Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_01g0007030 | OGI:01018460 | 8/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr01:5574312-5574473 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ctacgacgtgacgcgaagcgcgcactggaggacgacgtggagcgcgaccgcgccgaggccgtagacgaggagggcgagcaggacgatggcattggtgttgaacgacacggcgactggaccgccgccgccatggccgttctcggcggtatcggtcgtcgccat |
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| CDS seq | atggcgacgaccgataccgccgagaacggccatggcggcggcggtccagtcgccgtgtcgttcaacaccaatgccatcgtcctgctcgccctcctcgtctacggcctcggcgcggtcgcgctccacgtcgtcctccagtgcgcgcttcgcgtcacgtcgtag |
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| Protein seq | MATTDTAENGHGGGGPVAVSFNTNAIVLLALLVYGLGAVALHVVLQCALRVTS |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_01g0007030 | OsNaBo_01g0007030.01 | Chr01 | 5574312 | 5574473 | - | NAM | ||
| CDS seq | atggcgacgaccgataccgccgagaacggccatggcggcggcggtccagtcgccgtgtcgttcaacaccaatgccatcgtcctgctcgccctcctcgtctacggcctcggcgcggtcgcgctccacgtcgtcctccagtgcgcgcttcgcgtcacgtcgtag |
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| Protein seq | MATTDTAENGHGGGGPVAVSFNTNAIVLLALLVYGLGAVALHVVLQCALRVTS |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 1.700616 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g09270 | SBH | 0.695848 | 0.000000 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0007600 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0007240 | SBH | 0.0 | 0.0 | 1.701029 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0007570 | SBH | 0.0 | 0.0 | 3.016066 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0007090 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0006280 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0092800 | RBH | 0.048582 | 0.2819275 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0007160 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0093100 | RBH | 0.1293405 | 0.105722 | 0.1729215 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0007010 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0007200 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0007210 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0007220 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0006200 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G007220 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0006140 | SBH | 0.0 | 0.0 | 0.0 |
