Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_02g0008200 | OGI:02017650 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr02:5898770-5900298 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | tcaaatatgcctatttgcactgcacTctactgttatagaacttgagTtttttggtttctgcaGggtgaagctgcgtatcagctgcgtcaggctttcatacgaggagccccCTTtctccatggctctgtgagctttctccccgtactcctttgccttCctcctcctcTcgccggcctcctcgccgccgtccatgagctttgacaccgcccgcgcgacgtctgctcgccccAcctgcatggcggcctcgtcgccgaacagcaacacggacgccgttgcgccgaccggcacgccgacgccgagcacgttgacggcgagccgctcgttaaggaactgatcggtgaagtgcggccacgtcaagaccggcacgccatgggcgatggaCTccagaatcgagttccagccgcagtGggtgacaaagccaccgacggcgcggtgcgacaggatggcgagctgcggcgcccacccgcggaccacgacgccgcgccccgccacgcgcgcctccagcgcggacaaccattcttgcacctccggcatggccacctccgactccttcaccacccagatgaacggcttgccggagtcctcgaggccatggccgacctcgaacaagtacttggggaccttgcgagcgaggctgccaaagttgacgtagatgacggagtcggtgtccatggcgtcgagccacgtggtgaccacgctctgggcgacgtcgggcgtgtttccgcgcgacgccatggcgtcggcgtcccggttgtagaggcagaacggccccagcgtccacaccggcttggcgagcgccgcctcgaagcacgcgatgaactcgttctcgaggtccaggaacgtgttcaccaccccgccgtcggccgtgcgcatggcctccatggccgcgtcccgtaggtcctcccaccctggtgtgttgaagaaccctggctgcgtgtccttggtcacctccacgcgcaccggcatgcccggcacgacgtacctgtcgtcgtcgccctgctgctgcagcccgtgcgcggcggcgttgaggtcgcagaGggGAGTAGAAGCACGACGGGCCATGGAAGAACAGCCGCGGCACGCCGGCGCGGCGCGCCACGCCGGCCGTCCACGAGTTGGACCAGTCAGAGATGATGCAGCTGGGCGGCGCCGGCAGCGCGCGCAGGTACGCCTCGAGCGGCGCGGCGAGCTCGCGCATGACGTCGAAGAACGGACGGAAGTGGGCGTAGTCAGTGATCTGGTCGACGTTCTCGACGCCCGGCGGCAGGCCGGCGTCGGCGGCCGACGGCGGGAACGGGACCTCCACTATCTCGAGCGGCAGCTCGGCGCGCGCGGCGTGGTCGGCGGCGCCGCGCAGGCGCGCGGCGTTCACGGGCGTGACGACGAGGCTGGCGCGGACGCCGCGCTCCcgcgaggaggcgcgcgaggtcgaccatggggatggtgtggccctgcgccggaaaggggacgatgacgaagtgcggcggcggcggtgacgtagcagtatcgagctcagccgtgggcgccat
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| CDS seq | atggcgcccacggctgagctcgatactgctacgtcaccgccgccgccgcacttcgtcatcgtcccctttccggcgcagggccacaccatccccatgCGCGGCGTCCGCGCCAGCCTCGTCGTCACGCCCGTGAACGCCGCGCGCCTGCGCGGCGCCGCCGACCACGCCGCGCGCGCCGAGCTGCCGCTCGAGATAGTGGAGGTCCCGTTCCCGCCGTCGGCCGCCGACGCCGGCCTGCCGCCGGGCGTCGAGAACGTCGACCAGATCACTGACTACGCCCACTTCCGTCCGTTCTTCGACGTCATGCGCGAGCTCGCCGCGCCGCTCGAGGCGTACCTGCGCGCGCTGCCGGCGCCGCCCAGCTGCATCATCTCTGACTGGTCCAACTCGTGGACGGCCGGCGTGGCGCGCCGCGCCGGCGTGCCGCGGCTGTTCTTCCATGGCCCGTCGTGCTTCTACTCccCtctgcgacctcaacgccgccgcgcacgggctgcagcagcagggcgacgacgacaggtgaccaaggacacgcagccagggttcttcaacacaccagggtgggaggacctacgggacgcggccatggaggccatgcgcacggccgacggcggggtggtgaacacgttcctggacctcgagaacgagttcatcgcgtgcttcgaggcggcgctcgccaagccggtgtggacgctggggccgttctgcctctacaaccgggacgccgacgccatggcgtcgcgcggaaacacgcccgacgtcgcccagagcgtggtcaccacgtggctcgacgccatggacaccgactccgtcatctacgtcaactttggcagcctcgctcgcaaggtccccaagtacttgttcgaggtcggccatggcctcgaggactccggcaagccgttcatctgggtggtgaaggagtcggaggtggccatgccggaggtgcaagaatggttgtccgcgctggaggcgcgcgtggcggggcgcggcgtcgtggtccgcgggtgggcgccgcagctcgccatcctgtcgcaccgcgccgtcggtggctttgtcaccCactgcggctggaactcgattctggAGtccatcgcccatggcgtgccggtcttgacgtggccgcacttcaccgatcagttccttaacgagcggctcgccgtcaacgtgctcggcgtcggcgtgccggtcggcgcaacggcgtccgtgttgctgttcggcgacgaggccgccatgcaggTggggcgagcagacgtcgcgcgggcggtgtcaaagctcatggacggcggcgaggaggccggcgAgaggaggagGaaggcaaaggagtacggggagaaagctcacagagccatggagaAAGggggctcctcgtatgaaagcctgacgcagctgatacgcagcttcaccCtgcagaaaccaaaaaActcaagttctataacagtagAgtgcagtgcaaataggcatatttga
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| Protein seq | MAPTAELDTATSPPPPHFVIVPFPAQGHTIPMRGVRASLVVTPVNAARLRGAADHAARAELPLEIVEVPFPPSAADAGLPPGVENVDQITDYAHFRPFFDVMRELAAPLEAYLRALPAPPSCIISDWSNSWTAGVARRAGVPRLFFHGPSCFYSPLRPQRRRARAAAAGRRRQVTKDTQPGFFNTPGWEDLRDAAMEAMRTADGGVVNTFLDLENEFIACFEAALAKPVWTLGPFCLYNRDADAMASRGNTPDVAQSVVTTWLDAMDTDSVIYVNFGSLARKVPKYLFEVGHGLEDSGKPFIWVVKESEVAMPEVQEWLSALEARVAGRGVVVRGWAPQLAILSHRAVGGFVTHCGWNSILESIAHGVPVLTWPHFTDQFLNERLAVNVLGVGVPVGATASVLLFGDEAAMQVGRADVARAVSKLMDGGEEAGERRRKAKEYGEKAHRAMEKGGSSYESLTQLIRSFTLQKPKNSSSITVECSANRHI |
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| Function | UDP-glycosyltransferase 73C1 [UniProtKB/Swiss-Prot:Q9ZQ99] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_02g0008200 | OsNaBo_02g0008200.01 | Chr02 | 5898770 | 5900298 | - | NAM | ||
| CDS seq | atggcgcccacggctgagctcgatactgctacgtcaccgccgccgccgcacttcgtcatcgtcccctttccggcgcagggccacaccatccccatgCGCGGCGTCCGCGCCAGCCTCGTCGTCACGCCCGTGAACGCCGCGCGCCTGCGCGGCGCCGCCGACCACGCCGCGCGCGCCGAGCTGCCGCTCGAGATAGTGGAGGTCCCGTTCCCGCCGTCGGCCGCCGACGCCGGCCTGCCGCCGGGCGTCGAGAACGTCGACCAGATCACTGACTACGCCCACTTCCGTCCGTTCTTCGACGTCATGCGCGAGCTCGCCGCGCCGCTCGAGGCGTACCTGCGCGCGCTGCCGGCGCCGCCCAGCTGCATCATCTCTGACTGGTCCAACTCGTGGACGGCCGGCGTGGCGCGCCGCGCCGGCGTGCCGCGGCTGTTCTTCCATGGCCCGTCGTGCTTCTACTCccCtctgcgacctcaacgccgccgcgcacgggctgcagcagcagggcgacgacgacaggtgaccaaggacacgcagccagggttcttcaacacaccagggtgggaggacctacgggacgcggccatggaggccatgcgcacggccgacggcggggtggtgaacacgttcctggacctcgagaacgagttcatcgcgtgcttcgaggcggcgctcgccaagccggtgtggacgctggggccgttctgcctctacaaccgggacgccgacgccatggcgtcgcgcggaaacacgcccgacgtcgcccagagcgtggtcaccacgtggctcgacgccatggacaccgactccgtcatctacgtcaactttggcagcctcgctcgcaaggtccccaagtacttgttcgaggtcggccatggcctcgaggactccggcaagccgttcatctgggtggtgaaggagtcggaggtggccatgccggaggtgcaagaatggttgtccgcgctggaggcgcgcgtggcggggcgcggcgtcgtggtccgcgggtgggcgccgcagctcgccatcctgtcgcaccgcgccgtcggtggctttgtcaccCactgcggctggaactcgattctggAGtccatcgcccatggcgtgccggtcttgacgtggccgcacttcaccgatcagttccttaacgagcggctcgccgtcaacgtgctcggcgtcggcgtgccggtcggcgcaacggcgtccgtgttgctgttcggcgacgaggccgccatgcaggTggggcgagcagacgtcgcgcgggcggtgtcaaagctcatggacggcggcgaggaggccggcgAgaggaggagGaaggcaaaggagtacggggagaaagctcacagagccatggagaAAGggggctcctcgtatgaaagcctgacgcagctgatacgcagcttcaccCtgcagaaaccaaaaaActcaagttctataacagtagAgtgcagtgcaaataggcatatttga
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| Protein seq | MAPTAELDTATSPPPPHFVIVPFPAQGHTIPMRGVRASLVVTPVNAARLRGAADHAARAELPLEIVEVPFPPSAADAGLPPGVENVDQITDYAHFRPFFDVMRELAAPLEAYLRALPAPPSCIISDWSNSWTAGVARRAGVPRLFFHGPSCFYSPLRPQRRRARAAAAGRRRQVTKDTQPGFFNTPGWEDLRDAAMEAMRTADGGVVNTFLDLENEFIACFEAALAKPVWTLGPFCLYNRDADAMASRGNTPDVAQSVVTTWLDAMDTDSVIYVNFGSLARKVPKYLFEVGHGLEDSGKPFIWVVKESEVAMPEVQEWLSALEARVAGRGVVVRGWAPQLAILSHRAVGGFVTHCGWNSILESIAHGVPVLTWPHFTDQFLNERLAVNVLGVGVPVGATASVLLFGDEAAMQVGRADVARAVSKLMDGGEEAGERRRKAKEYGEKAHRAMEKGGSSYESLTQLIRSFTLQKPKNSSSITVECSANRHI
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0207400 | RBH | 0.0 | 0.0 | 0.092946 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g11700 | RBH | 0.0 | 0.0 | 0.022576 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0207400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0008170 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0008280 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0008070 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0008020 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0008090 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0100800 | SBH | 4.843346 | 0 | 0.2125995 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0008020 | RBH | 0.0 | 0.0 | 0.040355 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0104300 | RBH | 7.042628 | 0.0053025 | 0.0120415 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0008440 | RBH | 0.013563 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0008060 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0008340 | RBH | 0.771361 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0008340 | RBH | 0.060356 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0008090 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G008200 | RBH | 0.0 | 0.0 | 0.232379 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0021150 | SBH | 0.303831 | 0.0 | 1.510420 |
