Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_01g0046510 | OGI:01123610 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr01:42547540-42550332 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | atggaagAaaatattggaaagctggacaacactatcAaaaacctagaagttaggaaaaatgaaatccaaatccggcttagtatctctgaggggaagcaagaaacatgtaatcctgaagttacagaatggctacaaaaggtagcagcgatggaaactgaggtgaatgagatAaaaaatgtgcagaggaagagaaagcaattattcagttattggtcaaagtacgaaattggcatgcaggcTgcgaagaaactgaaggaagctgaaatgttgcatgaaaaaggtgcattcaaagaggtatcatttgaggtaccaccatatttcgtgcaagaagtgcccaccataccttcaactgaagAaacagagtgtaatttgaaagaagttctgcagtacctcaaagatgacaatgttggaattttagggatatggggaatgggaggagttggtaagaccaccttgctcagaaaaatcaacaatcacttcttaggtgtaaccaaagaaaattatggattcgaccttgttgtttatgtcgtggcatctacagccagtggaataggtcagcttcaagcagatattgctgaaaggatcgggctgttcctgaaaccaggttgtagcattaatatacgggcttcatttttgttaagttttttaaggagaaagaaattcttacttctgatagatgatttatggggttatttggatttagctgaagctggcattccatatcctaatggcctaaataagcagaaagtagttctggcaacacgttctgagagtgtttgtgggcatatgggagctcacaagacgatcttcatggaatgcttggaccaagAAaaagcttggcgattattcaaagaaaaagcaacagaagaagttattagttcagatgttaggattgaaagcctagcaaaGgaagttgcagaagaatgtGggggtttgccccttgctcttgcaactcttggtcgtgcaatgtccacaaagaggactcgtcatgaatgggcacttgcactgtcatatctgaagaagtcccgcattcatgagatcccaaatatgggaaatactagtcacatatacactaggctaaaattaagttatgattatctgcaggataaacagatcaaatattgtttcttatgctgttctctgtggcctgaaggctactcaatttggaaagttgcactgatagactgttggatggggatgggtttgatagagtatgatactatagaggaagcatatgacaagggccactccatcattgagtacttgAaaaatgcttgcttattggaggctggctacttggaagatagggaggtgagaatacatgacattatccgagatatggcactgtcaatatcttctggctgtgttgaccaaagcatgaattggattgttcaggcaggggttggaattcataaaattgatagcagggatattgagaaatggaggtcagccagaaagatatcgctcatgtgcaattatatcagtgaacttcctcatgctatcagctgttacaatctccaatatctgtcactgcagcaaaacttttggttgaatgtgatcccaccttctctttttaaatgcttatcgtctgttacatacttggacttgtcttggattcccatcaaagaacttccagaagaaatcggcgcattagttgaactccaatgtctcaaactgaaccaaacactcattaaatcattgcctgtggcgattggccaattaacaaagttgaagtacctaaatttgagctacatggatttcttggagaagataccctatggtgttattccaaatttatcaaagctacaagtgttggacttatatggtagcaggtatgctggctgtgaagaggggtttcattcaagaagtcacatggattATGatgagtttagaatagaagagttatcttgcttaactagagaactaaaagctctgggaataacaatcaagaaagtgagtaccttgaagaagctccttgatattcatggaagtcacatgagattgcttggtctatataaattgagtggcgagacatctcttgcgctcactataccagatagtgtccttgttcttaatataacggactgttcagaattaaaggagttctctgtcacaaacaagccacagtgttatggagatcatcttccgaggctagagtttctcaccttttgggatcttccaagAattgagaagattagtatggggcatattcagaaccttcgtgtcctttatgtagggaaagcccatcaactgatggacatgtcctgcattctgaaactaccgcacctggagcaattggatgtgtctttctgcaataaaatgaaacagctagtccatataaagaatAaaatcaatactgaagtacaagatgaaatgccaatccagggatttcgacgactgagaattttgcaattgaattcgttgccaagcttggaaaacttctgtaactttagcctagaccttccttctttggaatactttgaTGtgtttgcttgtccgaagctgagaaggctgccttttgggcatgcaattgtcaaattaaagagtgtcatgggggagaaaacatggtgggacaatcttaaatgggatgatgaaaacagtcccttattgctatttccattttttaaagcatcagaaactcgtatagcatccttaaggccggagctagatactagtgtagcatcctcacccaaagctttcttcaccaaaaggcagccctatttaagttcatcaattcgctacacatctttcctaaaatctatgtttgaagctgaggagtttagtagcctttag
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| CDS seq | atggaagAaaatattggaaagctggacaacactatcAaaaacctagaagttaggaaaaatgaaatccaaatccggcttagtatctctgaggggaagcaagaaacatgtaatcctgaagttacagaatggctacaaaaggtagcagcgatggaaactgaggtgaatgagatAaaaaatgtgcagaggaagagaaagcaattattcagttattggtcaaagtacgaaattggcatgcaggcTgcgaagaaactgaaggaagctgaaatgttgcatgaaaaaggtgcattcaaagaggtatcatttgaggtaccaccatatttcgtgcaagaagtgcccaccataccttcaactgaagAaacagagtgtaatttgaaagaagttctgcagtacctcaaagatgacaatgttggaattttagggatatggggaatgggaggagttggtaagaccaccttgctcagaaaaatcaacaatcacttcttaggtgtaaccaaagaaaattatggattcgaccttgttgtttatgtcgtggcatctacagccagtggaataggtcagcttcaagcagatattgctgaaaggatcgggctgttcctgaaaccaggttgtagcattaatatacgggcttcatttttgttaagttttttaaggagaaagaaattcttacttctgatagatgatttatggggttatttggatttagctgaagctggcattccatatcctaatggcctaaataagcagaaagtagttctggcaacacgttctgagagtgtttgtgggcatatgggagctcacaagacgatcttcatggaatgcttggaccaagAAaaagcttggcgattattcaaagaaaaagcaacagaagaagttattagttcagatgttaggattgaaagcctagcaaaGgaagttgcagaagaatgtGggggtttgccccttgctcttgcaactcttggtcgtgcaatgtccacaaagaggactcgtcatgaatgggcacttgcactgtcatatctgaagaagtcccgcattcatgagatcccaaatatgggaaatactagtcacatatacactaggctaaaattaagttatgattatctgcaggataaacagatcaaatattgtttcttatgctgttctctgtggcctgaaggctactcaatttggaaagttgcactgatagactgttggatggggatgggtttgatagagtatgatactatagaggaagcatatgacaagggccactccatcattgagtacttgAaaaatgcttgcttattggaggctggctacttggaagatagggaggtgagaatacatgacattatccgagatatggcactgtcaatatcttctggctgtgttgaccaaagcatgaattggattgttcaggcaggggttggaattcataaaattgatagcagggatattgagaaatggaggtcagccagaaagatatcgctcatgtgcaattatatcagtgaacttcctcatgctatcagctgttacaatctccaatatctgtcactgcagcaaaacttttggttgaatgtgatcccaccttctctttttaaatgcttatcgtctgttacatacttggacttgtcttggattcccatcaaagaacttccagaagaaatcggcgcattagttgaactccaatgtctcaaactgaaccaaacactcattaaatcattgcctgtggcgattggccaattaacaaagttgaagtacctaaatttgagctacatggatttcttggagaagataccctatggtgttattccaaatttatcaaagctacaagtgttggacttatatggtagcaggtatgctggctgtgaagaggggtttcattcaagaagtcacatggattATGatgagtttagaatagaagagttatcttgcttaactagagaactaaaagctctgggaataacaatcaagaaagtgagtaccttgaagaagctccttgatattcatggaagtcacatgagattgcttggtctatataaattgagtggcgagacatctcttgcgctcactataccagatagtgtccttgttcttaatataacggactgttcagaattaaaggagttctctgtcacaaacaagccacagtgttatggagatcatcttccgaggctagagtttctcaccttttgggatcttccaagAattgagaagattagtatggggcatattcagaaccttcgtgtcctttatgtagggaaagcccatcaactgatggacatgtcctgcattctgaaactaccgcacctggagcaattggatgtgtctttctgcaataaaatgaaacagctagtccatataaagaatAaaatcaatactgaagtacaagatgaaatgccaatccagggatttcgacgactgagaattttgcaattgaattcgttgccaagcttggaaaacttctgtaactttagcctagaccttccttctttggaatactttgaTGtgtttgcttgtccgaagctgagaaggctgccttttgggcatgcaattgtcaaattaaagagtgtcatgggggagaaaacatggtgggacaatcttaaatgggatgatgaaaacagtcccttattgctatttccattttttaaagcatcagaaactcgtatagcatccttaaggccggagctagatactagtgtagcatcctcacccaaagctttcttcaccaaaaggcagccctatttaagttcatcaattcgctacacatctttcctaaaatctatgtttgaagctgaggagtttagtagcctttag
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| Protein seq | MEENIGKLDNTIKNLEVRKNEIQIRLSISEGKQETCNPEVTEWLQKVAAMETEVNEIKNVQRKRKQLFSYWSKYEIGMQAAKKLKEAEMLHEKGAFKEVSFEVPPYFVQEVPTIPSTEETECNLKEVLQYLKDDNVGILGIWGMGGVGKTTLLRKINNHFLGVTKENYGFDLVVYVVASTASGIGQLQADIAERIGLFLKPGCSINIRASFLLSFLRRKKFLLLIDDLWGYLDLAEAGIPYPNGLNKQKVVLATRSESVCGHMGAHKTIFMECLDQEKAWRLFKEKATEEVISSDVRIESLAKEVAEECGGLPLALATLGRAMSTKRTRHEWALALSYLKKSRIHEIPNMGNTSHIYTRLKLSYDYLQDKQIKYCFLCCSLWPEGYSIWKVALIDCWMGMGLIEYDTIEEAYDKGHSIIEYLKNACLLEAGYLEDREVRIHDIIRDMALSISSGCVDQSMNWIVQAGVGIHKIDSRDIEKWRSARKISLMCNYISELPHAISCYNLQYLSLQQNFWLNVIPPSLFKCLSSVTYLDLSWIPIKELPEEIGALVELQCLKLNQTLIKSLPVAIGQLTKLKYLNLSYMDFLEKIPYGVIPNLSKLQVLDLYGSRYAGCEEGFHSRSHMDYDEFRIEELSCLTRELKALGITIKKVSTLKKLLDIHGSHMRLLGLYKLSGETSLALTIPDSVLVLNITDCSELKEFSVTNKPQCYGDHLPRLEFLTFWDLPRIEKISMGHIQNLRVLYVGKAHQLMDMSCILKLPHLEQLDVSFCNKMKQLVHIKNKINTEVQDEMPIQGFRRLRILQLNSLPSLENFCNFSLDLPSLEYFDVFACPKLRRLPFGHAIVKLKSVMGEKTWWDNLKWDDENSPLLLFPFFKASETRIASLRPELDTSVASSPKAFFTKRQPYLSSSIRYTSFLKSMFEAEEFSSL |
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| Function | Disease resistance protein RPS5 [UniProtKB/Swiss-Prot:O64973] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_01g0046510 | OsNaBo_01g0046510.01 | Chr01 | 42547540 | 42550332 | + | NAM | ||
| CDS seq | atggaagAaaatattggaaagctggacaacactatcAaaaacctagaagttaggaaaaatgaaatccaaatccggcttagtatctctgaggggaagcaagaaacatgtaatcctgaagttacagaatggctacaaaaggtagcagcgatggaaactgaggtgaatgagatAaaaaatgtgcagaggaagagaaagcaattattcagttattggtcaaagtacgaaattggcatgcaggcTgcgaagaaactgaaggaagctgaaatgttgcatgaaaaaggtgcattcaaagaggtatcatttgaggtaccaccatatttcgtgcaagaagtgcccaccataccttcaactgaagAaacagagtgtaatttgaaagaagttctgcagtacctcaaagatgacaatgttggaattttagggatatggggaatgggaggagttggtaagaccaccttgctcagaaaaatcaacaatcacttcttaggtgtaaccaaagaaaattatggattcgaccttgttgtttatgtcgtggcatctacagccagtggaataggtcagcttcaagcagatattgctgaaaggatcgggctgttcctgaaaccaggttgtagcattaatatacgggcttcatttttgttaagttttttaaggagaaagaaattcttacttctgatagatgatttatggggttatttggatttagctgaagctggcattccatatcctaatggcctaaataagcagaaagtagttctggcaacacgttctgagagtgtttgtgggcatatgggagctcacaagacgatcttcatggaatgcttggaccaagAAaaagcttggcgattattcaaagaaaaagcaacagaagaagttattagttcagatgttaggattgaaagcctagcaaaGgaagttgcagaagaatgtGggggtttgccccttgctcttgcaactcttggtcgtgcaatgtccacaaagaggactcgtcatgaatgggcacttgcactgtcatatctgaagaagtcccgcattcatgagatcccaaatatgggaaatactagtcacatatacactaggctaaaattaagttatgattatctgcaggataaacagatcaaatattgtttcttatgctgttctctgtggcctgaaggctactcaatttggaaagttgcactgatagactgttggatggggatgggtttgatagagtatgatactatagaggaagcatatgacaagggccactccatcattgagtacttgAaaaatgcttgcttattggaggctggctacttggaagatagggaggtgagaatacatgacattatccgagatatggcactgtcaatatcttctggctgtgttgaccaaagcatgaattggattgttcaggcaggggttggaattcataaaattgatagcagggatattgagaaatggaggtcagccagaaagatatcgctcatgtgcaattatatcagtgaacttcctcatgctatcagctgttacaatctccaatatctgtcactgcagcaaaacttttggttgaatgtgatcccaccttctctttttaaatgcttatcgtctgttacatacttggacttgtcttggattcccatcaaagaacttccagaagaaatcggcgcattagttgaactccaatgtctcaaactgaaccaaacactcattaaatcattgcctgtggcgattggccaattaacaaagttgaagtacctaaatttgagctacatggatttcttggagaagataccctatggtgttattccaaatttatcaaagctacaagtgttggacttatatggtagcaggtatgctggctgtgaagaggggtttcattcaagaagtcacatggattATGatgagtttagaatagaagagttatcttgcttaactagagaactaaaagctctgggaataacaatcaagaaagtgagtaccttgaagaagctccttgatattcatggaagtcacatgagattgcttggtctatataaattgagtggcgagacatctcttgcgctcactataccagatagtgtccttgttcttaatataacggactgttcagaattaaaggagttctctgtcacaaacaagccacagtgttatggagatcatcttccgaggctagagtttctcaccttttgggatcttccaagAattgagaagattagtatggggcatattcagaaccttcgtgtcctttatgtagggaaagcccatcaactgatggacatgtcctgcattctgaaactaccgcacctggagcaattggatgtgtctttctgcaataaaatgaaacagctagtccatataaagaatAaaatcaatactgaagtacaagatgaaatgccaatccagggatttcgacgactgagaattttgcaattgaattcgttgccaagcttggaaaacttctgtaactttagcctagaccttccttctttggaatactttgaTGtgtttgcttgtccgaagctgagaaggctgccttttgggcatgcaattgtcaaattaaagagtgtcatgggggagaaaacatggtgggacaatcttaaatgggatgatgaaaacagtcccttattgctatttccattttttaaagcatcagaaactcgtatagcatccttaaggccggagctagatactagtgtagcatcctcacccaaagctttcttcaccaaaaggcagccctatttaagttcatcaattcgctacacatctttcctaaaatctatgtttgaagctgaggagtttagtagcctttag
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| Protein seq | MEENIGKLDNTIKNLEVRKNEIQIRLSISEGKQETCNPEVTEWLQKVAAMETEVNEIKNVQRKRKQLFSYWSKYEIGMQAAKKLKEAEMLHEKGAFKEVSFEVPPYFVQEVPTIPSTEETECNLKEVLQYLKDDNVGILGIWGMGGVGKTTLLRKINNHFLGVTKENYGFDLVVYVVASTASGIGQLQADIAERIGLFLKPGCSINIRASFLLSFLRRKKFLLLIDDLWGYLDLAEAGIPYPNGLNKQKVVLATRSESVCGHMGAHKTIFMECLDQEKAWRLFKEKATEEVISSDVRIESLAKEVAEECGGLPLALATLGRAMSTKRTRHEWALALSYLKKSRIHEIPNMGNTSHIYTRLKLSYDYLQDKQIKYCFLCCSLWPEGYSIWKVALIDCWMGMGLIEYDTIEEAYDKGHSIIEYLKNACLLEAGYLEDREVRIHDIIRDMALSISSGCVDQSMNWIVQAGVGIHKIDSRDIEKWRSARKISLMCNYISELPHAISCYNLQYLSLQQNFWLNVIPPSLFKCLSSVTYLDLSWIPIKELPEEIGALVELQCLKLNQTLIKSLPVAIGQLTKLKYLNLSYMDFLEKIPYGVIPNLSKLQVLDLYGSRYAGCEEGFHSRSHMDYDEFRIEELSCLTRELKALGITIKKVSTLKKLLDIHGSHMRLLGLYKLSGETSLALTIPDSVLVLNITDCSELKEFSVTNKPQCYGDHLPRLEFLTFWDLPRIEKISMGHIQNLRVLYVGKAHQLMDMSCILKLPHLEQLDVSFCNKMKQLVHIKNKINTEVQDEMPIQGFRRLRILQLNSLPSLENFCNFSLDLPSLEYFDVFACPKLRRLPFGHAIVKLKSVMGEKTWWDNLKWDDENSPLLLFPFFKASETRIASLRPELDTSVASSPKAFFTKRQPYLSSSIRYTSFLKSMFEAEEFSSL
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 2.066778 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0956800 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g72680 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0956800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0047550 | RBH | 0.0 | 1.966189 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0047030 | RBH | 0.0 | 1.296630 | 0.422117 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0047510 | RBH | 0.0 | 0.679292 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0046910 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0046440 | RBH | 0.0 | 1.031652 | 0.012064 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0691400 | RBH | 0.0422735 | 1.0216635 | 0.0619275 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0045950 | RBH | 0.0 | 0.0 | 0.044126 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0692800 | RBH | 0.0351875 | 2.381341 | 0.062397 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0046540 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0046370 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0046700 | RBH | 0.0 | 2.260731 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0046690 | RBH | 0.0 | 0.084341 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0046460 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G046720 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_05g0014910 | SBH | 0.0 | 16.132452 | 0.672282 |
