Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsN22_11G004050 | OGI:11008820 | 16/16 | N22 | OsN22RS2 | Gramene(+IsoSeq) | Chr11:2847808-2854362 | ||||||||
| Gene Symbol | DGD1D, OsDGD1delta, DGD1delta, OsDGD1D | ||||||||||
| DNA seq | GTTGATTCCGCGCATTAGCCACCCCACCTCTCCGCGTGGGCCCCGCCAAATCTCCTCTTCTCTTCTTCCACCGCCGCGGCGGCTTCGCTTCGCTTCCCAATCCTTCACATCCACCACCGCCTCCTCCTCCTCCCCGCACGCCTCGCCGTCGCCGGCGAAAACCCTAGCGGCGATCTCCTCGTACCCATGGCCAGCTACGGCGTCGACACGCGGCCGGCGGCCGCGGCGGCGGGAGGCGGGGGAGCGGGAGCGGGAGCGGCGGGGGAGGGGGCGCTGTCGTTCCTGTCGCGCGGCCTCCGGGAGGACCTGCGGCTGATCCGCGCGCGGGCGGGGGAGCTGGAGACGTTCCTGACCGCGCCGGTGCCGGAGCCGGAGCTGCTCGCGCGGCTCCGGCGCGCGTACTCGTCGTCGGCGGGGACCACGCGGCTGGACCTGTCGGCCATCGGGAAGGCGTTCGGGACGGGGGTGGTGGGGAGGGGGAGCAGGGGGGCGAGGTGGGGGTGGGAGGAGGTCCAGGAGGCCGAGGAGTGGGAGCCCATACGGATGGTCAAGGCGCGCCTCAGGGAGATGGAGCGGAGGCGGCAGTGGCAGGCCACCGACATGCTCCACAAGGTCAAGCTCAGCTTGGTGAGATTCCATACTTCCTGGAGACTTTACCGAACTCTTACTGATTGCCCCTGGAAGCAGGAATAACTTAAATTGAGTACGATGGTGAAAGGAATAATAATTGATATGGTTAGGTTCACTTTCGATGTGTGTTTCATTCCGGGATTTATTAGCCTGGTATTGGAGAAATTTTGTGGTTCTCTTGAGCTCCATATCGAATTTTATAGTACAGCCTGGGACAAAAAAGAAATATTGCAGGGTGATCAAGTTGAAATGGGGTCAACTGAAATGCTCAGGTTAATATGTGACAGGCTTGGGAAATATGAAACGGATCAAATTGGTCTTCTAGGGTAGCTTAGCTATTAGTTATTATGGTTCATAGCTGTACTTGTAGTTGAAAACTGGAGTATACAACCTCAACATGATGTTCAAATTGATCTCGGTAGCTATTCCCCAATATCTGCCCATCATATCAACATGATGCTCAAATTGATCTCGGTAGTGATTCCTCAATAGTCAATATTTTCCCATCATATCTTATAAAGATCAAAACTCTGGAAGAAATTAAGCGATAAGGGTGCTAGGCAAGTCTTAGGCATATTCCATGCCTTGTGATTTTTAGCTTTTCAGAGGTTGATTAATTCAAATTGAAAATTTTCTACAAAATGGGCTAGTGAAAAATTAGTACCGATTGGAACTGGAGGCTCAAATGTTAAACTGATGCTACACTCTGTAATGAGTTAATGGTACCTGAAAATCTAACCAACTCTCGTTTTCCATGTTTGGATTTATGGTTGCCTTTAGACTTAACAAAGAGTGCAAAGCCCACATGAATGAATTGTATTGATTCAAAAGGGAGTACATGGGGTGAAAAAAAGACCATGTTGAACACAGTAGCAATGGCCCCCAAGGCATATATGCAGAGTAGTGGGAGGTTTTGCTATGGAAAATAGAATATCTGAAGCTATATTTGTAACTTCTTGTTTACTGTGAATCTGTGATGTGAGTGAAGAATTTCAAATTTTACTTAGATGTATCAGCAATTGAAAAATAAACTTGTAGTTATCAAATATTGTTTCTGATTGCTTGCTTGTAAATGCACAGATCTTAATTAGGCTTATTCTTTACACGCTACAGCCTGCTCTAGTAACCTACGAATAGAACACATGTTTTTTTTTTTGACGCAAAAGGTAGAGAGACTCTACCTTGAATAGAACACATGTATGATCTCACTATATTGATGTACCATTCTGTTCTTTATTGCAGAAATCAATGAGCTTTGTACCTGAAGCATCTGAGGTAGTAATCTTGTTTCATATCCTCTTGCAATATGCATTCAAGAATGACCATTTTATACACATACTAGTGTTTGTTTGTCATTGTCAAGGAATTTACTTCTCCCAGTATGAATGCCTTGTAAAGTTGTAGTACAGACTAGCAAGGGTTTTTTTAATATGAAGGAATTAATTCTGCAAAATGTTGCCTTCAGTTCATTTCTGCTGTGTATGTACTACTAATTTTGGATGTGTAGAGTTCTGTTTGTTTCCAGAACGAAGACCATAGAACTGTTGTTTTGTATATCACTGTTCAGATATATTTGTATCATGTTACCTCATTAAATCTTTTGTCTAAATAAACTTGACCATCAAATTTTTTATAAAAAAATTTAACCATGCCACCTTGTGATCTTCAGAACATGGTTTCAACAGCATTGATATGTTGATAACACTGCGTGATTTATTCATTGCTTTAATCAGTACTGTTGTAATGTAGGAAGTTCCACCGCTAGATTTAGGTGAACTCCTGGCATATTTCCTAAAGCAATCTGGGCCATTGTTTGACCAACTTGGTATAAAAAGAGGTATGAAGTTTGACTTTATTTTTTTATTGCATTCTAGATCTTCAGAGATTTTATATTTTGAAGTTTGAGACTATGTTGAGCTGATTTTTCTTTGTCATATGCTATAGACGTGTGCGATAAGCTGGTGGAATCTCTGTGCAGCAAACGCAAGGACCACCTTGCATATAATTCATTTCCAGCAAGTGAACCATCCGCATTCAGCAATGACAATGCTGGTGATGAACTTGACCTAAGAATAGCTAGTGTCGTGCAAAGTACAGGACACAATTATGAAGGTGGATTTTGGAATGATGGGCATAAATATGAAACAGCTGACAAGAGGCATGTTGCGATAGTCACCACTGCCAGTCTTCCCTGGATGACTGGAACAGCTGTAAATCCTTTATTTCGAGCTGCTTACTTGGCTAAGTCTTCCAAGCAAGATGTAACCTTGGTGGTGCCTTGGCTTTGCAAGTCTGATCAAGAACTTGTGTATCCCAATAGCATGACATTTAGTTCTCCACAAGAACAAGAAGCTTATATGAGGAGTTGGCTGGAAGAAAGGGTTGGTTTCAAGACAGACTTCAAAATATCATTCTATCCTGGAAAGGTAAGGGTTCTCTTTTCATAACAAGTGAATAACCTTGCAACATTGTGTTCATTACTTGTCTAATATCAATTGTTTGCAAAGTATAGTTTCAAAAAGAACGGAGAAGCATAATTCCTGCGGGGGACACTTCACAATTTATACCATCAAAGGAAGCTGACATTGCTATTTTGGAAGAGCCTGAGCACCTGAACTGGTACCATCATGGGAAACGTTGGACTGATAAATTTAATCATGTTGTTGGTGTTGTGCATACAAATTATTTGGAGTACATTAAAAGGGAGAAGAATGGTGTTATTCAAGCCTTTTTTGTGAAGCACATCAACAATTTGGTTGCCAGAGCATATTGCCATAAGGTACTCAATTAAGTAGGGTCTGCAATGTTCAAGTGTGACAGTGTGAAGTTTCTATCATGTAGCTAACGCATAAGTATTCAAAAATTATGTAATTTAGTTGATTTTCCTTACTGAGCTGATGGTTGGTACAACGTAGGTTTTGCGACTGTCAGGAGCTACACAAGATCTCCCCAAGTCCATGATCTGCAATGTACATGGTGTCAATCCCAAGTTTCTTGAGGTTGGAGAGAGAATTGCAGCAGAGAGGGAATCTGGCCAGCATTCTTTCTCCAAAGGAGCTTATTTTCTAGGGAAGATGGTCTGGGCCAAAGGTTACAGAGAATTGATAGATTTGTATGCCAAACACAAGAGTGATTTGGAAGGCATCAAGTTGGACATCTATGGAAATGGTGAAGATTCACATGAGGTGCAATCAGCGGCTATGAAGTTGAACCTAAACCTTAACTTTCATAAAGGCCGGGATCATGCGGATGATTCTCTTCATGGGTAAAAGACAGAGCCTCTCACTGCCTGACATCTTCCTACATCTTTAGATATAGTTAATTTGAATGTTTTTCCTGTTTTTTTTTTCTTTCAGGTACAAGGTTTTTATAAATCCAAGCATTAGTGATGTCCTTTGCACTGCGACCGCTGAGGCATTAGCAATGGGTAAGTTTGTTGTCTGCGCAGACCACCCATCGAATGATTTTTTCAGGTCATTCCCGAACTGTTTGACATATAAAACATCGGAGGACTTTGTCGCGAAAGTGAAGGAAGCAATGGCACGCGATCCACAACCCCTCACACCTGAGCAGAGATACAACTTATCCTGGGAGGCCGCAACACAGAGATTCATGGAGCACTCCGAGCTGGACAAGGTCTTGAGCAGCAGCAACAGGGACTGCACCACCAGCACCAGTGGATGTGGTAAAAGTGGAGACAATAAGATGGAAAAATCAGCCTCGTTGCCGAACATGTCAGACATGGTAGATGGTGGGCTGGCCTTCGCCCACTACTGCTTCACTGGCAATGAGCTCCTCAGACTGTCAACCGGAGCAATACCCGGCACCCTCAATTACAACAAGCAACATAGCTTGGACCTCCACCTCTTGCCGCCTCAGGTACAGAACCCAGTATACGGCTGGTAAGATACTCCATATATACAATTAGTAGTAGTATTTCTCTCAGCACATAGATAGCTCTGTAATTTGTTTGTAACACTAGTTTTCGTTTTTCTTTTTGTCTACCATATGCCGAAGGCAATCTTGTTCATTATTATTGCAAACTACTACTACAGTACTACTACAAACTACATGTGTTAGATAGAAGTGCCATTTTCACTGGCCTTCATATTCATATTAAAGCAGAGTTGTTCAGATTTCAGAGTTTGAGTAGTGTCACCGGCATTGATCAAACCCTGCATGCGCATATCTCTGTCACAGCTAGTTACTAATCCATTCCATACCATACCAAAGTTGGCTGATGGTTGTTGCTGTTTGGTATTAGAAGTCCACGCCATGTCCTTTGTGCTTGCATGCACAAGATAAGTCCATCCAATCCATGGCAGTGCTGTGCCTGTGCCTGTGCGTGCGCTTGCTCCTTGCATGCGTGCACCACAATGGTGGTGGCACTGTCGCACTCATGAACTACTGCTCCTGGCTGCTGCTGCTTTTCTAGGCTCTACCTTACCTTTCTTTCTTTCCATCTATCTACTACTCCCTCCGTTCCAAAGAAAGACAAACCTTGATTTCCGTAATCAACGTTTGACTGTCCGTTTTATTTGAAAAAATTATGAAAAAAATTGAAAAGATAAGTCACACATAAAATATTAATCATGTTTTATCATCTAACAACAATGAAAATATGAATTATAAAAAAATTTTATATAAGACGGACAGTCAAAGTTGGACACGGAAACTCAGGGTTTGCCTTTTTTTTTTGGACGGAGGGAGTACTTGTATGTATGAGTACCATCATCGATGATCCATGACAGGCAAGAGAGCTTGGTATGCATGTATGTTTGTCTGGTCTACAATACATACAGCAAGCACACTGTTGTACTTGTACATGCTACTTGTATACTCTTGTAGAGAAGTTGTGGAGTAGCTGTTGTCTTGTAGAGAAGTATAGGGAGAGGCCAATGCTATGCCATGTCTTCTTTGTCCAGCAATCAGTACTAGTACTCCGTAGCACATGTGTTGGGTGGGGCCACACTGGCATTGCAATGGCAATGGCAATTGCAATGGCAGGTCTATGTGTGTGTGGGCCTTCCTTTGCCCTTCCTGCACTGCCAATCTGCCATTGCCAGCCTCAGCAGCTACAGCTAGTAGTAGTAGCAGTAGTGTAAGCACACTAGCAGTAGCACACTAGCACTGCAAGGGTCGTCGTGTTGATGTGTTGATGCGAGGCGATTCGTTGCAGTGCCTGCCTGCTGGCTGCTGCTGCTCTATGCCATGAGGAAGAGGACCATGTGTGCAGCTTGTGCTCTGCAGTGATGCAGCGATGTTGTGGTGCAACGCATTTCATCCATGTACTATACTGTGTTATTATCCTATGTGTGCTGGTGGGGCTCTCTCTGATTCCATCACATTACTGTGTAGCACTAGCTTAGCACTAATGCACTTTTGAGTAAGGATGCTAATGTCTATTGTGGCCCAGAGGGTTAGTAGCCCACATTTTTTTTCCTCTTTCATTTGCAGCAATGAGTGAACTGGCATTGTTGGTATCTTCTTCAATTCTTTCCTCTGCTCATCAATTTTGACACCAATGTTCCGTCTCTCTACTACGTACATGTCTGAAGAGTTTTTGTTCAGTGGAGTTGCATGTTTGATGGTACAATGTTTGTGTGAGTGAGGGGTGAGGAGGACAGGTCATGATAGAGGAGGCAGCCGCTACATGTTGTAGGAGGTGCAGTGGTAGTAACAATAAGTAGTTCCACCGGCCAATGGGGTGAAGAAGATGATGATGGGATGGGACGTTGTGTTTATCCTCCTCTCCTGTGTTCACTTCTTCAAGCGCTGTTGCTAGCTTTTCACACCCATGGGCTAACGTTGCCCCTTTTCACCGAGGCCGCCAAATTTGTCCGGACACCAACATGGGGATTTATGACCAGTTTGGAATCCAGGAGGAAATATTTGAGTAGAACTTTAATTGTTCTATGTAAAATT
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| CDS seq | ATGGCCAGCTACGGCGTCGACACGCGGCCGGCGGCCGCGGCGGCGGGAGGCGGGGGAGCGGGAGCGGGAGCGGCGGGGGAGGGGGCGCTGTCGTTCCTGTCGCGCGGCCTCCGGGAGGACCTGCGGCTGATCCGCGCGCGGGCGGGGGAGCTGGAGACGTTCCTGACCGCGCCGGTGCCGGAGCCGGAGCTGCTCGCGCGGCTCCGGCGCGCGTACTCGTCGTCGGCGGGGACCACGCGGCTGGACCTGTCGGCCATCGGGAAGGCGTTCGGGACGGGGGTGGTGGGGAGGGGGAGCAGGGGGGCGAGGTGGGGGTGGGAGGAGGTCCAGGAGGCCGAGGAGTGGGAGCCCATACGGATGGTCAAGGCGCGCCTCAGGGAGATGGAGCGGAGGCGGCAGTGGCAGGCCACCGACATGCTCCACAAGGTCAAGCTCAGCTTGAAATCAATGAGCTTTGTACCTGAAGCATCTGAGGAAGTTCCACCGCTAGATTTAGGTGAACTCCTGGCATATTTCCTAAAGCAATCTGGGCCATTGTTTGACCAACTTGGTATAAAAAGAGACGTGTGCGATAAGCTGGTGGAATCTCTGTGCAGCAAACGCAAGGACCACCTTGCATATAATTCATTTCCAGCAAGTGAACCATCCGCATTCAGCAATGACAATGCTGGTGATGAACTTGACCTAAGAATAGCTAGTGTCGTGCAAAGTACAGGACACAATTATGAAGGTGGATTTTGGAATGATGGGCATAAATATGAAACAGCTGACAAGAGGCATGTTGCGATAGTCACCACTGCCAGTCTTCCCTGGATGACTGGAACAGCTGTAAATCCTTTATTTCGAGCTGCTTACTTGGCTAAGTCTTCCAAGCAAGATGTAACCTTGGTGGTGCCTTGGCTTTGCAAGTCTGATCAAGAACTTGTGTATCCCAATAGCATGACATTTAGTTCTCCACAAGAACAAGAAGCTTATATGAGGAGTTGGCTGGAAGAAAGGGTTGGTTTCAAGACAGACTTCAAAATATCATTCTATCCTGGAAAGTTTCAAAAAGAACGGAGAAGCATAATTCCTGCGGGGGACACTTCACAATTTATACCATCAAAGGAAGCTGACATTGCTATTTTGGAAGAGCCTGAGCACCTGAACTGGTACCATCATGGGAAACGTTGGACTGATAAATTTAATCATGTTGTTGGTGTTGTGCATACAAATTATTTGGAGTACATTAAAAGGGAGAAGAATGGTGTTATTCAAGCCTTTTTTGTGAAGCACATCAACAATTTGGTTGCCAGAGCATATTGCCATAAGGTTTTGCGACTGTCAGGAGCTACACAAGATCTCCCCAAGTCCATGATCTGCAATGTACATGGTGTCAATCCCAAGTTTCTTGAGGTTGGAGAGAGAATTGCAGCAGAGAGGGAATCTGGCCAGCATTCTTTCTCCAAAGGAGCTTATTTTCTAGGGAAGATGGTCTGGGCCAAAGGTTACAGAGAATTGATAGATTTGTATGCCAAACACAAGAGTGATTTGGAAGGCATCAAGTTGGACATCTATGGAAATGGTGAAGATTCACATGAGGTGCAATCAGCGGCTATGAAGTTGAACCTAAACCTTAACTTTCATAAAGGCCGGGATCATGCGGATGATTCTCTTCATGGGTACAAGGTTTTTATAAATCCAAGCATTAGTGATGTCCTTTGCACTGCGACCGCTGAGGCATTAGCAATGGGTAAGTTTGTTGTCTGCGCAGACCACCCATCGAATGATTTTTTCAGGTCATTCCCGAACTGTTTGACATATAAAACATCGGAGGACTTTGTCGCGAAAGTGAAGGAAGCAATGGCACGCGATCCACAACCCCTCACACCTGAGCAGAGATACAACTTATCCTGGGAGGCCGCAACACAGAGATTCATGGAGCACTCCGAGCTGGACAAGGTCTTGAGCAGCAGCAACAGGGACTGCACCACCAGCACCAGTGGATGTGGTAAAAGTGGAGACAATAAGATGGAAAAATCAGCCTCGTTGCCGAACATGTCAGACATGGTAGATGGTGGGCTGGCCTTCGCCCACTACTGCTTCACTGGCAATGAGCTCCTCAGACTGTCAACCGGAGCAATACCCGGCACCCTCAATTACAACAAGCAACATAGCTTGGACCTCCACCTCTTGCCGCCTCAGGTACAGAACCCAGTATACGGCTGGTAA
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| Protein seq | MASYGVDTRPAAAAAGGGGAGAGAAGEGALSFLSRGLREDLRLIRARAGELETFLTAPVPEPELLARLRRAYSSSAGTTRLDLSAIGKAFGTGVVGRGSRGARWGWEEVQEAEEWEPIRMVKARLREMERRRQWQATDMLHKVKLSLKSMSFVPEASEEVPPLDLGELLAYFLKQSGPLFDQLGIKRDVCDKLVESLCSKRKDHLAYNSFPASEPSAFSNDNAGDELDLRIASVVQSTGHNYEGGFWNDGHKYETADKRHVAIVTTASLPWMTGTAVNPLFRAAYLAKSSKQDVTLVVPWLCKSDQELVYPNSMTFSSPQEQEAYMRSWLEERVGFKTDFKISFYPGKFQKERRSIIPAGDTSQFIPSKEADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNGVIQAFFVKHINNLVARAYCHKVLRLSGATQDLPKSMICNVHGVNPKFLEVGERIAAERESGQHSFSKGAYFLGKMVWAKGYRELIDLYAKHKSDLEGIKLDIYGNGEDSHEVQSAAMKLNLNLNFHKGRDHADDSLHGYKVFINPSISDVLCTATAEALAMGKFVVCADHPSNDFFRSFPNCLTYKTSEDFVAKVKEAMARDPQPLTPEQRYNLSWEAATQRFMEHSELDKVLSSSNRDCTTSTSGCGKSGDNKMEKSASLPNMSDMVDGGLAFAHYCFTGNELLRLSTGAIPGTLNYNKQHSLDLHLLPPQVQNPVYGW |
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| Function | Digalactosyldiacylglycerol synthase 1, chloroplastic [UniProtKB/Swiss-Prot:Q6DW74] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsN22_11G004050 | OsN22_11G004050_01 | Chr11 | 2847808 | 2854362 | + | NAM | ||
| CDS seq | ATGGCCAGCTACGGCGTCGACACGCGGCCGGCGGCCGCGGCGGCGGGAGGCGGGGGAGCGGGAGCGGGAGCGGCGGGGGAGGGGGCGCTGTCGTTCCTGTCGCGCGGCCTCCGGGAGGACCTGCGGCTGATCCGCGCGCGGGCGGGGGAGCTGGAGACGTTCCTGACCGCGCCGGTGCCGGAGCCGGAGCTGCTCGCGCGGCTCCGGCGCGCGTACTCGTCGTCGGCGGGGACCACGCGGCTGGACCTGTCGGCCATCGGGAAGGCGTTCGGGACGGGGGTGGTGGGGAGGGGGAGCAGGGGGGCGAGGTGGGGGTGGGAGGAGGTCCAGGAGGCCGAGGAGTGGGAGCCCATACGGATGGTCAAGGCGCGCCTCAGGGAGATGGAGCGGAGGCGGCAGTGGCAGGCCACCGACATGCTCCACAAGGTCAAGCTCAGCTTGAAATCAATGAGCTTTGTACCTGAAGCATCTGAGGAAGTTCCACCGCTAGATTTAGGTGAACTCCTGGCATATTTCCTAAAGCAATCTGGGCCATTGTTTGACCAACTTGGTATAAAAAGAGACGTGTGCGATAAGCTGGTGGAATCTCTGTGCAGCAAACGCAAGGACCACCTTGCATATAATTCATTTCCAGCAAGTGAACCATCCGCATTCAGCAATGACAATGCTGGTGATGAACTTGACCTAAGAATAGCTAGTGTCGTGCAAAGTACAGGACACAATTATGAAGGTGGATTTTGGAATGATGGGCATAAATATGAAACAGCTGACAAGAGGCATGTTGCGATAGTCACCACTGCCAGTCTTCCCTGGATGACTGGAACAGCTGTAAATCCTTTATTTCGAGCTGCTTACTTGGCTAAGTCTTCCAAGCAAGATGTAACCTTGGTGGTGCCTTGGCTTTGCAAGTCTGATCAAGAACTTGTGTATCCCAATAGCATGACATTTAGTTCTCCACAAGAACAAGAAGCTTATATGAGGAGTTGGCTGGAAGAAAGGGTTGGTTTCAAGACAGACTTCAAAATATCATTCTATCCTGGAAAGTTTCAAAAAGAACGGAGAAGCATAATTCCTGCGGGGGACACTTCACAATTTATACCATCAAAGGAAGCTGACATTGCTATTTTGGAAGAGCCTGAGCACCTGAACTGGTACCATCATGGGAAACGTTGGACTGATAAATTTAATCATGTTGTTGGTGTTGTGCATACAAATTATTTGGAGTACATTAAAAGGGAGAAGAATGGTGTTATTCAAGCCTTTTTTGTGAAGCACATCAACAATTTGGTTGCCAGAGCATATTGCCATAAGGTTTTGCGACTGTCAGGAGCTACACAAGATCTCCCCAAGTCCATGATCTGCAATGTACATGGTGTCAATCCCAAGTTTCTTGAGGTTGGAGAGAGAATTGCAGCAGAGAGGGAATCTGGCCAGCATTCTTTCTCCAAAGGAGCTTATTTTCTAGGGAAGATGGTCTGGGCCAAAGGTTACAGAGAATTGATAGATTTGTATGCCAAACACAAGAGTGATTTGGAAGGCATCAAGTTGGACATCTATGGAAATGGTGAAGATTCACATGAGGTGCAATCAGCGGCTATGAAGTTGAACCTAAACCTTAACTTTCATAAAGGCCGGGATCATGCGGATGATTCTCTTCATGGGTACAAGGTTTTTATAAATCCAAGCATTAGTGATGTCCTTTGCACTGCGACCGCTGAGGCATTAGCAATGGGTAAGTTTGTTGTCTGCGCAGACCACCCATCGAATGATTTTTTCAGGTCATTCCCGAACTGTTTGACATATAAAACATCGGAGGACTTTGTCGCGAAAGTGAAGGAAGCAATGGCACGCGATCCACAACCCCTCACACCTGAGCAGAGATACAACTTATCCTGGGAGGCCGCAACACAGAGATTCATGGAGCACTCCGAGCTGGACAAGGTCTTGAGCAGCAGCAACAGGGACTGCACCACCAGCACCAGTGGATGTGGTAAAAGTGGAGACAATAAGATGGAAAAATCAGCCTCGTTGCCGAACATGTCAGACATGGTAGATGGTGGGCTGGCCTTCGCCCACTACTGCTTCACTGGCAATGAGCTCCTCAGACTGTCAACCGGAGCAATACCCGGCACCCTCAATTACAACAAGCAACATAGCTTGGACCTCCACCTCTTGCCGCCTCAGCAATGA
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| Protein seq | MASYGVDTRPAAAAAGGGGAGAGAAGEGALSFLSRGLREDLRLIRARAGELETFLTAPVPEPELLARLRRAYSSSAGTTRLDLSAIGKAFGTGVVGRGSRGARWGWEEVQEAEEWEPIRMVKARLREMERRRQWQATDMLHKVKLSLKSMSFVPEASEEVPPLDLGELLAYFLKQSGPLFDQLGIKRDVCDKLVESLCSKRKDHLAYNSFPASEPSAFSNDNAGDELDLRIASVVQSTGHNYEGGFWNDGHKYETADKRHVAIVTTASLPWMTGTAVNPLFRAAYLAKSSKQDVTLVVPWLCKSDQELVYPNSMTFSSPQEQEAYMRSWLEERVGFKTDFKISFYPGKFQKERRSIIPAGDTSQFIPSKEADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNGVIQAFFVKHINNLVARAYCHKVLRLSGATQDLPKSMICNVHGVNPKFLEVGERIAAERESGQHSFSKGAYFLGKMVWAKGYRELIDLYAKHKSDLEGIKLDIYGNGEDSHEVQSAAMKLNLNLNFHKGRDHADDSLHGYKVFINPSISDVLCTATAEALAMGKFVVCADHPSNDFFRSFPNCLTYKTSEDFVAKVKEAMARDPQPLTPEQRYNLSWEAATQRFMEHSELDKVLSSSNRDCTTSTSGCGKSGDNKMEKSASLPNMSDMVDGGLAFAHYCFTGNELLRLSTGAIPGTLNYNKQHSLDLHLLPPQQ
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsN22_11G004050 | OsN22_11G004050_02 | Chr11 | 2847808 | 2852577 | + | NAM | ||
| CDS seq | ATGGCCAGCTACGGCGTCGACACGCGGCCGGCGGCCGCGGCGGCGGGAGGCGGGGGAGCGGGAGCGGGAGCGGCGGGGGAGGGGGCGCTGTCGTTCCTGTCGCGCGGCCTCCGGGAGGACCTGCGGCTGATCCGCGCGCGGGCGGGGGAGCTGGAGACGTTCCTGACCGCGCCGGTGCCGGAGCCGGAGCTGCTCGCGCGGCTCCGGCGCGCGTACTCGTCGTCGGCGGGGACCACGCGGCTGGACCTGTCGGCCATCGGGAAGGCGTTCGGGACGGGGGTGGTGGGGAGGGGGAGCAGGGGGGCGAGGTGGGGGTGGGAGGAGGTCCAGGAGGCCGAGGAGTGGGAGCCCATACGGATGGTCAAGGCGCGCCTCAGGGAGATGGAGCGGAGGCGGCAGTGGCAGGCCACCGACATGCTCCACAAGGTCAAGCTCAGCTTGAAATCAATGAGCTTTGTACCTGAAGCATCTGAGGAAGTTCCACCGCTAGATTTAGGTGAACTCCTGGCATATTTCCTAAAGCAATCTGGGCCATTGTTTGACCAACTTGGTATAAAAAGAGACGTGTGCGATAAGCTGGTGGAATCTCTGTGCAGCAAACGCAAGGACCACCTTGCATATAATTCATTTCCAGCAAGTGAACCATCCGCATTCAGCAATGACAATGCTGGTGATGAACTTGACCTAAGAATAGCTAGTGTCGTGCAAAGTACAGGACACAATTATGAAGGTGGATTTTGGAATGATGGGCATAAATATGAAACAGCTGACAAGAGGCATGTTGCGATAGTCACCACTGCCAGTCTTCCCTGGATGACTGGAACAGCTGTAAATCCTTTATTTCGAGCTGCTTACTTGGCTAAGTCTTCCAAGCAAGATGTAACCTTGGTGGTGCCTTGGCTTTGCAAGTCTGATCAAGAACTTGTGTATCCCAATAGCATGACATTTAGTTCTCCACAAGAACAAGAAGCTTATATGAGGAGTTGGCTGGAAGAAAGGGTTGGTTTCAAGACAGACTTCAAAATATCATTCTATCCTGGAAAGTTTCAAAAAGAACGGAGAAGCATAATTCCTGCGGGGGACACTTCACAATTTATACCATCAAAGGAAGCTGACATTGCTATTTTGGAAGAGCCTGAGCACCTGAACTGGTACCATCATGGGAAACGTTGGACTGATAAATTTAATCATGTTGTTGGTGTTGTGCATACAAATTATTTGGAGTACATTAAAAGGGAGAAGAATGGTGTTATTCAAGCCTTTTTTGTGAAGCACATCAACAATTTGGTTGCCAGAGCATATTGCCATAAGGTTTTGCGACTGTCAGGAGCTACACAAGATCTCCCCAAGTCCATGATCTGCAATGTACATGGTGTCAATCCCAAGTTTCTTGAGGTTGGAGAGAGAATTGCAGCAGAGAGGGAATCTGGCCAGCATTCTTTCTCCAAAGGAGCTTATTTTCTAGGGAAGATGGTCTGGGCCAAAGGTTACAGAGAATTGATAGATTTGTATGCCAAACACAAGAGTGATTTGGAAGGCATCAAGTTGGACATCTATGGAAATGGTGAAGATTCACATGAGGTGCAATCAGCGGCTATGAAGTTGAACCTAAACCTTAACTTTCATAAAGGCCGGGATCATGCGGATGATTCTCTTCATGGGTACAAGGTTTTTATAAATCCAAGCATTAGTGATGTCCTTTGCACTGCGACCGCTGAGGCATTAGCAATGGGTAAGTTTGTTGTCTGCGCAGACCACCCATCGAATGATTTTTTCAGGTCATTCCCGAACTGTTTGACATATAAAACATCGGAGGACTTTGTCGCGAAAGTGAAGGAAGCAATGGCACGCGATCCACAACCCCTCACACCTGAGCAGAGATACAACTTATCCTGGGAGGCCGCAACACAGAGATTCATGGAGCACTCCGAGCTGGACAAGGTCTTGAGCAGCAGCAACAGGGACTGCACCACCAGCACCAGTGGATGTGGTAAAAGTGGAGACAATAAGATGGAAAAATCAGCCTCGTTGCCGAACATGTCAGACATGGTAGATGGTGGGCTGGCCTTCGCCCACTACTGCTTCACTGGCAATGAGCTCCTCAGACTGTCAACCGGAGCAATACCCGGCACCCTCAATTACAACAAGCAACATAGCTTGGACCTCCACCTCTTGCCGCCTCAGGTACAGAACCCAGTATACGGCTGGTAA
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| Protein seq | MASYGVDTRPAAAAAGGGGAGAGAAGEGALSFLSRGLREDLRLIRARAGELETFLTAPVPEPELLARLRRAYSSSAGTTRLDLSAIGKAFGTGVVGRGSRGARWGWEEVQEAEEWEPIRMVKARLREMERRRQWQATDMLHKVKLSLKSMSFVPEASEEVPPLDLGELLAYFLKQSGPLFDQLGIKRDVCDKLVESLCSKRKDHLAYNSFPASEPSAFSNDNAGDELDLRIASVVQSTGHNYEGGFWNDGHKYETADKRHVAIVTTASLPWMTGTAVNPLFRAAYLAKSSKQDVTLVVPWLCKSDQELVYPNSMTFSSPQEQEAYMRSWLEERVGFKTDFKISFYPGKFQKERRSIIPAGDTSQFIPSKEADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNGVIQAFFVKHINNLVARAYCHKVLRLSGATQDLPKSMICNVHGVNPKFLEVGERIAAERESGQHSFSKGAYFLGKMVWAKGYRELIDLYAKHKSDLEGIKLDIYGNGEDSHEVQSAAMKLNLNLNFHKGRDHADDSLHGYKVFINPSISDVLCTATAEALAMGKFVVCADHPSNDFFRSFPNCLTYKTSEDFVAKVKEAMARDPQPLTPEQRYNLSWEAATQRFMEHSELDKVLSSSNRDCTTSTSGCGKSGDNKMEKSASLPNMSDMVDGGLAFAHYCFTGNELLRLSTGAIPGTLNYNKQHSLDLHLLPPQVQNPVYGW
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.320407 | 2.366399 | 2.288325 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0158400 | RBH | 2.058913 | 2.470902 | 6.901285 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g05990 | RBH | 1.075905 | 1.327304 | 1.459992 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0158400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0004060 | RBH | 0.064653 | 17.377180 | 6.482858 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0004140 | RBH | 0.342391 | 2.051031 | 2.978229 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0004060 | RBH | 0.296791 | 3.654486 | 9.389471 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0003990 | RBH | 0.023048 | 0.149285 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0003970 | RBH | 10.060431 | 1.312462 | 12.823733 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0050300 | RBH | 3.3414615 | 11.1211675 | 5.6112605 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0004060 | RBH | 0.226610 | 0.618107 | 1.034260 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0050600 | SBH | 12.2743545 | 15.714506 | 4.814307 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0003980 | RBH | 0.459179 | 0.207438 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0004060 | RBH | 0.716886 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0004060 | RBH | 4.029189 | 7.191885 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0003970 | RBH | 0.539648 | 0.0 | 3.207362 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0004080 | RBH | 0.335520 | 4.179280 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0004050 | RBH | 0.433888 | 30.708410 | 11.517381 |
