Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsN22_11G003530 | OGI:11007830 | 16/16 | N22 | OsN22RS2 | Gramene(+IsoSeq) | Chr11:2419539-2421402 | ||||||||
| Gene Symbol | CYP94C2, OsCYP94C2, CYP94C2a, OsCYP94C2a | ||||||||||
| DNA seq | TATTATGGTGTTTTCATATTAGTGACAACAACATACCATCTACTCCAGTTACCCAATTTTGTATGTTTTTTCTTTTGTTTTCGATTACCCGATTTGTGATTTCAACTAACAATGTCCAATTGCAGAATGATCACCATACAAGGAAACCATGACGAACACGAATCAATATCTGAATTTTCTGTTTTGTCTCATTAGAAACCCAAATTTCCCTACTAATTAATTTCTCCTATTTTTCTATGTACAAGCCTGTAATAACTTGTTTCAGTTTGTTGTTGCGGTAGAAGTGAAGTCTCCTAGCTGTCTAAGTGTGAACGCGGCGCCTGACTCTCACTTGGAGCCCGCCACTGATCGACGCGGTGAGCCCCGGCACGAACCGTGGCGCGGCGGCGGCGCCGCCGCTCCGGCCATTCTCGCCGACGACCTCGACGTCGAACGCCCTCACGACGGCGACGCTGGCCGCCTTCATCTCGGTGACGGCGAGCTCCTTGCCGAGGCACACGCGTTGGCCGGCCTGGAACACCGGGTACTTGTACGGGTTCGCCGGGACGAACGATGCGCCGGGGCCGGTGAGCCACCGCGCCGGCCGGAACGCGGCGTAGTCGGCGCCCCAGATGTGCGGCATCCGCCCCATGGCGTAGGGGTGGTACATGACGCGCGCGTCGCCGCCGACGTAGGTGCCGTCGGGGAGCACGTCGGCGGCGGCGCAGAACTTGGAGTCGAACTGCACCGGCGGGAACAGCCGCATGTTCTCGTGCAGCACGGCGTGGGTGTAGTGGAGGCCCTTGAGGTGCTCGTAGGTGATGGCGGCGCCCGTCTCGCCGCCGTCGCCGGCCTCCGCCTCCGCGCGCATGGCGGCGGCGACTTCGGGGTTCTTGGACAGGAGCATGAACAGCGTGGTGAGCGCGGTGGACACCGTGTCCCGCCCGGCGAGGAGGAAGCTGACGACGATGTCGCGGAGGAACTTGTCGTCCGCGGCGGCGTCGTCGACGCCGGTGGAGGCCATGAACCGCGACAGGAGGTCGTGGCTGCTGCCGACGCCCAGCTTCTGGCGCTCCCGGATCATCGCCGCCGCGAGCTCGTCGACGACCTTGATGGCCTTCCTGAGCTCCCTCTCCGACCCGACGTTGAGGAACCGCTTCGCCCTCCACAGCAACGGCGACGCCGCTGCGCCACGCATGGCGGAGAGGCGCGACGCGGCGTCGAACGCGTCGGCGAGCTCGGACACGGGCATTTCCCGGTCGAGGCAGCCGGGGTCGAGGCCGAAGGAGATCTTGCAGATGTTGTCGAAGGCGAAGCGGCGGAACACGTCCTGCAGATCGAGCACGGCGCCCCGGTCGGCGGCGTCGGCGAGCACCGGCATGAGGCGGGCCTCCACCTCCTGGGCGATGATCTTGTAGGCGTAGGAGCGCACGGCGACGCTGCCGAGCTCGAGGCTGGCCATCTTTCGCTGGTGGCGCCACGCGTGGCCGTCGACGTTGAAGATGCCGTCGCCGAGGAGGTCGCCGAGGAGCGCGGCGAAGGGCCTCCCCTTGGGGAAGTTGTCGAACCGCGTCCTGAGCATGTGCTCGACGTTCGCCGGGTTCGCCGTGACGGTGCAGCCGAGGACGTGGACGTGGACGGTGCCCGTCGGCGAGCGGCGGAGCAGGTGCGCGTACCAGTCGCCGAGGTTGGTGAACTCCCTCGCCCACGACCCCGTCAGGTAGGCGCGGCACACATGGCAGCTGCACCACGGCCACCGCCTCGCCACCAGGAGCACGACGCCGAGCGCCGCCAGGCACACCGAGAACGCGAAGAAGGCGAGCCCCGCGCACCGCGCGCCCCACGGCAACTCCATCTCCATGGACACGGTGGTGGTGGCATCCAT
More
|
||||||||||
| CDS seq | ATGGATGCCACCACCACCGTGTCCATGGAGATGGAGTTGCCGTGGGGCGCGCGGTGCGCGGGGCTCGCCTTCTTCGCGTTCTCGGTGTGCCTGGCGGCGCTCGGCGTCGTGCTCCTGGTGGCGAGGCGGTGGCCGTGGTGCAGCTGCCATGTGTGCCGCGCCTACCTGACGGGGTCGTGGGCGAGGGAGTTCACCAACCTCGGCGACTGGTACGCGCACCTGCTCCGCCGCTCGCCGACGGGCACCGTCCACGTCCACGTCCTCGGCTGCACCGTCACGGCGAACCCGGCGAACGTCGAGCACATGCTCAGGACGCGGTTCGACAACTTCCCCAAGGGGAGGCCCTTCGCCGCGCTCCTCGGCGACCTCCTCGGCGACGGCATCTTCAACGTCGACGGCCACGCGTGGCGCCACCAGCGAAAGATGGCCAGCCTCGAGCTCGGCAGCGTCGCCGTGCGCTCCTACGCCTACAAGATCATCGCCCAGGAGGTGGAGGCCCGCCTCATGCCGGTGCTCGCCGACGCCGCCGACCGGGGCGCCGTGCTCGATCTGCAGGACGTGTTCCGCCGCTTCGCCTTCGACAACATCTGCAAGATCTCCTTCGGCCTCGACCCCGGCTGCCTCGACCGGGAAATGCCCGTGTCCGAGCTCGCCGACGCGTTCGACGCCGCGTCGCGCCTCTCCGCCATGCGTGGCGCAGCGGCGTCGCCGTTGCTGTGGAGGGCGAAGCGGTTCCTCAACGTCGGGTCGGAGAGGGAGCTCAGGAAGGCCATCAAGGTCGTCGACGAGCTCGCGGCGGCGATGATCCGGGAGCGCCAGAAGCTGGGCGTCGGCAGCAGCCACGACCTCCTGTCGCGGTTCATGGCCTCCACCGGCGTCGACGACGCCGCCGCGGACGACAAGTTCCTCCGCGACATCGTCGTCAGCTTCCTCCTCGCCGGGCGGGACACGGTGTCCACCGCGCTCACCACGCTGTTCATGCTCCTGTCCAAGAACCCCGAAGTCGCCGCCGCCATGCGCGCGGAGGCGGAGGCCGGCGACGGCGGCGAGACGGGCGCCGCCATCACCTACGAGCACCTCAAGGGCCTCCACTACACCCACGCCGTGCTGCACGAGAACATGCGGCTGTTCCCGCCGGTGCAGTTCGACTCCAAGTTCTGCGCCGCCGCCGACGTGCTCCCCGACGGCACCTACGTCGGCGGCGACGCGCGCGTCATGTACCACCCCTACGCCATGGGGCGGATGCCGCACATCTGGGGCGCCGACTACGCCGCGTTCCGGCCGGCGCGGTGGCTCACCGGCCCCGGCGCATCGTTCGTCCCGGCGAACCCGTACAAGTACCCGGTGTTCCAGGCCGGCCAACGCGTGTGCCTCGGCAAGGAGCTCGCCGTCACCGAGATGAAGGCGGCCAGCGTCGCCGTCGTGAGGGCGTTCGACGTCGAGGTCGTCGGCGAGAATGGCCGGAGCGGCGGCGCCGCCGCCGCGCCACGGTTCGTGCCGGGGCTCACCGCGTCGATCAGTGGCGGGCTCCAAGTGAGAGTCAGGCGCCGCGTTCACACTTAG
More
|
||||||||||
| Protein seq | MDATTTVSMEMELPWGARCAGLAFFAFSVCLAALGVVLLVARRWPWCSCHVCRAYLTGSWAREFTNLGDWYAHLLRRSPTGTVHVHVLGCTVTANPANVEHMLRTRFDNFPKGRPFAALLGDLLGDGIFNVDGHAWRHQRKMASLELGSVAVRSYAYKIIAQEVEARLMPVLADAADRGAVLDLQDVFRRFAFDNICKISFGLDPGCLDREMPVSELADAFDAASRLSAMRGAAASPLLWRAKRFLNVGSERELRKAIKVVDELAAAMIRERQKLGVGSSHDLLSRFMASTGVDDAAADDKFLRDIVVSFLLAGRDTVSTALTTLFMLLSKNPEVAAAMRAEAEAGDGGETGAAITYEHLKGLHYTHAVLHENMRLFPPVQFDSKFCAAADVLPDGTYVGGDARVMYHPYAMGRMPHIWGADYAAFRPARWLTGPGASFVPANPYKYPVFQAGQRVCLGKELAVTEMKAASVAVVRAFDVEVVGENGRSGGAAAAPRFVPGLTASISGGLQVRVRRRVHT |
||||||||||
| Function | Cytochrome P450 94C1 [UniProtKB/Swiss-Prot:Q9ZUX1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsN22_11G003530 | OsN22_11G003530_01 | Chr11 | 2419539 | 2421402 | - | NAM | ||
| CDS seq | ATGGATGCCACCACCACCGTGTCCATGGAGATGGAGTTGCCGTGGGGCGCGCGGTGCGCGGGGCTCGCCTTCTTCGCGTTCTCGGTGTGCCTGGCGGCGCTCGGCGTCGTGCTCCTGGTGGCGAGGCGGTGGCCGTGGTGCAGCTGCCATGTGTGCCGCGCCTACCTGACGGGGTCGTGGGCGAGGGAGTTCACCAACCTCGGCGACTGGTACGCGCACCTGCTCCGCCGCTCGCCGACGGGCACCGTCCACGTCCACGTCCTCGGCTGCACCGTCACGGCGAACCCGGCGAACGTCGAGCACATGCTCAGGACGCGGTTCGACAACTTCCCCAAGGGGAGGCCCTTCGCCGCGCTCCTCGGCGACCTCCTCGGCGACGGCATCTTCAACGTCGACGGCCACGCGTGGCGCCACCAGCGAAAGATGGCCAGCCTCGAGCTCGGCAGCGTCGCCGTGCGCTCCTACGCCTACAAGATCATCGCCCAGGAGGTGGAGGCCCGCCTCATGCCGGTGCTCGCCGACGCCGCCGACCGGGGCGCCGTGCTCGATCTGCAGGACGTGTTCCGCCGCTTCGCCTTCGACAACATCTGCAAGATCTCCTTCGGCCTCGACCCCGGCTGCCTCGACCGGGAAATGCCCGTGTCCGAGCTCGCCGACGCGTTCGACGCCGCGTCGCGCCTCTCCGCCATGCGTGGCGCAGCGGCGTCGCCGTTGCTGTGGAGGGCGAAGCGGTTCCTCAACGTCGGGTCGGAGAGGGAGCTCAGGAAGGCCATCAAGGTCGTCGACGAGCTCGCGGCGGCGATGATCCGGGAGCGCCAGAAGCTGGGCGTCGGCAGCAGCCACGACCTCCTGTCGCGGTTCATGGCCTCCACCGGCGTCGACGACGCCGCCGCGGACGACAAGTTCCTCCGCGACATCGTCGTCAGCTTCCTCCTCGCCGGGCGGGACACGGTGTCCACCGCGCTCACCACGCTGTTCATGCTCCTGTCCAAGAACCCCGAAGTCGCCGCCGCCATGCGCGCGGAGGCGGAGGCCGGCGACGGCGGCGAGACGGGCGCCGCCATCACCTACGAGCACCTCAAGGGCCTCCACTACACCCACGCCGTGCTGCACGAGAACATGCGGCTGTTCCCGCCGGTGCAGTTCGACTCCAAGTTCTGCGCCGCCGCCGACGTGCTCCCCGACGGCACCTACGTCGGCGGCGACGCGCGCGTCATGTACCACCCCTACGCCATGGGGCGGATGCCGCACATCTGGGGCGCCGACTACGCCGCGTTCCGGCCGGCGCGGTGGCTCACCGGCCCCGGCGCATCGTTCGTCCCGGCGAACCCGTACAAGTACCCGGTGTTCCAGGCCGGCCAACGCGTGTGCCTCGGCAAGGAGCTCGCCGTCACCGAGATGAAGGCGGCCAGCGTCGCCGTCGTGAGGGCGTTCGACGTCGAGGTCGTCGGCGAGAATGGCCGGAGCGGCGGCGCCGCCGCCGCGCCACGGTTCGTGCCGGGGCTCACCGCGTCGATCAGTGGCGGGCTCCAAGTGAGAGTCAGGCGCCGCGTTCACACTTAG
More
|
|||||||
| Protein seq | MDATTTVSMEMELPWGARCAGLAFFAFSVCLAALGVVLLVARRWPWCSCHVCRAYLTGSWAREFTNLGDWYAHLLRRSPTGTVHVHVLGCTVTANPANVEHMLRTRFDNFPKGRPFAALLGDLLGDGIFNVDGHAWRHQRKMASLELGSVAVRSYAYKIIAQEVEARLMPVLADAADRGAVLDLQDVFRRFAFDNICKISFGLDPGCLDREMPVSELADAFDAASRLSAMRGAAASPLLWRAKRFLNVGSERELRKAIKVVDELAAAMIRERQKLGVGSSHDLLSRFMASTGVDDAAADDKFLRDIVVSFLLAGRDTVSTALTTLFMLLSKNPEVAAAMRAEAEAGDGGETGAAITYEHLKGLHYTHAVLHENMRLFPPVQFDSKFCAAADVLPDGTYVGGDARVMYHPYAMGRMPHIWGADYAAFRPARWLTGPGASFVPANPYKYPVFQAGQRVCLGKELAVTEMKAASVAVVRAFDVEVVGENGRSGGAAAAPRFVPGLTASISGGLQVRVRRRVHT
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0151400 | RBH | 0.130488 | 0.0 | 0.954676 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g05380 | RBH | 0.085946 | 0.0 | 0.239356 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0151400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0003540 | RBH | 0.0 | 0.684438 | 0.329737 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0003610 | RBH | 0.0 | 0.557270 | 0.499282 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0003510 | RBH | 0.0 | 0.0 | 0.688476 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0003460 | RBH | 0.0 | 0.031645 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0003440 | RBH | 0.0 | 0.0 | 0.587904 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0044200 | RBH | 3.346992 | 67.6177065 | 4.200391 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0003530 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0043800 | RBH | 2.0419645 | 19.8212385 | 0.068813 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0003420 | RBH | 0.038852 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0003530 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0003530 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0003470 | RBH | 0.0 | 0.0 | 0.242507 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0003540 | RBH | 0.0 | 0.635535 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_12G003440 | RBH | 0.0 | 0.538719 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0003520 | RBH | 0.0 | 0.0 | 1.262733 |
