Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_01g0028190 | OGI:01084670 | 5/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr01:28358279-28358742 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | atggcggtggccggcgagcggtggccagcggcgcttgaggcgaaggcactgcttcaggtctcgctgccgcagcatctgcttcagatcgatgctgaagagacgtctggcccatggagaacgaggtggacatcgtggggacggtgagttctctcagcaattcctaatgagattcttggtttcttgcaaaaattgtatacaatctatgattaattaaattctttctccttcttgattttatgccgtctgacttcgattgagttgagcacTCAtcttggcgtgcttctctactctcccttgcatggcggagatcatgtttatcatagtcaatcgatttggtaacatcggcaagaaattgtgatttgtttcatcacatctgtcgttgcctagtttatgacagtgagatggtgacaacagcaacgacgacctccatctttggctccgtcgctggatccggctcctactga
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| CDS seq | atggcggtggccggcgagcggtggccagcggcgcttgaggcgaaggcactgcttcaggtctcgctgccgcagcatctgcttcagatcgatgctgaagagacgtctggcccatggagaacgaggtggacatcgtggggacgtgagatggtgacaacagcaacgacgacctccatctttggctccgtcgctggatccggctcctactga |
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| Protein seq | MAVAGERWPAALEAKALLQVSLPQHLLQIDAEETSGPWRTRWTSWGREMVTTATTTSIFGSVAGSGSY |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_01g0028190 | OsNaBo_01g0028190.01 | Chr01 | 28358279 | 28358742 | + | NAM | ||
| CDS seq | atggcggtggccggcgagcggtggccagcggcgcttgaggcgaaggcactgcttcaggtctcgctgccgcagcatctgcttcagatcgatgctgaagagacgtctggcccatggagaacgaggtggacatcgtggggacgtgagatggtgacaacagcaacgacgacctccatctttggctccgtcgctggatccggctcctactga
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| Protein seq | MAVAGERWPAALEAKALLQVSLPQHLLQIDAEETSGPWRTRWTSWGREMVTTATTTSIFGSVAGSGSY |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0029020 | SBH | 0.790318 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0028610 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0029000 | SBH | 3.418253 | 0.0 | 0.229546 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0028230 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0017890 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_05G0343500 | SBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0027650 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0453000 | RBH | 0 | 0.057802 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0019190 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0027830 | SBH | 1.947519 | 1.091805 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0007610 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0028280 | SBH | 0.639927 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0028030 | SBH | 0.186150 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G028520 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0007580 | SBH | 0.0 | 0.0 | 1.819474 |
