Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_01g0028930 | OGI:01002250 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr01:28999594-29000335 | ||||||||
| Gene Symbol | WAK10, OsWAK10 | ||||||||||
| DNA seq | ATGGATCTTTTCCCCTGCTGCTTGTTCCTCCTCCTCGCCGCCGCTTGCTGCGGCGATCCTACCGGTGACACCTACGACACCGCCATGTGCGGCGCGCAAGCTTCCATCACCTGCGGCGGCGTCATCGTCCGGTACCCGTTCTACCTCTCCAACGCGACCAGGGCGCTCCCCATGTACGCCAACTCGTCCACGTTCTGCGGGTACCCGGGGCTGGTGATCATCTGCGGCGGCGGCGGCGGCGACAAGGCCGTCATGATGCTGGGCAACGACAGCTACACGGTGTCGCGCATTGACTACGCCAGCCTCACCGTCTCCCTCGCCGACGCCGACGTCGCCAACGGCACCTGCCCCGTAGTCAGCCATAACGTGACCATCCCGCCGGCACCCTCGTCGCTGCACCTGGCCGACACCGTCGGCATGCTCATCTTCTTCTTCCGCTGCGCCTTCTACCCGGCAGCCAATGCCCCACCCAAGCCGCCcgagcatccacccgctcacctgtggtcagagctccgaggatgatcccaggccgtcgttcctgcttccggcgagcatcctgccttccggtggcagctggtaccgcgggtgcgaggcggtgtacgacgttcccgttctcggcggctccgtcccgtccaacgcaaacgatcccgcgtggaggaaagacggctacatcgcgtcgctccgcaaggggttccagatgagctgggaccggagcgaccggtgCTcTCCCGGTGCGAGCTAA
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| CDS seq | ATGGATCTTTTCCCCTGCTGCTTGTTCCTCCTCCTCGCCGCCGCTTGCTGCGGCGATCCTACCGGTGACACCTACGACACCGCCATGTGCGGCGCGCAAGCTTCCATCACCTGCGGCGGCGTCATCGTCCGGTACCCGTTCTACCTCTCCAACGCGACCAGGGCGCTCCCCATGTACGCCAACTCGTCCACGTTCTGCGGGTACCCGGGGCTGGTGATCATCTGCGGCGGCGGCGGCGGCGACAAGGCCGTCATGATGCTGGGCAACGACAGCTACACGGTGTCGCGCATTGACTACGCCAGCCTCACCGTCTCCCTCGCCGACGCCGACGTCGCCAACGGCACCTGCCCCGTAGTCAGCCATAACGTGACCATCCCGCCGGCACCCTCGTCGCTGCACCTGGCCGACACCGTCGGCATGCTCATCTTCTTCTTCCGCTGCGCCTTCTACCCGGCAGCCAATGCCCCACCCAAGCCGCCcgagcatccacccgctcacctgtgctccgaggatgatcccaggccgtcgttcctgcttccggcgagcatcctgccttccggtggcagctggtaccgcgggtgcgaggcggtgtacgacgttcccgttctcggcggctccgtcccgtccaacgcaaacgatcccgcgtggaggaaagacggctacatcgcgtcgctccgcaaggggttccagatgagctgggaccggagcgaccggtgCTcTCCCGGTGCGAGCTAA
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| Protein seq | MDLFPCCLFLLLAAACCGDPTGDTYDTAMCGAQASITCGGVIVRYPFYLSNATRALPMYANSSTFCGYPGLVIICGGGGGDKAVMMLGNDSYTVSRIDYASLTVSLADADVANGTCPVVSHNVTIPPAPSSLHLADTVGMLIFFFRCAFYPAANAPPKPPEHPPAHLCSEDDPRPSFLLPASILPSGGSWYRGCEAVYDVPVLGGSVPSNANDPAWRKDGYIASLRKGFQMSWDRSDRCSPGAS |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_01g0028930 | OsNaBo_01g0028930.01 | Chr01 | 28999594 | 29000335 | + | NAM | ||
| CDS seq | ATGGATCTTTTCCCCTGCTGCTTGTTCCTCCTCCTCGCCGCCGCTTGCTGCGGCGATCCTACCGGTGACACCTACGACACCGCCATGTGCGGCGCGCAAGCTTCCATCACCTGCGGCGGCGTCATCGTCCGGTACCCGTTCTACCTCTCCAACGCGACCAGGGCGCTCCCCATGTACGCCAACTCGTCCACGTTCTGCGGGTACCCGGGGCTGGTGATCATCTGCGGCGGCGGCGGCGGCGACAAGGCCGTCATGATGCTGGGCAACGACAGCTACACGGTGTCGCGCATTGACTACGCCAGCCTCACCGTCTCCCTCGCCGACGCCGACGTCGCCAACGGCACCTGCCCCGTAGTCAGCCATAACGTGACCATCCCGCCGGCACCCTCGTCGCTGCACCTGGCCGACACCGTCGGCATGCTCATCTTCTTCTTCCGCTGCGCCTTCTACCCGGCAGCCAATGCCCCACCCAAGCCGCCcgagcatccacccgctcacctgtgctccgaggatgatcccaggccgtcgttcctgcttccggcgagcatcctgccttccggtggcagctggtaccgcgggtgcgaggcggtgtacgacgttcccgttctcggcggctccgtcccgtccaacgcaaacgatcccgcgtggaggaaagacggctacatcgcgtcgctccgcaaggggttccagatgagctgggaccggagcgaccggtgCTcTCCCGGTGCGAGCTAA
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| Protein seq | MDLFPCCLFLLLAAACCGDPTGDTYDTAMCGAQASITCGGVIVRYPFYLSNATRALPMYANSSTFCGYPGLVIICGGGGGDKAVMMLGNDSYTVSRIDYASLTVSLADADVANGTCPVVSHNVTIPPAPSSLHLADTVGMLIFFFRCAFYPAANAPPKPPEHPPAHLCSEDDPRPSFLLPASILPSGGSWYRGCEAVYDVPVLGGSVPSNANDPAWRKDGYIASLRKGFQMSWDRSDRCSPGAS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0689900 | RBH | 9.123680 | 8.472037 | 12.185399 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g49580 | SBH | 0.217670 | 0.211422 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0689900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0029790 | SBH | 0.000000 | 1.764930 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0029350 | RBH | 1.148990 | 5.791404 | 5.582739 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0029760 | SBH | 0.065632 | 0.0 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0028970 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0028640 | RBH | 22.398863 | 23.859785 | 62.261620 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0473000 | RBH | 7.9262455 | 23.30296 | 4.5420245 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0028380 | RBH | 1.547832 | 0.736422 | 3.185518 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0462100 | RBH | 7.9808155 | 28.5183305 | 2.645286 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0028670 | SBH | 0.224244 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0028550 | SBH | 0.736243 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0028820 | RBH | 12.274583 | 35.403732 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0029000 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0028810 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G029270 | SBH | 0.0 | 0.0 | 0.754148 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_05g0025750 | SBH | 0.0 | 0.0 | 0.196166 |
