Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsN22_12G002010 | OGI:12002630 | 16/16 | N22 | OsN22RS2 | Gramene(+IsoSeq) | Chr12:1423072-1425311 | ||||||||
| Gene Symbol | WRKY65, OsWRKY65 | ||||||||||
| DNA seq | ATGGAGGAGGCCTACTGCATGATGATGGTGGGGAGGGAGAGGGAGCTCGTGGCTGAGCTGCGTCACCTCCTCTTCCCTTCTCCGTCTCCGACCACCCCCGCGAGCCACTCTACTACTGCGCTCACCGGCGACGACGAGTGCTTGCCGCCAGGGCTGACAACGACGACGACGGTGTCCGGTGGTGGAGGACGGCGGCGGGGGAGGAAGAGAGTCCGCCGCGACAATGATAATCTCAAGCTGCTTCAGGCAGATGATGATCAGGAGGTCCTAGCAGCAGCTGTTCATGGCGATGCAAATGCCAAGCCTCTTCCTAATTTCACCAAAACAAGGTGCTAATTAATATATCCATGCATCAAGCTTAATTAATTTCTAGGTGTCCATCAATAACAAGAACACTGCACACCGCACCTGCTTTCTTTTTTGTTATATTTCTGAAAGCAAATATAATCAATATAATGCACGAACGGTTCGGTTCATCATGGATTTAGAAATTTTGATTACATCTAGCTAGTTATGTATATGCAGCAGGAGGAAGCTGCAGACGACAACATCAACGATGGTAACGACGGTGCCAGATTTCGATGGGTATCAATGGAGGAAGTATGGTCAGAAGCAAATTGAAGGTGCCATGTACCCCAGGTACCATATCATTCCATATTTACATATGTATGTATTGTCACTACTGCTACATCAGTGTCATAAATCGCCACTGTTTAGCACTGTTGCTACAGTACTGCTACGTCAGAACACTGTAGCACAAGACAGATTACTGTGCGCCTCTACTTAGAACGAGCTAAGTCAGAGCAGCCGGTTCCGACTTGCAAGCATGCTCTGAGATGGAATCATTAATGTTATAAAATCAAGAAACTGCAGCCTTGAAACTCTCCCTATGCAAGAAATTAATGAGACCATCTATCTCAAAATAGGCTTGTTTAGTTCCCCCATAAACTTTTCCTAAAAACATCATATCAAATCTTTGGACACATATATTGAGTATTAAATATAGATAAAAAGAAAAACTAATTGCATTGTTTGCATGTAAAACGCGAGACGAATCTTTTGAGCCTAATTAGGCTATGATTAGCCATAAGTGCTACAGTAACCCACATGTGCTAATGACGGATTAATTAAGCTCAAAAGATTCGTCTCGCGGTTTCCAGGCGAGTTATAAAATTAGTTTTTTCATTCATGTCCCCGAAAACCCGTTCCGACATCTGGTCAAACGTTCGATGTGACACCTTATTTTATCAACTAAACAAGCCTCACGAGAGATCAGAAATTAAGCCTTTTTGGTTATGACGTGGCATGCGCAGACAATCGATCAGTCCTTTCACTCGGATACGCGTAACATATGCATGCAACCTTTGTGAATTGGTCGTACAGTACGTACGTGTAGGGCCCACAAGCCCATTACTAGGTGAATGATTAATTGCACGCATCGTCGCGCGATACACATTGTTGGGGTATGTTACAACAGATCCTACATATGTGTGATTGATTCCACTAGAATTAATTATCCACATATAAAAGCTGAAAAACTGAAGTGAAAAATGCAAGATCATATAGTAATTAGCTACTAGGTTGCAAGTTTGTAATGATATATGGATGTGTGACTAATTAATTACTGTAATTAACATAGATCGATGGACGCATGCAGGAGCTACTACCGGTGCACCAACAGCACAAACCAGGGCTGCCTCGCCAAAAAGACGGTGCAGCGCAATGGCGGCGGCGGAGCAGCAGGGTACACGGTGGCCTACATCTCAGAGCATACTTGCAAGTCCATCGAACCATCGCTGCCTCCGGTCATCCTCGACACCACCGTCCGTGCTACCAACAACCACCACCCGCCTGCAGCCTCTTCTTCTTGTGCTGCTCAATCACCGGCGGCGGCGGCGACATCGTCGTCGTCGGATATGATGATGACGAGTACTAGCAGTACTAGTAGCGAGACTGGTAATTGGAGCGGTCAGCACGGCGCCTACGCGTGCCGTCGACAGATGATCGCCGCCGATGAAGAGTACTGCTGCTGGGACACTCCGGCGACGACGACCACCTCTGGTTCTGATGGTGGTAACAGTAGTACTTGTGCCGATCAGGTGATAGACTTGATGAGCGGGCCCATCAGGTCGCCGCTGCACATCGCGGCGGACGGGAATTGGGTGGACGATTTGCTTCTTGTTGGTGATGGGCTTATCGACATATCCAGCGCTAACATCACCCATTTGTTCAGTTTCTAG
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| CDS seq | ATGGAGGAGGCCTACTGCATGATGATGGTGGGGAGGGAGAGGGAGCTCGTGGCTGAGCTGCGTCACCTCCTCTTCCCTTCTCCGTCTCCGACCACCCCCGCGAGCCACTCTACTACTGCGCTCACCGGCGACGACGAGTGCTTGCCGCCAGGGCTGACAACGACGACGACGGTGTCCGGTGGTGGAGGACGGCGGCGGGGGAGGAAGAGAGTCCGCCGCGACAATGATAATCTCAAGCTGCTTCAGGCAGATGATGATCAGGAGGTCCTAGCAGCAGCTGTTCATGGCGATGCAAATGCCAAGCCTCTTCCTAATTTCACCAAAACAAGCAGGAGGAAGCTGCAGACGACAACATCAACGATGGTAACGACGGTGCCAGATTTCGATGGGTATCAATGGAGGAAGTATGGTCAGAAGCAAATTGAAGGTGCCATGTACCCCAGGAGCTACTACCGGTGCACCAACAGCACAAACCAGGGCTGCCTCGCCAAAAAGACGGTGCAGCGCAATGGCGGCGGCGGAGCAGCAGGGTACACGGTGGCCTACATCTCAGAGCATACTTGCAAGTCCATCGAACCATCGCTGCCTCCGGTCATCCTCGACACCACCGTCCGTGCTACCAACAACCACCACCCGCCTGCAGCCTCTTCTTCTTGTGCTGCTCAATCACCGGCGGCGGCGGCGACATCGTCGTCGTCGGATATGATGATGACGAGTACTAGCAGTACTAGTAGCGAGACTGGTAATTGGAGCGGTCAGCACGGCGCCTACGCGTGCCGTCGACAGATGATCGCCGCCGATGAAGAGTACTGCTGCTGGGACACTCCGGCGACGACGACCACCTCTGGTTCTGATGGTGGTAACAGTAGTACTTGTGCCGATCAGGTGATAGACTTGATGAGCGGGCCCATCAGGTCGCCGCTGCACATCGCGGCGGACGGGAATTGGGTGGACGATTTGCTTCTTGTTGGTGATGGGCTTATCGACATATCCAGCGCTAACATCACCCATTTGTTCAGTTTCTAG
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| Protein seq | MEEAYCMMMVGRERELVAELRHLLFPSPSPTTPASHSTTALTGDDECLPPGLTTTTTVSGGGGRRRGRKRVRRDNDNLKLLQADDDQEVLAAAVHGDANAKPLPNFTKTSRRKLQTTTSTMVTTVPDFDGYQWRKYGQKQIEGAMYPRSYYRCTNSTNQGCLAKKTVQRNGGGGAAGYTVAYISEHTCKSIEPSLPPVILDTTVRATNNHHPPAASSSCAAQSPAAAATSSSSDMMMTSTSSTSSETGNWSGQHGAYACRRQMIAADEEYCCWDTPATTTTSGSDGGNSSTCADQVIDLMSGPIRSPLHIAADGNWVDDLLLVGDGLIDISSANITHLFSF |
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| Function | Probable WRKY transcription factor 53 [UniProtKB/Swiss-Prot:Q9SUP6] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsN22_12G002010 | OsN22_12G002010_01 | Chr12 | 1423072 | 1425311 | + | NAM | ||
| CDS seq | ATGGAGGAGGCCTACTGCATGATGATGGTGGGGAGGGAGAGGGAGCTCGTGGCTGAGCTGCGTCACCTCCTCTTCCCTTCTCCGTCTCCGACCACCCCCGCGAGCCACTCTACTACTGCGCTCACCGGCGACGACGAGTGCTTGCCGCCAGGGCTGACAACGACGACGACGGTGTCCGGTGGTGGAGGACGGCGGCGGGGGAGGAAGAGAGTCCGCCGCGACAATGATAATCTCAAGCTGCTTCAGGCAGATGATGATCAGGAGGTCCTAGCAGCAGCTGTTCATGGCGATGCAAATGCCAAGCCTCTTCCTAATTTCACCAAAACAAGCAGGAGGAAGCTGCAGACGACAACATCAACGATGGTAACGACGGTGCCAGATTTCGATGGGTATCAATGGAGGAAGTATGGTCAGAAGCAAATTGAAGGTGCCATGTACCCCAGGAGCTACTACCGGTGCACCAACAGCACAAACCAGGGCTGCCTCGCCAAAAAGACGGTGCAGCGCAATGGCGGCGGCGGAGCAGCAGGGTACACGGTGGCCTACATCTCAGAGCATACTTGCAAGTCCATCGAACCATCGCTGCCTCCGGTCATCCTCGACACCACCGTCCGTGCTACCAACAACCACCACCCGCCTGCAGCCTCTTCTTCTTGTGCTGCTCAATCACCGGCGGCGGCGGCGACATCGTCGTCGTCGGATATGATGATGACGAGTACTAGCAGTACTAGTAGCGAGACTGGTAATTGGAGCGGTCAGCACGGCGCCTACGCGTGCCGTCGACAGATGATCGCCGCCGATGAAGAGTACTGCTGCTGGGACACTCCGGCGACGACGACCACCTCTGGTTCTGATGGTGGTAACAGTAGTACTTGTGCCGATCAGGTGATAGACTTGATGAGCGGGCCCATCAGGTCGCCGCTGCACATCGCGGCGGACGGGAATTGGGTGGACGATTTGCTTCTTGTTGGTGATGGGCTTATCGACATATCCAGCGCTAACATCACCCATTTGTTCAGTTTCTAG
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| Protein seq | MEEAYCMMMVGRERELVAELRHLLFPSPSPTTPASHSTTALTGDDECLPPGLTTTTTVSGGGGRRRGRKRVRRDNDNLKLLQADDDQEVLAAAVHGDANAKPLPNFTKTSRRKLQTTTSTMVTTVPDFDGYQWRKYGQKQIEGAMYPRSYYRCTNSTNQGCLAKKTVQRNGGGGAAGYTVAYISEHTCKSIEPSLPPVILDTTVRATNNHHPPAASSSCAAQSPAAAATSSSSDMMMTSTSSTSSETGNWSGQHGAYACRRQMIAADEEYCCWDTPATTTTSGSDGGNSSTCADQVIDLMSGPIRSPLHIAADGNWVDDLLLVGDGLIDISSANITHLFSF
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.129160 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0117600 | SBH | 0.0 | 0.000000 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g02470 | RBH | 0.000000 | 0.790653 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os12g0116800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0001070 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_12g0001280 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_12g0001290 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_12g0001110 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0001320 | RBH | 0.000000 | 0.0 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0014800 | RBH | 2.2485215 | 0 | 0.0258085 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_12g0001300 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0015800 | RBH | 2.194722 | 0.0185385 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_12g0001090 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_12g0001360 | RBH | 0.000000 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0001330 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_12g0001210 | RBH | 0.0 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_12g0002100 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G001200 | RBH | 0.136690 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_12g0002230 | RBH | 0.0 | 0.0 | 0.0 |
