Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_01g0034300 | OGI:01097660 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr01:32995965-32999152 | ||||||||
| Gene Symbol | DRUS2, YK1, OsCrRLK1L5, FLR2 | ||||||||||
| DNA seq | ggagctcgcttgctttgccgttgccgacgtcgcccccaatctcccgcataacgccgcggccgtagtagtcccgaaacctccctcccccacattgcttgtctcctccaccttgaacccgagtttctcacccacatccaccagatctgcgaggaggtaggaaagctcgatgcccgatctgtgaagcggaagcagttagctagttgtagttgagagcgggggtggccacaatgggaagctccagattcgtgctcttgctcctcctcctcctcgccgtggcggcttgcgtcgcgcgggggcaaggcggcggaaactcgagcagcgcggcggcgccggcgccggctgcgggggcggggccgttcgtgccgcgggacgacatcctgctcgactgcggcgcgacggggaaggggaacgacacggacgggcgggtgtggagcggggacgccgggtccaagtacgcgccggcgagcctcggctcggcgtccgccgcggggcaggaCccctcggtgccgcaggtgccctacctcaccgcgagggtctccgcggcgcccttcacctactccttcccgctcggcgccggccgcaagttcctcaggctccacttctacccggccaactactccagccgcgacgccgccgacgcgcgcttctccgtctccgtccccgccgccaacgtcacactcctctccaacttcagcgcctaccagaccgccaccgccctcaacttcgcctacatcgtccgcgagttctccgtcaacgtcacgaccccgacgatggagctcaccttcacgccggagaagggccaccccaacgcctacgcgttcgtcaacggcatcgaggttgtctcctcccccgatctcttcgacatctCCAccccgaacctggtcaccggggatggcaacaatcagccattcccgatcgacgctggcactgctctgcagacaatgtaccgacttaatgtcggcggccaggcgatctccccctccaaggacacgggcggttaccgttcgtgggacaatgactcgccatacgtttttggtgcggcgttcggggtgtcctacccaaaagatgacaatgtcaccattgcctaccctagcaatgtgccggagtatgtggcgccagtggatgtctatgctacggcaaggtcgatggggccggacaagaacgtgaacttggcatacaacctcacttggataatgcaggtggatgctgggttcacataccttgtgaggcttcatttctgtgagatacaatatccaatcactatgatcaatcagcgggtgttcaacaTttacatcaacaaccagactgcttttcagggcgccgatgtgattgcgtggactaataacaatgggatcggcagtccagtgtatcaagactttgtagtgacaacagttggttcaggggctatggatttgtgggtagCTctctatccagatgtccaggctaaaccacagtactatgatgctatcctcaatggactggaggtgttcaagttgccgcttagtaatgggagccttgctgggctcaaccctgttccaactgttgagccatcgttggatggtggagcagtgaagaagtcaagtgttgggcctattgttggtggggtgattggaggtctggtggttcttgcacttggatattgctgctttatgatctgcaagcgtcggagcagagtggggaaggacacaggcatgagtgatgggcattctggatggttgccactttcactctatggcaactcacactcatctggctcagccaaatcacatactactgggagctacgcttcatcgctgccaTCCaacctgtgccgccatttctcatttgcggagatcaaggctgcaaCaaacaacttcgatgaatccctcctccttggtgtgggtggtttcggtaaagtgtatcgtggggagattgatggtggagtgaccaaggtggctatcaagcgtgggaatccactgtctgagcagggtgtgcatgagttccaaaccgagaTtgagatgctgtcgaagctccgccaccgtcatcttgtgtcactgattggttactgtgaggagaagaatgagatgatcctggtctatgactacatggctcatggaactcttcgtgagcacctgtacaagaccaagaatgcaccacttacatggaggcagcgcttggagatctgcattggtgctgcccgtgggcttcactaccttcacactggtgcgaagcacacaatcatccaccgtgatgtgaagacaacaaatatcctcctggatgagaagtgggtcgcgaaggtttcagattttggtctgtcaaagactgggccatcgatggatcacacacatgtgagcacagttgtcaagggaagttttggctaccttgaCcctgaatacttccgcaggcagcagctcactgagaaatctgatgtctactcctttggtgttgtgctatttgaggtcctctgtgctcgccctgccttgaaccccactcttgctaaggaagaagttagcttggcagagtgggccctgcactgccagaagaagggtattcttgatcagattgttgatccccacctgaagggaaagatcgctccacagtgcttcaagaagtttgccgagactgctgagaaatgtgtttcagatgaaggcatcgatcgtccttcaatgggagatgtgctgtggaacttggaatttgcccttcAaatgcaggaaagtgcagaggatagtggaagcattggttgtgggatgtcagatgagggcactCcccttgtgatgcctggaaagaaggatcccaatgatccatcgatcgagtcaagcaccactacaaccacaaccacgtccataagcatgggcgaccaaagtgttgctagcatagactccgacgggcttactcctagcgctgtcttctcacagatcatgaaccccaagggacggtgagctaacagtctttgcttgtcacctgcaggcattatttattctttaaacgtattctcatgagtttgtgatgttgattttctgtcaatttatggacctggaagtcagagagttgttccatattagatatttttgttttgtgctgtatattgtccatgctgtggtgacttggatacttattggctttgtattgtactctaccgctggtattaaccaccagttgatctctattactgtatacgaaagctatgcgcaagaccatcttcattttca
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| CDS seq | atgggaagctccagattcgtgctcttgctcctcctcctcctcgccgtggcggcttgcgtcgcgcgggggcaaggcggcggaaactcgagcagcgcggcggcgccggcgccggctgcgggggcggggccgttcgtgccgcgggacgacatcctgctcgactgcggcgcgacggggaaggggaacgacacggacgggcgggtgtggagcggggacgccgggtccaagtacgcgccggcgagcctcggctcggcgtccgccgcggggcaggaCccctcggtgccgcaggtgccctacctcaccgcgagggtctccgcggcgcccttcacctactccttcccgctcggcgccggccgcaagttcctcaggctccacttctacccggccaactactccagccgcgacgccgccgacgcgcgcttctccgtctccgtccccgccgccaacgtcacactcctctccaacttcagcgcctaccagaccgccaccgccctcaacttcgcctacatcgtccgcgagttctccgtcaacgtcacgaccccgacgatggagctcaccttcacgccggagaagggccaccccaacgcctacgcgttcgtcaacggcatcgaggttgtctcctcccccgatctcttcgacatctCCAccccgaacctggtcaccggggatggcaacaatcagccattcccgatcgacgctggcactgctctgcagacaatgtaccgacttaatgtcggcggccaggcgatctccccctccaaggacacgggcggttaccgttcgtgggacaatgactcgccatacgtttttggtgcggcgttcggggtgtcctacccaaaagatgacaatgtcaccattgcctaccctagcaatgtgccggagtatgtggcgccagtggatgtctatgctacggcaaggtcgatggggccggacaagaacgtgaacttggcatacaacctcacttggataatgcaggtggatgctgggttcacataccttgtgaggcttcatttctgtgagatacaatatccaatcactatgatcaatcagcgggtgttcaacaTttacatcaacaaccagactgcttttcagggcgccgatgtgattgcgtggactaataacaatgggatcggcagtccagtgtatcaagactttgtagtgacaacagttggttcaggggctatggatttgtgggtagCTctctatccagatgtccaggctaaaccacagtactatgatgctatcctcaatggactggaggtgttcaagttgccgcttagtaatgggagccttgctgggctcaaccctgttccaactgttgagccatcgttggatggtggagcagtgaagaagtcaagtgttgggcctattgttggtggggtgattggaggtctggtggttcttgcacttggatattgctgctttatgatctgcaagcgtcggagcagagtggggaaggacacaggcatgagtgatgggcattctggatggttgccactttcactctatggcaactcacactcatctggctcagccaaatcacatactactgggagctacgcttcatcgctgccaTCCaacctgtgccgccatttctcatttgcggagatcaaggctgcaaCaaacaacttcgatgaatccctcctccttggtgtgggtggtttcggtaaagtgtatcgtggggagattgatggtggagtgaccaaggtggctatcaagcgtgggaatccactgtctgagcagggtgtgcatgagttccaaaccgagaTtgagatgctgtcgaagctccgccaccgtcatcttgtgtcactgattggttactgtgaggagaagaatgagatgatcctggtctatgactacatggctcatggaactcttcgtgagcacctgtacaagaccaagaatgcaccacttacatggaggcagcgcttggagatctgcattggtgctgcccgtgggcttcactaccttcacactggtgcgaagcacacaatcatccaccgtgatgtgaagacaacaaatatcctcctggatgagaagtgggtcgcgaaggtttcagattttggtctgtcaaagactgggccatcgatggatcacacacatgtgagcacagttgtcaagggaagttttggctaccttgaCcctgaatacttccgcaggcagcagctcactgagaaatctgatgtctactcctttggtgttgtgctatttgaggtcctctgtgctcgccctgccttgaaccccactcttgctaaggaagaagttagcttggcagagtgggccctgcactgccagaagaagggtattcttgatcagattgttgatccccacctgaagggaaagatcgctccacagtgcttcaagaagtttgccgagactgctgagaaatgtgtttcagatgaaggcatcgatcgtccttcaatgggagatgtgctgtggaacttggaatttgcccttcAaatgcaggaaagtgcagaggatagtggaagcattggttgtgggatgtcagatgagggcactCcccttgtgatgcctggaaagaaggatcccaatgatccatcgatcgagtcaagcaccactacaaccacaaccacgtccataagcatgggcgaccaaagtgttgctagcatagactccgacgggcttactcctagcgctgtcttctcacagatcatgaaccccaagggacggtga
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| Protein seq | MGSSRFVLLLLLLLAVAACVARGQGGGNSSSAAAPAPAAGAGPFVPRDDILLDCGATGKGNDTDGRVWSGDAGSKYAPASLGSASAAGQDPSVPQVPYLTARVSAAPFTYSFPLGAGRKFLRLHFYPANYSSRDAADARFSVSVPAANVTLLSNFSAYQTATALNFAYIVREFSVNVTTPTMELTFTPEKGHPNAYAFVNGIEVVSSPDLFDISTPNLVTGDGNNQPFPIDAGTALQTMYRLNVGGQAISPSKDTGGYRSWDNDSPYVFGAAFGVSYPKDDNVTIAYPSNVPEYVAPVDVYATARSMGPDKNVNLAYNLTWIMQVDAGFTYLVRLHFCEIQYPITMINQRVFNIYINNQTAFQGADVIAWTNNNGIGSPVYQDFVVTTVGSGAMDLWVALYPDVQAKPQYYDAILNGLEVFKLPLSNGSLAGLNPVPTVEPSLDGGAVKKSSVGPIVGGVIGGLVVLALGYCCFMICKRRSRVGKDTGMSDGHSGWLPLSLYGNSHSSGSAKSHTTGSYASSLPSNLCRHFSFAEIKAATNNFDESLLLGVGGFGKVYRGEIDGGVTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEEKNEMILVYDYMAHGTLREHLYKTKNAPLTWRQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPSMDHTHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPALNPTLAKEEVSLAEWALHCQKKGILDQIVDPHLKGKIAPQCFKKFAETAEKCVSDEGIDRPSMGDVLWNLEFALQMQESAEDSGSIGCGMSDEGTPLVMPGKKDPNDPSIESSTTTTTTTSISMGDQSVASIDSDGLTPSAVFSQIMNPKGR |
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| Function | Receptor-like protein kinase FERONIA [UniProtKB/Swiss-Prot:Q9SCZ4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_01g0034300 | OsNaBo_01g0034300.01 | Chr01 | 32995965 | 32999152 | + | NAM | ||
| CDS seq | atgggaagctccagattcgtgctcttgctcctcctcctcctcgccgtggcggcttgcgtcgcgcgggggcaaggcggcggaaactcgagcagcgcggcggcgccggcgccggctgcgggggcggggccgttcgtgccgcgggacgacatcctgctcgactgcggcgcgacggggaaggggaacgacacggacgggcgggtgtggagcggggacgccgggtccaagtacgcgccggcgagcctcggctcggcgtccgccgcggggcaggaCccctcggtgccgcaggtgccctacctcaccgcgagggtctccgcggcgcccttcacctactccttcccgctcggcgccggccgcaagttcctcaggctccacttctacccggccaactactccagccgcgacgccgccgacgcgcgcttctccgtctccgtccccgccgccaacgtcacactcctctccaacttcagcgcctaccagaccgccaccgccctcaacttcgcctacatcgtccgcgagttctccgtcaacgtcacgaccccgacgatggagctcaccttcacgccggagaagggccaccccaacgcctacgcgttcgtcaacggcatcgaggttgtctcctcccccgatctcttcgacatctCCAccccgaacctggtcaccggggatggcaacaatcagccattcccgatcgacgctggcactgctctgcagacaatgtaccgacttaatgtcggcggccaggcgatctccccctccaaggacacgggcggttaccgttcgtgggacaatgactcgccatacgtttttggtgcggcgttcggggtgtcctacccaaaagatgacaatgtcaccattgcctaccctagcaatgtgccggagtatgtggcgccagtggatgtctatgctacggcaaggtcgatggggccggacaagaacgtgaacttggcatacaacctcacttggataatgcaggtggatgctgggttcacataccttgtgaggcttcatttctgtgagatacaatatccaatcactatgatcaatcagcgggtgttcaacaTttacatcaacaaccagactgcttttcagggcgccgatgtgattgcgtggactaataacaatgggatcggcagtccagtgtatcaagactttgtagtgacaacagttggttcaggggctatggatttgtgggtagCTctctatccagatgtccaggctaaaccacagtactatgatgctatcctcaatggactggaggtgttcaagttgccgcttagtaatgggagccttgctgggctcaaccctgttccaactgttgagccatcgttggatggtggagcagtgaagaagtcaagtgttgggcctattgttggtggggtgattggaggtctggtggttcttgcacttggatattgctgctttatgatctgcaagcgtcggagcagagtggggaaggacacaggcatgagtgatgggcattctggatggttgccactttcactctatggcaactcacactcatctggctcagccaaatcacatactactgggagctacgcttcatcgctgccaTCCaacctgtgccgccatttctcatttgcggagatcaaggctgcaaCaaacaacttcgatgaatccctcctccttggtgtgggtggtttcggtaaagtgtatcgtggggagattgatggtggagtgaccaaggtggctatcaagcgtgggaatccactgtctgagcagggtgtgcatgagttccaaaccgagaTtgagatgctgtcgaagctccgccaccgtcatcttgtgtcactgattggttactgtgaggagaagaatgagatgatcctggtctatgactacatggctcatggaactcttcgtgagcacctgtacaagaccaagaatgcaccacttacatggaggcagcgcttggagatctgcattggtgctgcccgtgggcttcactaccttcacactggtgcgaagcacacaatcatccaccgtgatgtgaagacaacaaatatcctcctggatgagaagtgggtcgcgaaggtttcagattttggtctgtcaaagactgggccatcgatggatcacacacatgtgagcacagttgtcaagggaagttttggctaccttgaCcctgaatacttccgcaggcagcagctcactgagaaatctgatgtctactcctttggtgttgtgctatttgaggtcctctgtgctcgccctgccttgaaccccactcttgctaaggaagaagttagcttggcagagtgggccctgcactgccagaagaagggtattcttgatcagattgttgatccccacctgaagggaaagatcgctccacagtgcttcaagaagtttgccgagactgctgagaaatgtgtttcagatgaaggcatcgatcgtccttcaatgggagatgtgctgtggaacttggaatttgcccttcAaatgcaggaaagtgcagaggatagtggaagcattggttgtgggatgtcagatgagggcactCcccttgtgatgcctggaaagaaggatcccaatgatccatcgatcgagtcaagcaccactacaaccacaaccacgtccataagcatgggcgaccaaagtgttgctagcatagactccgacgggcttactcctagcgctgtcttctcacagatcatgaaccccaagggacggtga
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| Protein seq | MGSSRFVLLLLLLLAVAACVARGQGGGNSSSAAAPAPAAGAGPFVPRDDILLDCGATGKGNDTDGRVWSGDAGSKYAPASLGSASAAGQDPSVPQVPYLTARVSAAPFTYSFPLGAGRKFLRLHFYPANYSSRDAADARFSVSVPAANVTLLSNFSAYQTATALNFAYIVREFSVNVTTPTMELTFTPEKGHPNAYAFVNGIEVVSSPDLFDISTPNLVTGDGNNQPFPIDAGTALQTMYRLNVGGQAISPSKDTGGYRSWDNDSPYVFGAAFGVSYPKDDNVTIAYPSNVPEYVAPVDVYATARSMGPDKNVNLAYNLTWIMQVDAGFTYLVRLHFCEIQYPITMINQRVFNIYINNQTAFQGADVIAWTNNNGIGSPVYQDFVVTTVGSGAMDLWVALYPDVQAKPQYYDAILNGLEVFKLPLSNGSLAGLNPVPTVEPSLDGGAVKKSSVGPIVGGVIGGLVVLALGYCCFMICKRRSRVGKDTGMSDGHSGWLPLSLYGNSHSSGSAKSHTTGSYASSLPSNLCRHFSFAEIKAATNNFDESLLLGVGGFGKVYRGEIDGGVTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEEKNEMILVYDYMAHGTLREHLYKTKNAPLTWRQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPSMDHTHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPALNPTLAKEEVSLAEWALHCQKKGILDQIVDPHLKGKIAPQCFKKFAETAEKCVSDEGIDRPSMGDVLWNLEFALQMQESAEDSGSIGCGMSDEGTPLVMPGKKDPNDPSIESSTTTTTTTSISMGDQSVASIDSDGLTPSAVFSQIMNPKGR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.149073 | 21.888487 | 16.800919 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0769700 | RBH | 1.901929 | 3.593997 | 8.780955 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g56330 | RBH | 1.163511 | 2.017120 | 1.705325 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0769700 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0035090 | RBH | 0.044693 | 16.873024 | 11.236882 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0034620 | RBH | 0.322814 | 6.759194 | 5.647788 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0035020 | RBH | 0.386018 | 23.628847 | 11.808557 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0034360 | RBH | 0.075502 | 1.542884 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0034100 | RBH | 5.635807 | 51.176380 | 16.585117 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0538100 | RBH | 17.768158 | 21.5584785 | 20.8799495 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0033850 | RBH | 0.053481 | 3.849396 | 1.911392 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0534200 | RBH | 20.866644 | 6.0414415 | 40.8829405 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0033990 | RBH | 0.143239 | 0.372497 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0034050 | RBH | 0.041392 | 26.230326 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0034300 | RBH | 2.951512 | 16.821091 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0034360 | RBH | 0.978133 | 2.956742 | 2.017004 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0034200 | RBH | 0.074232 | 24.427515 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G034640 | RBH | 0.148002 | 15.850665 | 8.153482 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_05g0023060 | SBH | 1.463504 | 28.023397 | 7.025626 |
