Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_01g0007810 | OGI:01020160 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr01:6285845-6289105 | ||||||||
| Gene Symbol | GELP6, OsGELP6 | ||||||||||
| DNA seq | cgtgagccttcaattatgtcgcccggaggccggaGCTCTGCCTCGCGTCCATGGCGTCGTCCCTACCTACGTACTGTAGCGCAGTTGTAACTGCGTATGCGAGTCGTGATATTTTACCGGAGTCGGGACGAACGCTCGTCGCGCGCTGCGCGCACGCACCTACCCCAGATTTGCCCTCGGCATTTACGCCCTCACCTACAATCTCAAGCGAGCCCGATTAATGCCCTCTTTATAGTCCCACCATTGCCGAGCTCATCCCAATGCAGAAACCATCCAGCGTGTAGTGTGTAGCGTGTAGTGTGTCGTCACGATGTCGCGCGCCATGGCGGCCTCCAGGCGGGTCTCGGTGTTCGTCGCCGCGTTGGTCTGCTGCTCACTCGTGCGGCTCTCCCGGTGCGGCGGCGGCGGCGGCGGGCAGAGGGCGCAGAACTACACCTCGATGTTCAGCTTCGGCGACTCGCTGACGGACACCGGCAACCTCGTCGTGTCCAGCCCGCTCTCCTTCAGCATCGTCGGCAAGTACCCCTACGGCATGACATACTTCCACCGCCCCACCGGCCGCTGCTCCGACGGCCGCCTCGTCGTCGACTTCCTCGGTGCGCGCCGCCGCCGCCCGCCCCAATGCCGTCGCATTTCTCTCTCTCTCTCTCTGCACATTTGATTttgacattatcgatcttgtcgtgttggcctcgcagcgcaagcgttcgggctgccgctgctgcagccgtacctgtcgcgcggcgaggacgtcacgcggggcgtcaacttcgccgtcggcggcgcgacggccatggatccgccgttcttcgaggagatcggcgcgtccgacaagctctggaccaacctgtcgctcagcgtccagctcggctggttcgagcagctcaagccctcactctgcagctcacccaaaggtctctctgcacatttctcattcctgcgatttggttcgaatcgtacgcgttgatactgattctgagactggattcttgacatttttctgtgctgaatcggagcagattgcaaggagttcttcagcaagtcactcttcctcgtcggggagattgggggaaacgactacaactacgccttcttcaagggcaagagcttggacgacgccaaatcctacgtccccaccgtcgccggcgccgtcgccgacgccaccgaagtgagcatctcttcactacaccaaacactgaaacaataatcacagaatgtacatccattctctcatcttgcaatggtggattttttttcaatttccagaggctgatcaaggcaggggcggtgcacctggtggtgcccgggaacctgccgatcggctgctcgtcagcgtacctgacgctgcacccgagcagcaacaggagcgactacgactccaccggctgcctcaagacgtacaacgacttcgcccagcaccacaacgccgtgctccaggacaagctccggctgcttcgccggagctacccggaggccaggatcatgtacgccgactactacggcgccgccatgtccttcgcccagaaccccaagcagttcggtgagtgagctctctcacacacacaaaaacctcactccaatttcacactcatttcgctgtcctagttaagctaagccagttgagctgatagccttagctgtccagttgaaattgaatgaatggacagagaggcaactgactgaactgttgtgcatttgcatcgctgatgctggaattgacagcgatagagattagaacggtagcaatcacgatggccccgccacgatctctcatcaatcatcttcgatatgggcgtgtagatacatttaggagcgtgtgagatgcagtgggagattgtcgggctctttcagaaaagattagaggatttgggactcctattggccactcttctttagggaaaagattacttctttgttgcactgaaaagctcagtgtcttcgtcatctcatctgaactaggataaaactacatggtcagtgaaagtgatacatggatCTtCtttagtcgttttgctttagaattttgagctatgtcattctcaggaaagacagtataggcactgatcatccgttgctgttaatcaggacaatactgaacctctgaggctctgcctatgtgtaactatttgctgatagctgattagtttctttgttagtgttggatcaggttctagaagtatgtactacatttgtttgacgtgtattaataagcattgatttcaagtcatgtgacatgcttaagcctaactgttactccataatagtaGtaTttagtactccaccatgttcaccaactcccagcgatatactcctactaggtgtcatcaatagcatgtcatgtcaatttatctggcgcccggcggttaccaggtttcggttggccggttaagctctcaccaatttggagctgaattatcattgcagtagcattggcagctcagtgaacagtacatatgctctcaaggctagttcagtgttcacaatttcagaatgaaatctctgaaacttttggggtctaccaatgcatcctgaaattccggatgtgtctgaacttggcaaaataaatgttcaaattcagcagaacctgttccaaatttaacaatttccattcggaattcaccgaattttttccccgttccgaaaccgtgaacctgtgggttagctcaccgatgaactggagctgagctgtgtgggtggctgcactgtctgtctctgtgtccctgcagggttcaggcacgggGCgctgaggacgtgctgcggcggcggagggccgtacaacttcaacccgaaggcgagctgcggcgtgcggggctccagcgtgtgcacggacccgtcggcgtacgccaactgggacggcgtccacctgacggaggccggctaccacgccatcgccaacagcatcctcaatggcccttacaccagcccaaggctgctctgaccatcccccgttctctcgacctggtgttagctgctgctgctgctgctgcactctgcaatgtaaactgatctgtaatgtagtgatatgagctagtggtggttttgagttttgacagtgtgtgggctttggctacttgagtctccaggcacagtacagtatgtctgtcgagtgtcatcagctttgggcgtgactgtgtccgtgctacttttgactttgcaagtactgaattatagtactcagcacaactgcacaaacctttctttcatgtgttacgtctggatttcacgagacgagttgaaatcaggcggtatatataTACgtct
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| CDS seq | ATGTCGCGCGCCATGGCGGCCTCCAGGCGGGTCTCGGTGTTCGTCGCCGCGTTGGTCTGCTGCTCACTCGTGCGGCTCTCCCGGTGCGGCGGCGGCGGCGGCGGGCAGAGGGCGCAGAACTACACCTCGATGTTCAGCTTCGGCGACTCGCTGACGGACACCGGCAACCTCGTCGTGTCCAGCCCGCTCTCCTTCAGCATCGTCGGCAAGTACCCCTACGGCATGACATACTTCCACCGCCCCACCGGCCGCTGCTCCGACGGCCGCCTCGTCGTCGACTTCCTCGcgcaagcgttcgggctgccgctgctgcagccgtacctgtcgcgcggcgaggacgtcacgcggggcgtcaacttcgccgtcggcggcgcgacggccatggatccgccgttcttcgaggagatcggcgcgtccgacaagctctggaccaacctgtcgctcagcgtccagctcggctggttcgagcagctcaagccctcactctgcagctcacccaaagattgcaaggagttcttcagcaagtcactcttcctcgtcggggagattgggggaaacgactacaactacgccttcttcaagggcaagagcttggacgacgccaaatcctacgtccccaccgtcgccggcgccgtcgccgacgccaccgaaaggctgatcaaggcaggggcggtgcacctggtggtgcccgggaacctgccgatcggctgctcgtcagcgtacctgacgctgcacccgagcagcaacaggagcgactacgactccaccggctgcctcaagacgtacaacgacttcgcccagcaccacaacgccgtgctccaggacaagctccggctgcttcgccggagctacccggaggccaggatcatgtacgccgactactacggcgccgccatgtccttcgcccagaaccccaagcagttcgggttcaggcacgggGCgctgaggacgtgctgcggcggcggagggccgtacaacttcaacccgaaggcgagctgcggcgtgcggggctccagcgtgtgcacggacccgtcggcgtacgccaactgggacggcgtccacctgacggaggccggctaccacgccatcgccaacagcatcctcaatggcccttacaccagcccaaggctgctctga
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| Protein seq | MSRAMAASRRVSVFVAALVCCSLVRLSRCGGGGGGQRAQNYTSMFSFGDSLTDTGNLVVSSPLSFSIVGKYPYGMTYFHRPTGRCSDGRLVVDFLAQAFGLPLLQPYLSRGEDVTRGVNFAVGGATAMDPPFFEEIGASDKLWTNLSLSVQLGWFEQLKPSLCSSPKDCKEFFSKSLFLVGEIGGNDYNYAFFKGKSLDDAKSYVPTVAGAVADATERLIKAGAVHLVVPGNLPIGCSSAYLTLHPSSNRSDYDSTGCLKTYNDFAQHHNAVLQDKLRLLRRSYPEARIMYADYYGAAMSFAQNPKQFGFRHGALRTCCGGGGPYNFNPKASCGVRGSSVCTDPSAYANWDGVHLTEAGYHAIANSILNGPYTSPRLL |
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| Function | GDSL esterase/lipase At5g45910 [UniProtKB/Swiss-Prot:Q9FJ45] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_01g0007810 | OsNaBo_01g0007810.01 | Chr01 | 6285845 | 6289105 | + | NAM | ||
| CDS seq | ATGTCGCGCGCCATGGCGGCCTCCAGGCGGGTCTCGGTGTTCGTCGCCGCGTTGGTCTGCTGCTCACTCGTGCGGCTCTCCCGGTGCGGCGGCGGCGGCGGCGGGCAGAGGGCGCAGAACTACACCTCGATGTTCAGCTTCGGCGACTCGCTGACGGACACCGGCAACCTCGTCGTGTCCAGCCCGCTCTCCTTCAGCATCGTCGGCAAGTACCCCTACGGCATGACATACTTCCACCGCCCCACCGGCCGCTGCTCCGACGGCCGCCTCGTCGTCGACTTCCTCGcgcaagcgttcgggctgccgctgctgcagccgtacctgtcgcgcggcgaggacgtcacgcggggcgtcaacttcgccgtcggcggcgcgacggccatggatccgccgttcttcgaggagatcggcgcgtccgacaagctctggaccaacctgtcgctcagcgtccagctcggctggttcgagcagctcaagccctcactctgcagctcacccaaagattgcaaggagttcttcagcaagtcactcttcctcgtcggggagattgggggaaacgactacaactacgccttcttcaagggcaagagcttggacgacgccaaatcctacgtccccaccgtcgccggcgccgtcgccgacgccaccgaaaggctgatcaaggcaggggcggtgcacctggtggtgcccgggaacctgccgatcggctgctcgtcagcgtacctgacgctgcacccgagcagcaacaggagcgactacgactccaccggctgcctcaagacgtacaacgacttcgcccagcaccacaacgccgtgctccaggacaagctccggctgcttcgccggagctacccggaggccaggatcatgtacgccgactactacggcgccgccatgtccttcgcccagaaccccaagcagttcgggttcaggcacgggGCgctgaggacgtgctgcggcggcggagggccgtacaacttcaacccgaaggcgagctgcggcgtgcggggctccagcgtgtgcacggacccgtcggcgtacgccaactgggacggcgtccacctgacggaggccggctaccacgccatcgccaacagcatcctcaatggcccttacaccagcccaaggctgctctga
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| Protein seq | MSRAMAASRRVSVFVAALVCCSLVRLSRCGGGGGGQRAQNYTSMFSFGDSLTDTGNLVVSSPLSFSIVGKYPYGMTYFHRPTGRCSDGRLVVDFLAQAFGLPLLQPYLSRGEDVTRGVNFAVGGATAMDPPFFEEIGASDKLWTNLSLSVQLGWFEQLKPSLCSSPKDCKEFFSKSLFLVGEIGGNDYNYAFFKGKSLDDAKSYVPTVAGAVADATERLIKAGAVHLVVPGNLPIGCSSAYLTLHPSSNRSDYDSTGCLKTYNDFAQHHNAVLQDKLRLLRRSYPEARIMYADYYGAAMSFAQNPKQFGFRHGALRTCCGGGGPYNFNPKASCGVRGSSVCTDPSAYANWDGVHLTEAGYHAIANSILNGPYTSPRLL
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 1.552091 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0215700 | RBH | 0.0 | 0.0 | 3.844451 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g11710 | RBH | 0.0 | 0.0 | 0.863322 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0215700 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0008330 | RBH | 0.0 | 0.000000 | 1.151015 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0007970 | RBH | 0.0 | 0.0 | 1.533484 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0008350 | RBH | 0.0 | 0.0 | 3.206816 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0007870 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0007970 | RBH | 0.0 | 0.000000 | 7.544476 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0103000 | RBH | 7.715966 | 0.8588095 | 16.8813165 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0007910 | RBH | 0.0 | 0.090620 | 0.208890 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0103500 | RBH | 7.843285 | 0.0274525 | 64.2151585 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0009430 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0007960 | RBH | 0.0 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0007960 | RBH | 0.0 | 3.565354 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0007970 | RBH | 0.0 | 0.0 | 0.293540 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0007860 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G007970 | RBH | 0.0 | 0.0 | 3.931195 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0010680 | SBH | 2.088876 | 58.801044 | 27.025255 |
