Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_01g0040800 | OGI:01111770 | 9/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr01:38057970-38065064 | ||||||||
| Gene Symbol | OsSub10, SUB10, OsSub11, SUB11 | ||||||||||
| DNA seq | atggcgaccagcgcttcacacgcgcgtgcaccgctgctcctcctgctgctgatgtgttcgtgtttgcttctctctcccgtggcggccgaccgggcggcgtacatcgtccacatggacaagtccgccatgccggcgcatcactccgaccaccgcgagtggtactccgccaccgtggcgactctgactcccggtgcgccgcgcggcggccgtggcgggccgcggatcgtgtacacctacgacgaggcgttgcacgggttcgcggccacgctctccgcctccgagctcggcgcgctccgcctcgcaccgggcttcgtctcggcttaccctgatcgccgcgccgatgtgcttcatgacaccacgCActccacggagttcctccgtctcagcctgttcGGTgggctgtggccggcggcgaggttcggcgagggcgtcatcatcggcgtgatcgacacgggtgtctggccggagagcgcgagcttcgacgacggcggcatgccgcccgtgccgtcgcggtggcgcggcgagtgcgaggctggacaggacttcacgcccgacatgtgtaaccggaagctcatcggagcgcgctacttcaacaggggcctggtcgccgcgaacccgaccgtcaccgtctccatgaactcgacgcgcgacacgctaggccacgggacgcacacgtcgtccaccgccggcgggagccccgcgccgtgcgcgtccttcttcggctacgggcgcggcacggcgcgcggcgtggcgccgcgcgcgcacgtcgccatgtacaaggccatgtggcccgagggccggtacgcgtccgacgtgctggccgccatggacgccgccatcgcggacggcgtcgacgtcatctccatctcgagcggcttcgacggcgtgccgctgtacgaagaccccgtggcgatcgccgcgttcgccgccatcgagcgcggcatcatcgtctcggcctcagctggcaacgacggcccgaggcttggcaccctgcacaacggcatcccgtggcttctcaccgtcgccgccggcacggtggaccggcaaatgttcgccGgatccatctacctcggcgacgacacgcggagcaccatcaccggcatcacgaGgtatccagagaacgcgtggataaaggacatgaacttggtgtacaacgacaccatatcagcgtgcaactcgtcgacgtcgctggcaaccctagcacaaagcatagtcgtgtgctatgacactgggattctgctcgaccagatgcggacggcggcggaggccggcgtcagcgcggccatcttcatctcgaacaccaccttgataacccagagcgagatgaccttcccggccatcgtcgtcaacccgagcgacgcggcgagcctactgagctacatcaactccagcgcgcggccgacggcgacgatcaagttccagcagacgatcatcgggacgaggccggcgccggtggtcgccgcgtactcctcgcgtggaccgtcgcggagctacgagggcgtgctcaagccggacatcatggcgccGggggacagtatactcgcggcGTgggcacccgttgctccgctggcgcaggtaggaAGCaccgccctcggcagcgacttcgccgtcgagtccgggacgtcgatggcgtgcccgcacgccgccggcgtggcagcattgctgcgggcggcgcacccggactggagcccggccatgatcaagtcggcgatgatgaccaccgcgaccgccgtcgacaacacgttccggccgatcggtgacgccggccacggcgacgccgcggcgagcccgctggcgataggcgccgggcaggtcgacccgaacgcggccatggacccggggctggtgtacgacgccgggccggaggacttcgtggagctcctctgctcgaccaacttcaccgccgcgcagatcatggcgatcacgcggtccaaggcgtacaactgctccttctccaccaacgacatgaactacccgtccttcatcgccgtgttcggcgcgaacgacacctccggcgacatgaggttcagcaggacggtgaccaacgtcggcgcaggcgccgcgacgtacagggcgttctcggtgtcaccgagcaacgtggaggtgaccgtgtcgccggagaccctggtgttcaccgaggtggggcagacggcgtcgttcttggtggacctcaacctcacggcgcccaccggcggcgagccggcgttcggggcggtgatctgggccgatgtgagcggcaagtacgaggtgaggactcactacgtcgtgctatgacggtcaaccttggtcttctagtcatgtcggacttctgtgtgctggtcggaataatgtcgtggaacaaacatccattcttatggattgggatcctctaacatgatataagaggaacatagtgattgataTGtgaccCCAccactcatgggcccacctgtcagtgattacgtcaggtacagtttatatcaaaggatccggatctctattttacacgccattacggttacAaaaggctattacacaagcattaagtgaaccccgtcacccaacaattttctttaagtttatatAaacttGAgtttattacaagagttcttatcatcctttagggaaggcggtactaaatccaggccgtctatctcgcacaatctaagggttggaattgctttgtaccaggtggtactacgtccctaagagagaatttccaACTatgagtgggagggtaaaattgtactttcgcatatacactctcgtttctatcggtttatctgacacaacctcagcgtacatcgccgccgccgcaaatcggggatgaatggagacgcctcaaatccggcttgatgctagctcatcgatgcattcggtgccaatgccctacaggccgctacctatatcgttcacgtgctcaacccaaatcgaaagccccgccatgaagttcgatgacgcggacggccaccatcggcaccgatgccatggactgtgaggacgctgcatattcatgaggagttatatggcggagtgaTtttgatccctcgaggggatgtccccttattgtgtgcatgctactcaaatggttataggAaaaaaaaaattgagaagatgtattaacatgtgatatagcactccataaacatgcaagttcaaattcaattttacatctcacaacgAaaaaaataaatttaactgttaatatatgttaactagttgtagtttaatttgTttttttccgtAacgagatgtataagttgaatttgaatttacatatttatggagcgatgtatCAcatgttagtacatgtTAtatatttttttgatttttttcataatcatttgagtgacatgcaacaaacgagggatatacccatgagggATaaaaagagttacccttAaatgacaaccgACTactatcatcagcgctgagatagcgtggatgctgccgatgCccggtatgctcTtttttctcctcaatacttgcgcattccacattcatAaaaacaaggcttctaacgacaccaaacaattcataacaacgaattcaagacactgcgggctatgatcgatccatcgagtaaacaaagcatgaaaaacgtatatttagcacacttgcacagccgcttgcctttgctgatcccagccttacggtggccttataagccttaggcccaaataggtacgttttttttttctagtttttccctattttgtgacataaaaatagatcgaaactttatatccaaaTtttgtatttaaagactttgatttcTtttactatttagccgttttaaatatttttaaattcgagtaaaattttgtattaaggagggcgagacaccacctctccccctaagagcAtgcgcggattagcatccccgtacgaggaattgttcaagaccgcaagctaatctagtactccctcaatactcgtaaaggaagatgtttaggacaatgtttaagtcaaaccttgggaatatAaatcatgaacaactcttaagttgttgagtttaaaaatgtaaaaattatatgaatagatttgtcttgaaaaatacttttatgaaagtatacatatatcacttttcaatgAatatttttatagaaacaagaagtcaatgttgtgttttggagaccgtgtcaatgtcctaaacgacttcctttgtgagtatgaagggagtacagttcatttatgcgtccagggatcagTtactacatccgtcttaaaatataataattttttgctatAaatttgaacacataattatttcgattcctgaaaatatttatattttaagacggatgaagtattagttaagctaccgcgccgtgcatggcaacacgacgaaacaccagcagcatccccgtgaTTttgggtgttccccggtacgcctcatggcgagacttgATataagtgcatctgtgcatggctcgcgagacctgaaaaccgtatatgtgggcgtgtggttgagaacttgattggGATgatgatgagacccggtgggtcgaacaacaagcgtacgtagacgagccaacgcgcgtacgccatttttcccggccctgcgtcacacggcactcttgtCccgtatccgcgccccgcgttcgcatcgatcgatcaaccggccaaccgccccagatatggcctctcgcgcgcgcGgggacccaagcAaccaccgggcaaatccaacgcccaattcgtcgagagatttttcagctggtgcgtagacgtcgctaacccccatcgcctgctagtataataagatgacgcctacgtcgttccgtgcctgaatccgtggcacagctacgtacgtacgtgcgtgctcgttacacgtatatggcggcgtcgctggcaatcgttgccgtggtcgtcgcgctgtgcgtggcggctgccgcgtcggccgagacggcgacgtacatcgtgcacatggacaagtcggcaatgccGAgcggcggcggcgGCgggaacgggtcgaccagcctggagagctggtacgcggccacgctccgggcggcggcgccgggcgccagaatgatctacgtgtaccgcaacgccatgagcgggttcgccgcgaggctgtCcgccgagcagcacgcgaggctgagccggtccccgggtttcctctcgtcctacctcgacgcccccgtgacgcggcgcgacaccacgcacacgccggagttcctcggggtgagcggcgctgggggcctgtGggagacggcCAGctacggcgacggcgtcatcgtcggcgtggtggacaccggggtgtggcccgagagcgggagctaccgcgacgacgggctcccgccggtgcccgcgcggtggaagggctactgcgagtccggcacgcggttcgacggcgccaaggcgtgcaaccggaagctcatcggggcgcgcaagttcagcgcgggcctcgccgccgcgctggggaggcggaacatcacgatcgccgtgaactcgccgcgcgacacggacggccacggcacgcacacctcgtcgacggccgccggctcgcccgtcccgggggcgtcctacttcggctacgctcccGgggtggcacggggcatggcgccacgcgccagggtggccgtgtacaaggtcctgttcgacgagggcgggtacacgacggacatcgtcgccgccatagaccaagccatcgcagacggcgtcgacgtgctctccatctcgctgggcctcaacaaccgcccgctccacaccgaccctgtggccatcggctcgttcgccgcaatgcagcacggcatcttcgtgtccacctcagccggcaacgacggcccgggcctctccgtcctccacaacggcgcgccgtgggcactgaccgtcgccgctggcaccgtggacagggagttctccggcatcgtcgagctcggcgatggcaccaccgtcatcggcgaatcgctgtacgccggctcgccgccgatcacccagagcactccactcgtgtacctcgactcctgcgacaacttcaccgccatcagacgaaaccgcgacaagatcgtgctgtgtgatgcacaagcttcctcctttgctctgcaggttgcagtgcagttcgtgcaagatgccaacgcggccggcgggctcttcttgaccaacgacccgttcaggctgctgttcgagcagttcacgttcccgggcgccctgctgagcccgcacgacgggccggcgatactgcggtacatccagaggagcggcgctccgacggccaagatcgcgttccgggcgacgctgctgaacacgaagccggcgccggaggcggcggcgtactcgtcgcgcgggccggcggtgagctgcccgacggtgctcaagccggacatcatggcgcctggctcgctcgtgctcgcgtcgtgggcggagagcgtggccgtggtcgggaacatgacgtcgccgttcaacatcatctccgggacgtcgatggcgacgccgcacgcggcgggcgtcgcggcgctgctcagggcggtgcacccggagtggagcccggcggccatccggtcggcgatgatgacgacggccgcgacgctggacaacaccggcaggtccatcaacgacatggcccggGCgggccacgccgcgacgccgctggcgatggggtccggccacatcgacccgaacagggcggcggacccgggcctcgtctacgacgccgtcccgggtgactacgtcgagctcatgtgcgccatggggtacaacctctcggacatcagggccgtgacgcagtggtcgacctacgccgtgaactgcagcggcgcgttgtcgccggacctcaactacccgtcgttcatcgcctacttcgacaggcgcagcgccgccgccgccgcggagaccaagacgttcgtcagggtggtcaccaacgtcggcgccggcgcggcgagctacagggcgaaggtgaagggcaacctggatgggctcgccgtcagcgtcacgccgagcaggctggtgttcgggaagaagggcgagacgcagaagtacacgctggtgttgcgcggcaagatcaagggcgcggacaaggtgctgcacgggtcgctgacgtgggtggatgacgccggcaagtacacggtgaggagtccgattgtggcaacgactttgagctcaacacggctgtag
More
|
||||||||||
| CDS seq | atggcgaccagcgcttcacacgcgcgtgcaccgctgctcctcctgctgctgatgtgttcgtgtttgcttctctctcccgtggcggccgaccgggcggcgtacatcgtccacatggacaagtccgccatgccggcgcatcactccgaccaccgcgagtggtactccgccaccgtggcgactctgactcccggtgcgccgcgcggcggccgtggcgggccgcggatcgtgtacacctacgacgaggcgttgcacgggttcgcggccacgctctccgcctccgagctcggcgcgctccgcctcgcaccgggcttcgtctcggcttaccctgatcgccgcgccgatgtgcttcatgacaccacgCActccacggagttcctccgtctcagcctgttcGGTgggctgtggccggcggcgaggttcggcgagggcgtcatcatcggcgtgatcgacacgggtgtctggccggagagcgcgagcttcgacgacggcggcatgccgcccgtgccgtcgcggtggcgcggcgagtgcgaggctggacaggacttcacgcccgacatgtgtaaccggaagctcatcggagcgcgctacttcaacaggggcctggtcgccgcgaacccgaccgtcaccgtctccatgaactcgacgcgcgacacgctaggccacgggacgcacacgtcgtccaccgccggcgggagccccgcgccgtgcgcgtccttcttcggctacgggcgcggcacggcgcgcggcgtggcgccgcgcgcgcacgtcgccatgtacaaggccatgtggcccgagggccggtacgcgtccgacgtgctggccgccatggacgccgccatcgcggacggcgtcgacgtcatctccatctcgagcggcttcgacggcgtgccgctgtacgaagaccccgtggcgatcgccgcgttcgccgccatcgagcgcggcatcatcgtctcggcctcagctggcaacgacggcccgaggcttggcaccctgcacaacggcatcccgtggcttctcaccgtcgccgccggcacggtggaccggcaaatgttcgccGgatccatctacctcggcgacgacacgcggagcaccatcaccggcatcacgaGgtatccagagaacgcgtggataaaggacatgaacttggtgtacaacgacaccatatcagcgtgcaactcgtcgacgtcgctggcaaccctagcacaaagcatagtcgtgtgctatgacactgggattctgctcgaccagatgcggacggcggcggaggccggcgtcagcgcggccatcttcatctcgaacaccaccttgataacccagagcgagatgaccttcccggccatcgtcgtcaacccgagcgacgcggcgagcctactgagctacatcaactccagcgcgcggccgacggcgacgatcaagttccagcagacgatcatcgggacgaggccggcgccggtggtcgccgcgtactcctcgcgtggaccgtcgcggagctacgagggcgtgctcaagccggacatcatggcgccGggggacagtatactcgcggcGTgggcacccgttgctccgctggcgcaggtaggaAGCaccgccctcggcagcgacttcgccgtcgagtccgggacgtcgatggcgtgcccgcacgccgccggcgtggcagcattgctgcgggcggcgcacccggactggagcccggccatgatcaagtcggcgatgatgaccaccgcgaccgccgtcgacaacacgttccggccgatcggtgacgccggccacggcgacgccgcggcgagcccgctggcgataggcgccgggcaggtcgacccgaacgcggccatggacccggggctggtgtacgacgccgggccggaggacttcgtggagctcctctgctcgaccaacttcaccgccgcgcagatcatggcgatcacgcggtccaaggcgtacaactgctccttctccaccaacgacatgaactacccgtccttcatcgccgtgttcggcgcgaacgacacctccggcgacatgaggttcagcaggacggtgaccaacgtcggcgcaggcgccgcgacgtacagggcgttctcggtgtcaccgagcaacgtggaggtgaccgtgtcgccggagaccctggtgttcaccgaggtggggcagacggcgtcgttcttggtggacctcaacctcacggcgcccaccggcggcgagccggcgttcggggcggtgatctgggccgatgtgagcggcaagtacgaggtgaggactcactacgtcacggcgacgtacatcgtgcacatggacaagtcggcaatgccGAgcggcggcggcgGCgggaacgggtcgaccagcctggagagctggtacgcggccacgctccgggcggcggcgccgggcgccagaatgatctacgtgtaccgcaacgccatgagcgggttcgccgcgaggctgtCcgccgagcagcacgcgaggctgagccggtccccgggtttcctctcgtcctacctcgacgcccccgtgacgcggcgcgacaccacgcacacgccggagttcctcggggtgagcggcgctgggggcctgtGggagacggcCAGctacggcgacggcgtcatcgtcggcgtggtggacaccggggtgtggcccgagagcgggagctaccgcgacgacgggctcccgccggtgcccgcgcggtggaagggctactgcgagtccggcacgcggttcgacggcgccaaggcgtgcaaccggaagctcatcggggcgcgcaagttcagcgcgggcctcgccgccgcgctggggaggcggaacatcacgatcgccgtgaactcgccgcgcgacacggacggccacggcacgcacacctcgtcgacggccgccggctcgcccgtcccgggggcgtcctacttcggctacgctcccGgggtggcacggggcatggcgccacgcgccagggtggccgtgtacaaggtcctgttcgacgagggcgggtacacgacggacatcgtcgccgccatagaccaagccatcgcagacggcgtcgacgtgctctccatctcgctgggcctcaacaaccgcccgctccacaccgaccctgtggccatcggctcgttcgccgcaatgcagcacggcatcttcgtgtccacctcagccggcaacgacggcccgggcctctccgtcctccacaacggcgcgccgtgggcactgaccgtcgccgctggcaccgtggacagggagttctccggcatcgtcgagctcggcgatggcaccaccgtcatcggcgaatcgctgtacgccggctcgccgccgatcacccagagcactccactcgtgtacctcgactcctgcgacaacttcaccgccatcagacgaaaccgcgacaagatcgtgctgtgtgatgcacaagcttcctcctttgctctgcaggttgcagtgcagttcgtgcaagatgccaacgcggccggcgggctcttcttgaccaacgacccgttcaggctgctgttcgagcagttcacgttcccgggcgccctgctgagcccgcacgacgggccggcgatactgcggtacatccagaggagcggcgctccgacggccaagatcgcgttccgggcgacgctgctgaacacgaagccggcgccggaggcggcggcgtactcgtcgcgcgggccggcggtgagctgcccgacggtgctcaagccggacatcatggcgcctggctcgctcgtgctcgcgtcgtgggcggagagcgtggccgtggtcgggaacatgacgtcgccgttcaacatcatctccgggacgtcgatggcgacgccgcacgcggcgggcgtcgcggcgctgctcagggcggtgcacccggagtggagcccggcggccatccggtcggcgatgatgacgacggccgcgacgctggacaacaccggcaggtccatcaacgacatggcccggGCgggccacgccgcgacgccgctggcgatggggtccggccacatcgacccgaacagggcggcggacccgggcctcgtctacgacgccgtcccgggtgactacgtcgagctcatgtgcgccatggggtacaacctctcggacatcagggccgtgacgcagtggtcgacctacgccgtgaactgcagcggcgcgttgtcgccggacctcaactacccgtcgttcatcgcctacttcgacaggcgcagcgccgccgccgccgcggagaccaagacgttcgtcagggtggtcaccaacgtcggcgccggcgcggcgagctacagggcgaaggtgaagggcaacctggatgggctcgccgtcagcgtcacgccgagcaggctggtgttcgggaagaagggcgagacgcagaagtacacgctggtgttgcgcggcaagatcaagggcgcggacaaggtgctgcacgggtcgctgacgtgggtggatgacgccggcaagtacacggtgaggagtccgattgtggcaacgactttgagctcaacacggctgtag
More
|
||||||||||
| Protein seq | MATSASHARAPLLLLLLMCSCLLLSPVAADRAAYIVHMDKSAMPAHHSDHREWYSATVATLTPGAPRGGRGGPRIVYTYDEALHGFAATLSASELGALRLAPGFVSAYPDRRADVLHDTTHSTEFLRLSLFGGLWPAARFGEGVIIGVIDTGVWPESASFDDGGMPPVPSRWRGECEAGQDFTPDMCNRKLIGARYFNRGLVAANPTVTVSMNSTRDTLGHGTHTSSTAGGSPAPCASFFGYGRGTARGVAPRAHVAMYKAMWPEGRYASDVLAAMDAAIADGVDVISISSGFDGVPLYEDPVAIAAFAAIERGIIVSASAGNDGPRLGTLHNGIPWLLTVAAGTVDRQMFAGSIYLGDDTRSTITGITRYPENAWIKDMNLVYNDTISACNSSTSLATLAQSIVVCYDTGILLDQMRTAAEAGVSAAIFISNTTLITQSEMTFPAIVVNPSDAASLLSYINSSARPTATIKFQQTIIGTRPAPVVAAYSSRGPSRSYEGVLKPDIMAPGDSILAAWAPVAPLAQVGSTALGSDFAVESGTSMACPHAAGVAALLRAAHPDWSPAMIKSAMMTTATAVDNTFRPIGDAGHGDAAASPLAIGAGQVDPNAAMDPGLVYDAGPEDFVELLCSTNFTAAQIMAITRSKAYNCSFSTNDMNYPSFIAVFGANDTSGDMRFSRTVTNVGAGAATYRAFSVSPSNVEVTVSPETLVFTEVGQTASFLVDLNLTAPTGGEPAFGAVIWADVSGKYEVRTHYVTATYIVHMDKSAMPSGGGGGNGSTSLESWYAATLRAAAPGARMIYVYRNAMSGFAARLSAEQHARLSRSPGFLSSYLDAPVTRRDTTHTPEFLGVSGAGGLWETASYGDGVIVGVVDTGVWPESGSYRDDGLPPVPARWKGYCESGTRFDGAKACNRKLIGARKFSAGLAAALGRRNITIAVNSPRDTDGHGTHTSSTAAGSPVPGASYFGYAPGVARGMAPRARVAVYKVLFDEGGYTTDIVAAIDQAIADGVDVLSISLGLNNRPLHTDPVAIGSFAAMQHGIFVSTSAGNDGPGLSVLHNGAPWALTVAAGTVDREFSGIVELGDGTTVIGESLYAGSPPITQSTPLVYLDSCDNFTAIRRNRDKIVLCDAQASSFALQVAVQFVQDANAAGGLFLTNDPFRLLFEQFTFPGALLSPHDGPAILRYIQRSGAPTAKIAFRATLLNTKPAPEAAAYSSRGPAVSCPTVLKPDIMAPGSLVLASWAESVAVVGNMTSPFNIISGTSMATPHAAGVAALLRAVHPEWSPAAIRSAMMTTAATLDNTGRSINDMARAGHAATPLAMGSGHIDPNRAADPGLVYDAVPGDYVELMCAMGYNLSDIRAVTQWSTYAVNCSGALSPDLNYPSFIAYFDRRSAAAAAETKTFVRVVTNVGAGAASYRAKVKGNLDGLAVSVTPSRLVFGKKGETQKYTLVLRGKIKGADKVLHGSLTWVDDAGKYTVRSPIVATTLSSTRL |
||||||||||
| Function | Subtilisin-like protease SBT3 [UniProtKB/Swiss-Prot:O82777] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_01g0040800 | OsNaBo_01g0040800.01 | Chr01 | 38057970 | 38065064 | + | NAM | ||
| CDS seq | atggcgaccagcgcttcacacgcgcgtgcaccgctgctcctcctgctgctgatgtgttcgtgtttgcttctctctcccgtggcggccgaccgggcggcgtacatcgtccacatggacaagtccgccatgccggcgcatcactccgaccaccgcgagtggtactccgccaccgtggcgactctgactcccggtgcgccgcgcggcggccgtggcgggccgcggatcgtgtacacctacgacgaggcgttgcacgggttcgcggccacgctctccgcctccgagctcggcgcgctccgcctcgcaccgggcttcgtctcggcttaccctgatcgccgcgccgatgtgcttcatgacaccacgCActccacggagttcctccgtctcagcctgttcGGTgggctgtggccggcggcgaggttcggcgagggcgtcatcatcggcgtgatcgacacgggtgtctggccggagagcgcgagcttcgacgacggcggcatgccgcccgtgccgtcgcggtggcgcggcgagtgcgaggctggacaggacttcacgcccgacatgtgtaaccggaagctcatcggagcgcgctacttcaacaggggcctggtcgccgcgaacccgaccgtcaccgtctccatgaactcgacgcgcgacacgctaggccacgggacgcacacgtcgtccaccgccggcgggagccccgcgccgtgcgcgtccttcttcggctacgggcgcggcacggcgcgcggcgtggcgccgcgcgcgcacgtcgccatgtacaaggccatgtggcccgagggccggtacgcgtccgacgtgctggccgccatggacgccgccatcgcggacggcgtcgacgtcatctccatctcgagcggcttcgacggcgtgccgctgtacgaagaccccgtggcgatcgccgcgttcgccgccatcgagcgcggcatcatcgtctcggcctcagctggcaacgacggcccgaggcttggcaccctgcacaacggcatcccgtggcttctcaccgtcgccgccggcacggtggaccggcaaatgttcgccGgatccatctacctcggcgacgacacgcggagcaccatcaccggcatcacgaGgtatccagagaacgcgtggataaaggacatgaacttggtgtacaacgacaccatatcagcgtgcaactcgtcgacgtcgctggcaaccctagcacaaagcatagtcgtgtgctatgacactgggattctgctcgaccagatgcggacggcggcggaggccggcgtcagcgcggccatcttcatctcgaacaccaccttgataacccagagcgagatgaccttcccggccatcgtcgtcaacccgagcgacgcggcgagcctactgagctacatcaactccagcgcgcggccgacggcgacgatcaagttccagcagacgatcatcgggacgaggccggcgccggtggtcgccgcgtactcctcgcgtggaccgtcgcggagctacgagggcgtgctcaagccggacatcatggcgccGggggacagtatactcgcggcGTgggcacccgttgctccgctggcgcaggtaggaAGCaccgccctcggcagcgacttcgccgtcgagtccgggacgtcgatggcgtgcccgcacgccgccggcgtggcagcattgctgcgggcggcgcacccggactggagcccggccatgatcaagtcggcgatgatgaccaccgcgaccgccgtcgacaacacgttccggccgatcggtgacgccggccacggcgacgccgcggcgagcccgctggcgataggcgccgggcaggtcgacccgaacgcggccatggacccggggctggtgtacgacgccgggccggaggacttcgtggagctcctctgctcgaccaacttcaccgccgcgcagatcatggcgatcacgcggtccaaggcgtacaactgctccttctccaccaacgacatgaactacccgtccttcatcgccgtgttcggcgcgaacgacacctccggcgacatgaggttcagcaggacggtgaccaacgtcggcgcaggcgccgcgacgtacagggcgttctcggtgtcaccgagcaacgtggaggtgaccgtgtcgccggagaccctggtgttcaccgaggtggggcagacggcgtcgttcttggtggacctcaacctcacggcgcccaccggcggcgagccggcgttcggggcggtgatctgggccgatgtgagcggcaagtacgaggtgaggactcactacgtcacggcgacgtacatcgtgcacatggacaagtcggcaatgccGAgcggcggcggcgGCgggaacgggtcgaccagcctggagagctggtacgcggccacgctccgggcggcggcgccgggcgccagaatgatctacgtgtaccgcaacgccatgagcgggttcgccgcgaggctgtCcgccgagcagcacgcgaggctgagccggtccccgggtttcctctcgtcctacctcgacgcccccgtgacgcggcgcgacaccacgcacacgccggagttcctcggggtgagcggcgctgggggcctgtGggagacggcCAGctacggcgacggcgtcatcgtcggcgtggtggacaccggggtgtggcccgagagcgggagctaccgcgacgacgggctcccgccggtgcccgcgcggtggaagggctactgcgagtccggcacgcggttcgacggcgccaaggcgtgcaaccggaagctcatcggggcgcgcaagttcagcgcgggcctcgccgccgcgctggggaggcggaacatcacgatcgccgtgaactcgccgcgcgacacggacggccacggcacgcacacctcgtcgacggccgccggctcgcccgtcccgggggcgtcctacttcggctacgctcccGgggtggcacggggcatggcgccacgcgccagggtggccgtgtacaaggtcctgttcgacgagggcgggtacacgacggacatcgtcgccgccatagaccaagccatcgcagacggcgtcgacgtgctctccatctcgctgggcctcaacaaccgcccgctccacaccgaccctgtggccatcggctcgttcgccgcaatgcagcacggcatcttcgtgtccacctcagccggcaacgacggcccgggcctctccgtcctccacaacggcgcgccgtgggcactgaccgtcgccgctggcaccgtggacagggagttctccggcatcgtcgagctcggcgatggcaccaccgtcatcggcgaatcgctgtacgccggctcgccgccgatcacccagagcactccactcgtgtacctcgactcctgcgacaacttcaccgccatcagacgaaaccgcgacaagatcgtgctgtgtgatgcacaagcttcctcctttgctctgcaggttgcagtgcagttcgtgcaagatgccaacgcggccggcgggctcttcttgaccaacgacccgttcaggctgctgttcgagcagttcacgttcccgggcgccctgctgagcccgcacgacgggccggcgatactgcggtacatccagaggagcggcgctccgacggccaagatcgcgttccgggcgacgctgctgaacacgaagccggcgccggaggcggcggcgtactcgtcgcgcgggccggcggtgagctgcccgacggtgctcaagccggacatcatggcgcctggctcgctcgtgctcgcgtcgtgggcggagagcgtggccgtggtcgggaacatgacgtcgccgttcaacatcatctccgggacgtcgatggcgacgccgcacgcggcgggcgtcgcggcgctgctcagggcggtgcacccggagtggagcccggcggccatccggtcggcgatgatgacgacggccgcgacgctggacaacaccggcaggtccatcaacgacatggcccggGCgggccacgccgcgacgccgctggcgatggggtccggccacatcgacccgaacagggcggcggacccgggcctcgtctacgacgccgtcccgggtgactacgtcgagctcatgtgcgccatggggtacaacctctcggacatcagggccgtgacgcagtggtcgacctacgccgtgaactgcagcggcgcgttgtcgccggacctcaactacccgtcgttcatcgcctacttcgacaggcgcagcgccgccgccgccgcggagaccaagacgttcgtcagggtggtcaccaacgtcggcgccggcgcggcgagctacagggcgaaggtgaagggcaacctggatgggctcgccgtcagcgtcacgccgagcaggctggtgttcgggaagaagggcgagacgcagaagtacacgctggtgttgcgcggcaagatcaagggcgcggacaaggtgctgcacgggtcgctgacgtgggtggatgacgccggcaagtacacggtgaggagtccgattgtggcaacgactttgagctcaacacggctgtag
More
|
|||||||
| Protein seq | MATSASHARAPLLLLLLMCSCLLLSPVAADRAAYIVHMDKSAMPAHHSDHREWYSATVATLTPGAPRGGRGGPRIVYTYDEALHGFAATLSASELGALRLAPGFVSAYPDRRADVLHDTTHSTEFLRLSLFGGLWPAARFGEGVIIGVIDTGVWPESASFDDGGMPPVPSRWRGECEAGQDFTPDMCNRKLIGARYFNRGLVAANPTVTVSMNSTRDTLGHGTHTSSTAGGSPAPCASFFGYGRGTARGVAPRAHVAMYKAMWPEGRYASDVLAAMDAAIADGVDVISISSGFDGVPLYEDPVAIAAFAAIERGIIVSASAGNDGPRLGTLHNGIPWLLTVAAGTVDRQMFAGSIYLGDDTRSTITGITRYPENAWIKDMNLVYNDTISACNSSTSLATLAQSIVVCYDTGILLDQMRTAAEAGVSAAIFISNTTLITQSEMTFPAIVVNPSDAASLLSYINSSARPTATIKFQQTIIGTRPAPVVAAYSSRGPSRSYEGVLKPDIMAPGDSILAAWAPVAPLAQVGSTALGSDFAVESGTSMACPHAAGVAALLRAAHPDWSPAMIKSAMMTTATAVDNTFRPIGDAGHGDAAASPLAIGAGQVDPNAAMDPGLVYDAGPEDFVELLCSTNFTAAQIMAITRSKAYNCSFSTNDMNYPSFIAVFGANDTSGDMRFSRTVTNVGAGAATYRAFSVSPSNVEVTVSPETLVFTEVGQTASFLVDLNLTAPTGGEPAFGAVIWADVSGKYEVRTHYVTATYIVHMDKSAMPSGGGGGNGSTSLESWYAATLRAAAPGARMIYVYRNAMSGFAARLSAEQHARLSRSPGFLSSYLDAPVTRRDTTHTPEFLGVSGAGGLWETASYGDGVIVGVVDTGVWPESGSYRDDGLPPVPARWKGYCESGTRFDGAKACNRKLIGARKFSAGLAAALGRRNITIAVNSPRDTDGHGTHTSSTAAGSPVPGASYFGYAPGVARGMAPRARVAVYKVLFDEGGYTTDIVAAIDQAIADGVDVLSISLGLNNRPLHTDPVAIGSFAAMQHGIFVSTSAGNDGPGLSVLHNGAPWALTVAAGTVDREFSGIVELGDGTTVIGESLYAGSPPITQSTPLVYLDSCDNFTAIRRNRDKIVLCDAQASSFALQVAVQFVQDANAAGGLFLTNDPFRLLFEQFTFPGALLSPHDGPAILRYIQRSGAPTAKIAFRATLLNTKPAPEAAAYSSRGPAVSCPTVLKPDIMAPGSLVLASWAESVAVVGNMTSPFNIISGTSMATPHAAGVAALLRAVHPEWSPAAIRSAMMTTAATLDNTGRSINDMARAGHAATPLAMGSGHIDPNRAADPGLVYDAVPGDYVELMCAMGYNLSDIRAVTQWSTYAVNCSGALSPDLNYPSFIAYFDRRSAAAAAETKTFVRVVTNVGAGAASYRAKVKGNLDGLAVSVTPSRLVFGKKGETQKYTLVLRGKIKGADKVLHGSLTWVDDAGKYTVRSPIVATTLSSTRL
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0868900 | RBH | 0.0 | 0.000000 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g64860 | RBH | 0.0 | 0.000000 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0868800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0041710 | RBH | 0.0 | 0.585877 | 0.173130 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0041240 | RBH | 0.0 | 0.000000 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0041630 | RBH | 0.0 | 0.000000 | 0.295646 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0041100 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0040650 | RBH | 0.0 | 0.0 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0619700 | RBH | 12.415747 | 0.536567 | 0.5502245 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0040320 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0619200 | RBH | 0.0075505 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0040670 | RBH | 0.0 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0040620 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0040870 | RBH | 0.0 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0040820 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0040690 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G041130 | RBH | 0.0 | 0.0 | 1.925470 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_05g0018230 | RBH | 0.339264 | 5.606473 | 2.146521 |
