Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_01g0015281 | OGI:01017470 | 6/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr01:13466226-13472301 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ctggaaagcatttcgtcgaacaccttgggcgcgtgctgcagcttcctctctgctctaccagcgcgacagcgaacttcgtcgttcctccttccctcggtaattcctcgctcccatgactcctcctagtcccctatgaactaaatccccTAtcaatttcgtcgattaggtccataacagtgccaagcccgagctcccaagctccgcccatggaggtcaccgcggacatgccatcccggggactctcccgccgtagatgctcacgcactcataaatttggtcggagaccatccctaccgccctaatccctagctacccgagctccggaccatggcgcttcttgtcttgccgccgtccatgcgtcgccgtgtgccgtagccgccggcggggattcgccagagtccctccacacctcccctggccacctccgagctgccctcgccgctccccgaccatgccccgccacgcgcagccatggctgccttgcctctcgcactggcgagaggtagaagacgactcctggccaagtcgctgacaggccgggcccactccctatttttctctagcAaaaaaaATAAGAGAAAATTCGATCCATAGCACAGGAAAAAACCCGGTACCAAAAAATAGCACAACAAATTTTCCACTTCGACTAAAAGCACAGGGCACCAATTTTCTTGTGATTCATAGCACTTCCGTCACATTTGCCATCCAAACATATGAGTTGACATGAAAAAAGATTCATTTGCCTTTCTTCCCTGAGCTAGCTCTCTTCTCCCTCGGTGATGTTGCCGCGCCTGTGTCGCCGACGCTCGGTGAGCTGACGGAGCCGCGCTTCCCTCCCTCCCACCCGCTCAGCTGCTCCCGATCGGCGCTCGCCACCACGCCTCCCACCGTTGCTTGCGCCAGATCCGCCACGCCGCCGAACGATTCACGCGTGTGGGCTGGAGCACCGGCCAGATCCGCATGGGAGGAAGGCGGTGGAGGAGAAGGTGGAGACGCTGCGCTTCCGGCCCGCCGGTTCCTGGCCGCCTACTCGTTGGTGGCAGCGCCGCCCAAGGTCACGGAGCCGACAAAGCCCGCCGCCCGCCCACTAGCAAATCATCCCAACGTCCGCCAGCGCgcgcgccacagccccgcctgcaggtcatcgtccccattgccgtcgtccccgtcgctgtcatcgtcgtcgtcgttgtcacgtggaagtagcggcaacccagcgcgctgcggcaccgtggcgagggagaggttgttctgcggcgccgagtacggccactacgggccacatccatccatgccgaagctagggcagcccacgtcatcgtcgtcatcctcgtcgtcaagctgccgccgacgcggaaggctcgccctcgatcagcagcgccgagtgccagacagggtccacctcaccatcggcggtgacggcgagccacgcgcccatgtcgttgaagagcgcgcgcgcagctcgctcggcggtggcggggaggcgaggcggtctctaggcaagtcgatggctgccgcgccgccgtccacgagggagcgaaagaggagacctggtggggaatgtggggaataatgaagggcaaatgtgTCtgacaaaaaatttctccactctaatctaacaccgttacttcaaaatatgacggaagtgctatagggcgaagAaaaatcggtggcctatgctatagatcgaaagtggaaacTttttgtgctattttttggtaccgctttcTttcatgtgctatggatcgaattttctcaaaaaataatgcggtggaaaagaaaaggaactccgggtaccacatgtcagccatagtggctgtggataggatttcggattaaaataaatcaattagaaacagtactgtttcccaattatcagaatcaatacaaatttgaatctttgaacaggcataactcactcattttaactcggatttgagtgaaacttgaacctaaaTttatataaattcacaagctttccaatggtatataatttactattcaatAaaatatatttataattattaaataattaatatcaaatgattagataagggataacctaaataatgtgttaataaatacaattgatattgtacagtagaatagatgtcaaataattatatttaacatgttttttcacagtgacaaccatgtaaattaagtataagtgatgtctcaaatgaatggatgtataggaaaatattagtacattttattaaTAAGtccaaatataaacaaacccatgacttataggctatttaaatctagtttagccatatAattaggtaaataaaatatgaatatacatagatcattcctaagcttgcttaggagaaataataacagagctagtgtgattagatcaccaatatgatatagcttatagtcgattgcctatattcaataaatggttcaatgttaatatactgttgcacacacatacccttttagataacctactagttgcatatAttaaactaggtaataaatgaagaaccagtatattagctaaatactagtgctagttataaattttagttatgtcttgccttgcgccttAAGatttcccgcggctttagcgtagccatctgggtccacgtcagctccttggatgctgataaaacttgctgtacggtctaacgtatgaatacgaaaagatagaaaataacttgtgccgatctcatgtagattgaatctttctcaagaccatgtctccgaccagaaacgtgcgtgatcgaacattgagattgtggtagcgtcgcaatccttgtaaataccgagctgactaaatcaaagtcgctatgcgagcttcctccagtcggttgagatcatcaactcggtcttcttcgtagtgctcctccttgaagttgcgaaatcgcaaggactcaaattctaccttacttggcaacattgcttccgcaccataaaccaaaaagaatggcgattgccccgtagcccgactgggtgtagtgcgcagagaccaaagtactgatggtagctgatcaacccacttgctggcgtagggacacagtcggtcaaaaactcgtgctttgatgccttgaagtaccataccattggcgcgttcaacctatccattgctcatgggatgcgctacagaggcataacaaattttgatgccaaagtcttcacaaaagtctttaaatacaccaccagtgaactgagtacctgtcacgtcctaaaaatcttaaatttataaattgttgtttaattggaatttttagaaattaaattaaaagactacaagctaaaccctaattttctaggaaaattttcaacataaaaatgagctagataaaATtttattaaatactatgcttgcccctctaTtttctagaattttctgggaattatttgagcaagggaagtaTttttaataattgaaacatcaattcacaaattgttttattcAaaaaagttcaaaagttcccccttctttggtccttgggccgttttcggCccaacttccctccttctctctctcccgcgcgcggcccatgccggcccaagccgcccgcgcccgcgcccCTctctcgcggaggccgacaggtggggcccacctgtcggattcgtccccgacctccggccgccgccgccgagccgaaccctagccgccgtttcccgctccAaatccggccaaatccgactccgtcttctccgattgagttaggggttttgttcctctcgatctcctctttcttttcccccaagaatcaaagagaatcgttgcgatttggatccgaatcgaactcattttgatttatctctaaaaaccgagttcgttttcttcccgattcgattcctcccgtttgcggcttgatctcttcaatccgagctcATataTAAACCTTCCCCTTGATCTCCTCTTCCGTTTGCCCCATCTCCCGAGTCCTCCCGTGCCTCCTAGCGCCGTCGTGACGAGCTCCAAGTCCGCCGCCGCCGCCGGCCGTCTTCGGTCGTGTCGCGCCGCCGTCTCCGCTGTCGCCTTTGGTCGCCGCCACCGCCGTTAGGTGCGCCGTGGTGTGGAGAAGCTCGGCCGTCCCTCCGTTTCCGCCGCCGACCACCGGAGCACCCTCGTCGCCGTTGAGCCGAGCCGCCGCCGCCTTCCTTCTCGTCGCCGACCGCCGTCGTGCATCCTTTGACTACGTGGTGAGTACCAACGGGTTCGTCTCGTTGTCCTCTACGCGTAGGTGCCCTCCGTTTCCGCCGTCGACCCTCCAAACGCCGGCGAGCTCGTCGACCCGAGCCGGCCGCCGTTGGGTGATGTCAGCATGACGTCAACCCTAGGGCTGACGTCATCAGGGCTAGGGCTGACGTCATCTCTCTCTTTTTCCTTTTTTCCCGATTTTCAAATAGATTAAAACTTTGGAAAATCATAACTAAATAACCGTAGATCCGTTTTAGGTGGTTCAAGTTTCTAAATTCTTCTAAAATCAAGATCTACCTGTTAAAAATATCCACATGTACTGTTTATGCTTGTTTTTGTACTGTTTTGTTGATTTTGTTTATTTGCTTTAGTTTCCGACGTTCCGGAGGAGAGCGTTTCCGTTGAGGAAGGTTCCGAAGCGTTTGTGGAAGCCCAAGGCAAGTCACACAGATCCCAAACAACCCTTTGAGCATGTTGATCCCGTTTAAAGCTATTATTTTATTTCAACTATGCATTGTTTTCGAATGTCATCGGGTGGTGAACCTTTCCCAGTTAATTAATGGCCAAAGTTGACTTTATTTTCCTATGGATTATAATTTGATTAGCATGAACCTTATATATTGGTTTGGTTCAGCTAAATGCTATATATAGGTTTGCTTAGCCATGCTTAGAAACATTAGCTAATTAAAAAGGGGTTAAATATAAATTACATAATTATTATTGTTttataatggttatatttaatggtagctcacgatggtcaatcgtgttatgataattaattgataactaaaacctggataaggtgggttgtgagcatatggttttgatggttgtgctcatgacaattaaggaccggttcgcgagctactgttgtgaaacatttatcgtgccaaccacaagccagcgtgggcaacggctttttgtatagcatgattcattatagtgcgccagactgagaagtggcgagaagtccatgggggtcgctggggagtccataccttgttttaaagggggtgattatgatccaggaaaggtgcactgtggtgaattgtgttatgcgagggatattgtcacaattcctttccgagatacCGTGGTGGTATTGAGGCACATGGTGACATGATGTGGGGTTGTGTCTTGTGGGTACAGTGGTACACCTCTGATCAGAGTTTAAACTATTCGAATAGCCGTACCCGCGGTTATGGGTGAGTTGAGCAATGTTTTTCGTGATTAGTCTCACACTACTCATTAATGGTAATAATGTGGTAATTAATTTAGTTCCTGGTTTGGAATGGTTAATTCCTGGTTTGGAGGGTTAATTTGTTCAACTGGGGTTGGTTGTTCAAATATGGTTGGGCCTATGCAACATGGGTATGTTGTATGGTGTTATTTAATATTGATTAATTATACAACTGTTTTATTATTCTCTTAAATATTTATTAAATGCTGTTTCTGCAAATGAGCTATATTATGCCATCCTTTGTTATCCTGTGCACTTGCATATTTGCTGTGTGGCTTGTTGAGTATGTCATATGCTCATTCTTGCAATATTCATTCATCAGAAGAGGAGTACTTCAGTGAAGGTGATGATCTTGAGGATTAGGCTTGTTCTCGGTTAAGATGCCTGTGGAGTGGAGTTGCCATAGCTGTTCCGTCGTTTGTTATAGTTTTATTTTTCCGCTGCGTAGAATGTTTTTCTTTGTGAGGAACTATCCACCTCTGTAATATTTTATTAATTTCGAATATTCTATAGTTAAATATTTGTACTCTATTATCAATATTGTCATTGTGTGCCTCGGTTGATTCCTGGACGAGGGTTTAACACACATGTAAGCGTTTGGAATTTTGGATAGAAATTCCGGGCGTGACAGTACCATTGTCAGTGATAATTCGATTGGGTACCCT
More
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| CDS seq | ctggaaagcatttcgtcgaacaccttgggcgcgtgctgcagcttcctctctgctctaccagcgcgacagcgaacttcgtcgttcctccttccctcgTTTCCGACGTTCCGGAGGAGAGCGTTTCCGTTGAGGAAGGTTCCGAAGCGTTTGTGGAAGCCCAAGAAGAGGAGTACTTCAGTGAAGGTGATGATCTTGAGGATTAGGCTTGTTCTC |
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| Protein seq | LESISSNTLGACCSFLSALPARQRTSSFLLPSFPTFRRRAFPLRKVPKRLWKPKKRSTSVKVMILRIRLVL |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_01g0015281 | OsNaBo_01g0015281.02 | Chr01 | 13470800 | 13472172 | + | IsoSeq | ||
| CDS seq | ATGCCTGTGGAGTGGAGTTGCCATAGCTGTTCCGTCGTTTGTTATAGTTTTATTTTTCCGCTGCGTAGAATGTTTTTCTTTGTGAGGAACTATCCACCT |
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| Protein seq | MPVEWSCHSCSVVCYSFIFPLRRMFFFVRNYPP |
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_01g0015281 | OsNaBo_01g0015281.01 | Chr01 | 13466226 | 13472301 | + | IsoSeq | ||
| CDS seq | ctggaaagcatttcgtcgaacaccttgggcgcgtgctgcagcttcctctctgctctaccagcgcgacagcgaacttcgtcgttcctccttccctcgTTTCCGACGTTCCGGAGGAGAGCGTTTCCGTTGAGGAAGGTTCCGAAGCGTTTGTGGAAGCCCAAGAAGAGGAGTACTTCAGTGAAGGTGATGATCTTGAGGATTAGGCTTGTTCTC
More
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| Protein seq | LESISSNTLGACCSFLSALPARQRTSSFLLPSFPTFRRRAFPLRKVPKRLWKPKKRSTSVKVMILRIRLVL |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 2.648801 | 0.000000 | 1.756600 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0015931 | RBH | 3.369447 | 0.0 | 1.104063 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0086900 | RBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0208000 | RBH | 0 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0017261 | RBH | 0.000000 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G015511 | RBH | 0.629197 | 0.0 | 1.884990 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
