgcggcgacgcgcagaagcggcgggtgtgctacttctacgacccggaggtgggcaactactactacggtcaggggcacccgatgaagccccaccgggtgaggatgacccacgcgctgctcgcccactacggcctcctcgccccggccaagatgcaggtgctccgcccgctccccgcccgcggcatcgacctctgccgcttccactccgacgactacgtcgccttcctccgcgccgtcaccccggagacccagctcggccaggtccgcgccctccgccgcttcaacatcggcccggactgccccgtcttcgacggcctctacgcctactgccagacctacgcgggcgcctccgtcggcgccgccgtcaagctcaaccacggcacccacgacatcgccatcaactggtccggcggcctgcaccacgccaagaagtccgaggcctccggcttctgctacgtcaacgacatcgtcctcgccatcctcgagctcctcaagctccatgagcgagttctgtatattgatattgatatccatcatggagatggagttgaggaggcgttctacacaacaaacagggttatgacagtctcatttcacaagtttggggattatttcccgggaacaggggacatccgcgatattgggtattcagaagggaagtattattgcctgaatgtcccgctggatgatgggattgatgatgacagctaccagtccatcttcaagccgatcatcggcaaagtcatggagatgtatcgtcctggtgcagttgtgcttcagtgtggcgctgattcgttgtccggtgataggttgggctgtttcaatctctcagggaaaggtcatgctgaatgtgttaagttcatgaggtctttcaatgttccgttgcttcttcttggtggtggtggatataccataagaaatgttgcacgctgctggtgttacgagACAGGAGTTGCGCTTGGTGAAGAGCTACAGGAGAAGTTGCCTTACAACGAGTACTATGAATATTTTGGTCCAGAATACAGTCTTTACGTTGCAGCAAGTAATATGGAGAACAGAAATACAAACAAGCAACTGGAGGAAATAAAATGCAATATTCTGGACAATCTTTCAAAACTTGAACATGCTCCTAGCGTCCAATTTGAAGAGCGAATTCCTGAAACAAAGCTACCTGAGCCAGATGAAGATCAAGAGGATCCAGATGAAAGGCACGACCCTGACTCTGATATGGTGTTGGATGATAACAAACCTACGGGACACTCAGCAAGAAGCCTTATTCACAACATCGGAGTAAAGAGAGAAATTACTGAAACAGAGACCAAAGATCAGcatggtaagagattaacaaccgaacataaaggaccagaaccgatggcagaggatcttggttcctccaagcaagctcctgatgtgttcgacattgccattgatgtggtttcagcacttgattatcttcaccaacataggccattgccaattattcactgtgatctcaagccaagcaatattttcctagatagtgaaatggttgcttacgttggtgattttgggcttgcaagagtcctgcatcaagaccatagtgacatgttagagaaatcaagtggctgggctacaatgagagaaatggatatgctgctccagtacggtttgggcaatgaggtttcaattctgggtgatgtctacagctatggtatactgttgctggagatgtttaccggaaaaagaccaactggcactgaatttaaagaagctctcagccttcataattatgtaaagatggcacttccagacaatgtgatcgatattgcagaccaacacttctatcagagaacaatgatggagaagaaagaaactcagatggcaaaagaacaagagacacaagaatag
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| Protein seq | MDPSSAGAGGNSLASASCGDAQKRRVCYFYDPEVGNYYYGQGHPMKPHRVRMTHALLAHYGLLAPAKMQVLRPLPARGIDLCRFHSDDYVAFLRAVTPETQLGQVRALRRFNIGPDCPVFDGLYAYCQTYAGASVGAAVKLNHGTHDIAINWSGGLHHAKKSEASGFCYVNDIVLAILELLKLHERVLYIDIDIHHGDGVEEAFYTTNRVMTVSFHKFGDYFPGTGDIRDIGYSEGKYYCLNVPLDDGIDDDSYQSIFKPIIGKVMEMYRPGAVVLQCGADSLSGDRLGCFNLSGKGHAECVKFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGEELQEKLPYNEYYEYFGPEYSLYVAASNMENRNTNKQLEEIKCNILDNLSKLEHAPSVQFEERIPETKLPEPDEDQEDPDERHDPDSDMVLDDNKPTGHSARSLIHNIGVKREITETETKDQHGKRLTTEHKGPEPMAEDLGSSKQAPDVFDIAIDVVSALDYLHQHRPLPIIHCDLKPSNIFLDSEMVAYVGDFGLARVLHQDHSDMLEKSSGWATMREMDMLLQYGLGNEVSILGDVYSYGILLLEMFTGKRPTGTEFKEALSLHNYVKMALPDNVIDIADQHFYQRTMMEKKETQMAKEQETQE |
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| Function | Histone deacetylase 3 [UniProtKB/Swiss-Prot:Q7Y0Y6] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_02g0008690 | OsNaBo_02g0008690.03 | Chr02 | 6419118 | 6424772 | - | NAM | ||
| CDS seq | atggacccctcgtcggcgggcgccggcgggaactcgctggcgtcggcgtcgtgcggcgacgcgcagaagcggcgggtgtgctacttctacgacccggaggtgggcaactactactacggtcaggggcacccgatgaagccccaccgggtgaggatgacccacgcgctgctcgcccactacggcctcctcgccccggccaagatgcaggtgctccgcccgctccccgcccgcggcatcgacctctgccgcttccactccgacgactacgtcgccttcctccgcgccgtcaccccggagacccagctcggccaggtccgcgccctccgccgcttcaacatcggcccggactgccccgtcttcgacggcctctacgcctactgccagacctacgcgggcgcctccgtcggcgccgccgtcaagctcaaccacggcacccacgacatcgccatcaactggtccggcggcctgcaccacgccaagaagtccgaggcctccggcttctgctacgtcaacgacatcgtcctcgccatcctcgagctcctcaagctccatgagcgagttctgtatattgatattgatatccatcatggagatggagttgaggaggcgttctacacaacaaacagggttatgacagtctcatttcacaagtttggggattatttcccgggaacaggggacatccgcgatattgggtattcagaagggaagtattattgcctgaatgtcccgctggatgatgggattgatgatgacagctaccagtccatcttcaagccgatcatcggcaaagtcatggagatgtatcgtcctggtgcagttgtgcttcagtgtggcgctgattcgttgtccggtgataggttgggctgtttcaatctctcagggaaaggtcatgctgaatgtgttaagttcatgaggtctttcaatgttccgttgcttcttcttggtggtggtggatataccataagaaatgttgcacgctgctggtgttacgagACAGGAGTTGCGCTTGGTGAAGAGCTACAGGAGAAGTTGCCTTACAACGAGTACTATGAATATTTTGGTCCAGAATACAGTCTTTACGTTGCAGCAAGTAATATGGAGAACAGAAATACAAACAAGCAACTGGAGGAAATAAAATGCAATATTCTGGACAATCTTTCAAAACTTGAACATGCTCCTAGCGTCCAATTTGAAGAGCGAATTCCTGAAACAAAGCTACCTGAGCCAGATGAAGATCAAGAGGATCCAGATGAAAGGCACGACCCTGACTCTGATATGGTGTTGGATGATAACAAACCTACGGGACACTCAGCAAGAAGCCTTATTCACAACATCGGAGTAAAGAGAGAAATTACTGAAACAGAGACCAAAGATCAGcatggtaagagattaacaaccgaacataaaggaccagaaccgatggcagaggatcttggttcctccaagcaagctcctactgcggatgcaaatgcggtggccgtcaacgcgccaggcaacgccaggaatgaaccgggaagctcacccaaatga
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| Protein seq | MDPSSAGAGGNSLASASCGDAQKRRVCYFYDPEVGNYYYGQGHPMKPHRVRMTHALLAHYGLLAPAKMQVLRPLPARGIDLCRFHSDDYVAFLRAVTPETQLGQVRALRRFNIGPDCPVFDGLYAYCQTYAGASVGAAVKLNHGTHDIAINWSGGLHHAKKSEASGFCYVNDIVLAILELLKLHERVLYIDIDIHHGDGVEEAFYTTNRVMTVSFHKFGDYFPGTGDIRDIGYSEGKYYCLNVPLDDGIDDDSYQSIFKPIIGKVMEMYRPGAVVLQCGADSLSGDRLGCFNLSGKGHAECVKFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGEELQEKLPYNEYYEYFGPEYSLYVAASNMENRNTNKQLEEIKCNILDNLSKLEHAPSVQFEERIPETKLPEPDEDQEDPDERHDPDSDMVLDDNKPTGHSARSLIHNIGVKREITETETKDQHGKRLTTEHKGPEPMAEDLGSSKQAPTADANAVAVNAPGNARNEPGSSPK
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_02g0008690 | OsNaBo_02g0008690.02 | Chr02 | 6418052 | 6424772 | - | NAM | ||
| CDS seq | atggaatttcaggcgaaaaccccgtgccttgatgtgttcgacattgccattgatgtggtttcagcacttgattatcttcaccaacataggccattgccaattattcactgtgatctcaagccaagcaatattttcctagatagtgaaatggttgcttacgttggtgattttgggcttgcaagagtcctgcatcaagaccatagtgacatgttagagaaatcaagtggctgggctacaatgagagaaatggatatgctgctccagtacggtttgggcaatgaggtttcaattctgggtgatgtctacagctatggtatactgttgctggagatgtttaccggaaaaagaccaactggcactgaatttaaagaagctctcagccttcataattatgtaaagatggcacttccagacaatgtgatcgatattgcagaccaacacttctatcagagaacaatgatggagaagaaagaaactcagatggcaaaagaacaagagacacaagaatag
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| Protein seq | MEFQAKTPCLDVFDIAIDVVSALDYLHQHRPLPIIHCDLKPSNIFLDSEMVAYVGDFGLARVLHQDHSDMLEKSSGWATMREMDMLLQYGLGNEVSILGDVYSYGILLLEMFTGKRPTGTEFKEALSLHNYVKMALPDNVIDIADQHFYQRTMMEKKETQMAKEQETQE |
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_02g0008690 | OsNaBo_02g0008690.01 | Chr02 | 6418052 | 6424772 | - | NAM | ||
| CDS seq | atggacccctcgtcggcgggcgccggcgggaactcgctggcgtcggcgtcgtgcggcgacgcgcagaagcggcgggtgtgctacttctacgacccggaggtgggcaactactactacggtcaggggcacccgatgaagccccaccgggtgaggatgacccacgcgctgctcgcccactacggcctcctcgccccggccaagatgcaggtgctccgcccgctccccgcccgcggcatcgacctctgccgcttccactccgacgactacgtcgccttcctccgcgccgtcaccccggagacccagctcggccaggtccgcgccctccgccgcttcaacatcggcccggactgccccgtcttcgacggcctctacgcctactgccagacctacgcgggcgcctccgtcggcgccgccgtcaagctcaaccacggcacccacgacatcgccatcaactggtccggcggcctgcaccacgccaagaagtccgaggcctccggcttctgctacgtcaacgacatcgtcctcgccatcctcgagctcctcaagctccatgagcgagttctgtatattgatattgatatccatcatggagatggagttgaggaggcgttctacacaacaaacagggttatgacagtctcatttcacaagtttggggattatttcccgggaacaggggacatccgcgatattgggtattcagaagggaagtattattgcctgaatgtcccgctggatgatgggattgatgatgacagctaccagtccatcttcaagccgatcatcggcaaagtcatggagatgtatcgtcctggtgcagttgtgcttcagtgtggcgctgattcgttgtccggtgataggttgggctgtttcaatctctcagggaaaggtcatgctgaatgtgttaagttcatgaggtctttcaatgttccgttgcttcttcttggtggtggtggatataccataagaaatgttgcacgctgctggtgttacgagACAGGAGTTGCGCTTGGTGAAGAGCTACAGGAGAAGTTGCCTTACAACGAGTACTATGAATATTTTGGTCCAGAATACAGTCTTTACGTTGCAGCAAGTAATATGGAGAACAGAAATACAAACAAGCAACTGGAGGAAATAAAATGCAATATTCTGGACAATCTTTCAAAACTTGAACATGCTCCTAGCGTCCAATTTGAAGAGCGAATTCCTGAAACAAAGCTACCTGAGCCAGATGAAGATCAAGAGGATCCAGATGAAAGGCACGACCCTGACTCTGATATGGTGTTGGATGATAACAAACCTACGGGACACTCAGCAAGAAGCCTTATTCACAACATCGGAGTAAAGAGAGAAATTACTGAAACAGAGACCAAAGATCAGcatggtaagagattaacaaccgaacataaaggaccagaaccgatggcagaggatcttggttcctccaagcaagctcctgatgtgttcgacattgccattgatgtggtttcagcacttgattatcttcaccaacataggccattgccaattattcactgtgatctcaagccaagcaatattttcctagatagtgaaatggttgcttacgttggtgattttgggcttgcaagagtcctgcatcaagaccatagtgacatgttagagaaatcaagtggctgggctacaatgagagaaatggatatgctgctccagtacggtttgggcaatgaggtttcaattctgggtgatgtctacagctatggtatactgttgctggagatgtttaccggaaaaagaccaactggcactgaatttaaagaagctctcagccttcataattatgtaaagatggcacttccagacaatgtgatcgatattgcagaccaacacttctatcagagaacaatgatggagaagaaagaaactcagatggcaaaagaacaagagacacaagaatag
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| Protein seq | MDPSSAGAGGNSLASASCGDAQKRRVCYFYDPEVGNYYYGQGHPMKPHRVRMTHALLAHYGLLAPAKMQVLRPLPARGIDLCRFHSDDYVAFLRAVTPETQLGQVRALRRFNIGPDCPVFDGLYAYCQTYAGASVGAAVKLNHGTHDIAINWSGGLHHAKKSEASGFCYVNDIVLAILELLKLHERVLYIDIDIHHGDGVEEAFYTTNRVMTVSFHKFGDYFPGTGDIRDIGYSEGKYYCLNVPLDDGIDDDSYQSIFKPIIGKVMEMYRPGAVVLQCGADSLSGDRLGCFNLSGKGHAECVKFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGEELQEKLPYNEYYEYFGPEYSLYVAASNMENRNTNKQLEEIKCNILDNLSKLEHAPSVQFEERIPETKLPEPDEDQEDPDERHDPDSDMVLDDNKPTGHSARSLIHNIGVKREITETETKDQHGKRLTTEHKGPEPMAEDLGSSKQAPDVFDIAIDVVSALDYLHQHRPLPIIHCDLKPSNIFLDSEMVAYVGDFGLARVLHQDHSDMLEKSSGWATMREMDMLLQYGLGNEVSILGDVYSYGILLLEMFTGKRPTGTEFKEALSLHNYVKMALPDNVIDIADQHFYQRTMMEKKETQMAKEQETQE
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0214900 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g12350 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0214900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0008780 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0008870 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0008650 | RBH | 0.0 | 0.000000 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0008530 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0008660 | RBH | 0.0 | 0.000000 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0107800 | RBH | 0 | 0.050365 | 0.0090035 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0008490 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0111900 | RBH | 0.0342615 | 0.1380205 | 0.152537 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0008920 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0008590 | RBH | 0.0 | 1.299927 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0008900 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0008870 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0008640 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G008770 | RBH | 0.0 | 0.0 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0020600 | SBH | 4.274674 | 61.582783 | 25.070045 |
