Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsN22_11G002150 | OGI:11005280 | 15/16 | N22 | OsN22RS2 | Gramene(+IsoSeq) | Chr11:1544623-1547148 | ||||||||
| Gene Symbol | SDRLK-58 | ||||||||||
| DNA seq | TTAGGTAAATGCATGAGCTTCATCTTCAGCAGAAATGAGCATTTGCACTATGTACTTCATGCTTGGCCTCTTGTTTCTATCTTCTTCCAGGCATGAAATGGCCAATTTTATAACTAGCTGAGCCTGCAAATGATTAAATTCACCACCAAATTGATCATCAATTAAGTCCATAATCCATGATTCATCCTTGCTGTCCAGTTTGTCAACAACCATCTTAACCACGCTTCTCACATCAGTTTCTACTCCATCTTTCCCATCAACCACCCATTCTGTAATCCTCCTCCCTTTCACCAGCTCGAGAAGAACAACTCCATAACTATATACATCAACCTTCTCAGTGATCGGAAGGCTAGAAACCCACTCAGGAGCCATATATCCTCTCGTCCCCCGAATCCGTGACATTTCAGAACTAGACCCATCTCTGTTCAACAACTTGGACAAGCCAAAGTCAGTGATCTTAGGCTCCATATCTTCATCCAACAGTATGTTCTCGGGCTTCATGTCACAATGGATGATCCACTCTAGGCATTCATTGTGAAGATATGCCAACCCCTTGGCCACACCTAGAGCAATGTTGAACCTTTGCTTCCATCCAAGAAACTTGCTGGAATCTCTCCTATCAAATAGTACTTTGGCCAATGATCCATTCTCAATGTACTCATAGACTAAAATCCTATGTGTTCCTTCCGAGCAAAATCCCCACATTCTCACAAGATTCATATGATAAATCCTACCAATCACACTCAATTCAGCTTGGAAAACATCCTCACTCTGTCCCACATCTTGTAGCACCTTGACAGCCACCACCCTCTCATCGTCTAAACTCCCCTTGTATACTATACCTGATCCACCGTGACCGATCTTGTTGTTGAACTTTTTAGTTCCCCTCTCCAACTCCGAGTACCTATATGCGCGAAAATGGCTAGTAACAATCCTATACCCTTCTTCTAGTACCGAAACCTGGCTTGGCCTGAAAACTCCCTTGTTGGAAAAGATCCAGCATCCCATCGCGATCAGAAACACCTCAATGACAAAAATTGCAGAGAGGAATCCATAGAAGTAGAACCATATTGACTTGCCCTGATTATTGCTTGAGCTCGACGACATATCGGAGACATTGAGCAAGAACTCTGATGAGCTTGAGCCACTACATCCAGCAATGTCTTCCTCAATGGCAAGGCTGTGGCCATCGCCATGCGTCTGCCATTGGTGGACGTGCAACTCTGGCATGTCGAGATCAGCTGGGACCTTGAGATAGGCCGTGCCAAGATGGGCAGGGTGTGTTCTGCCATTGAACATGAGGCCCTTGGTGTAGCACTCTCCTGTGCCCTGCTTGTACTCGAACACCACGCACGACGGCTCGCTCATGCACCGTGCCGTGCACTCGTGCAGCGACAGGTGCGCGCTGCTGTTGATGTCGAAGCCCCAGAAGTCGGTGTGCGGCAGCGCCACCAGCTTCATCGCCGGCGGCCGGCCACCGCCGCCGCCGCCGTTGGTGTAGTTGAACGTCGGCTGGCAGCCTCTTGTCCAGTCGCTCGGGTCGGCGCGCGCGTACCCCGGCACGCAGACGCACACCGGCGCCGGCGAGTAGAGGCACACGGCGTTGGCGCCGCACACGCCGTGGATGACGCACGGGTTGACGAACGCCATCCACGACACCGACCATGTCCCGGCCGTCTCATCCAGGCTGTACAGCCTGAGGTTGCCGTCCGTGTCCAGCGTCAGCCTCCTGAACCTGACGCCGGCGTCCTCGCCGAGATCGGCGGCGTCGAAGGTCGCATTGTCGCTGGACAAGAAATGGCCGGAGGCGTCGAAGAAAGCTTCCCGGGTGAAGTTGTAGTAGATGTTGCGGTTGTTCTGCCAGTAGCTGTAGTACGGGTTGGGCCAGTAGATGCTGCTGGGCATCTTGTGGTTGTCGTACACCAGCGAGAGCATGGCGTAGTCGCTGAAGCGGAAGCTGTAGAAGCCGGCGGCGAGGAGCTTGCCTGCCGAGACCATCACCTCGCCGGCGGCGACGATGCGCTGGGTGGGAAGCAGGGTGTCGGTGGGGTGGTCGAAGCTCTGCCATAGGATGTTCCTGCTCGCGTCCTCGATGGCGAGGTTGCCGGAGTCGTGCAGCCGCGCGCGAGCGGCGGTGGCGTTGGCGACGGTTGAGTTCCATACCACCTCGCCGTCGTAGTCGGTGAGGACGAGCGCGCCGCGGCGGCCGTCGAGCGCGAGGCGGGAGCGCGCGCCGTGGACGGGGTGGCCGCGGTTGGCGGACCAGACGACGGCGCGGTCGGCGGCGCGCGCGAACCAGACGGAGAAGGTGAAGACGGTGGGCGAGACGCCGTAGAGGCCCGCGGCGAAGGTGCCGTCCGGGGAGAGCAAGAGGTCGGTGGCGTGGTCCTCGACGTCGATGGAGGCGCCCCGGGGGAGGCTGTCGCGGCGCGCCTCGCACGGGAAGGGACGCGACAGCGAGAGGAAGACGACGACGGCGGCGAGCAGCGGTACGGTGGCGGCGGCGCGGCTACAATTTTTGCTCAT
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| CDS seq | ATGAGCAAAAATTGTAGCCGCGCCGCCGCCACCGTACCGCTGCTCGCCGCCGTCGTCGTCTTCCTCTCGCTGTCGCGTCCCTTCCCGTGCGAGGCGCGCCGCGACAGCCTCCCCCGGGGCGCCTCCATCGACGTCGAGGACCACGCCACCGACCTCTTGCTCTCCCCGGACGGCACCTTCGCCGCGGGCCTCTACGGCGTCTCGCCCACCGTCTTCACCTTCTCCGTCTGGTTCGCGCGCGCCGCCGACCGCGCCGTCGTCTGGTCCGCCAACCGCGGCCACCCCGTCCACGGCGCGCGCTCCCGCCTCGCGCTCGACGGCCGCCGCGGCGCGCTCGTCCTCACCGACTACGACGGCGAGGTGGTATGGAACTCAACCGTCGCCAACGCCACCGCCGCTCGCGCGCGGCTGCACGACTCCGGCAACCTCGCCATCGAGGACGCGAGCAGGAACATCCTATGGCAGAGCTTCGACCACCCCACCGACACCCTGCTTCCCACCCAGCGCATCGTCGCCGCCGGCGAGGTGATGGTCTCGGCAGGCAAGCTCCTCGCCGCCGGCTTCTACAGCTTCCGCTTCAGCGACTACGCCATGCTCTCGCTGGTGTACGACAACCACAAGATGCCCAGCAGCATCTACTGGCCCAACCCGTACTACAGCTACTGGCAGAACAACCGCAACATCTACTACAACTTCACCCGGGAAGCTTTCTTCGACGCCTCCGGCCATTTCTTGTCCAGCGACAATGCGACCTTCGACGCCGCCGATCTCGGCGAGGACGCCGGCGTCAGGTTCAGGAGGCTGACGCTGGACACGGACGGCAACCTCAGGCTGTACAGCCTGGATGAGACGGCCGGGACATGGTCGGTGTCGTGGATGGCGTTCGTCAACCCGTGCGTCATCCACGGCGTGTGCGGCGCCAACGCCGTGTGCCTCTACTCGCCGGCGCCGGTGTGCGTCTGCGTGCCGGGGTACGCGCGCGCCGACCCGAGCGACTGGACAAGAGGCTGCCAGCCGACGTTCAACTACACCAACGGCGGCGGCGGCGGTGGCCGGCCGCCGGCGATGAAGCTGGTGGCGCTGCCGCACACCGACTTCTGGGGCTTCGACATCAACAGCAGCGCGCACCTGTCGCTGCACGAGTGCACGGCACGGTGCATGAGCGAGCCGTCGTGCGTGGTGTTCGAGTACAAGCAGGGCACAGGAGAGTGCTACACCAAGGGCCTCATGTTCAATGGCAGAACACACCCTGCCCATCTTGGCACGGCCTATCTCAAGGTCCCAGCTGATCTCGACATGCCAGAGTTGCACGTCCACCAATGGCAGACGCATGGCGATGGCCACAGCCTTGCCATTGAGGAAGACATTGCTGGATGTAGTGGCTCAAGCTCATCAGAGTTCTTGCTCAATGTCTCCGATATGTCGTCGAGCTCAAGCAATAATCAGGGCAAGTCAATATGGTTCTACTTCTATGGATTCCTCTCTGCAATTTTTGTCATTGAGGTGTTTCTGATCGCGATGGGATGCTGGATCTTTTCCAACAAGGGAGTTTTCAGGCCAAGCCAGGTTTCGGTACTAGAAGAAGGGTATAGGATTGTTACTAGCCATTTTCGCGCATATAGGTACTCGGAGTTGGAGAGGGGAACTAAAAAGTTCAACAACAAGATCGGTCACGGTGGATCAGGTATAGTATACAAGGGGAGTTTAGACGATGAGAGGGTGGTGGCTGTCAAGGTGCTACAAGATGTGGGACAGAGTGAGGATGTTTTCCAAGCTGAATTGAGTGTGATTGGTAGGATTTATCATATGAATCTTGTGAGAATGTGGGGATTTTGCTCGGAAGGAACACATAGGATTTTAGTCTATGAGTACATTGAGAATGGATCATTGGCCAAAGTACTATTTGATAGGAGAGATTCCAGCAAGTTTCTTGGATGGAAGCAAAGGTTCAACATTGCTCTAGGTGTGGCCAAGGGGTTGGCATATCTTCACAATGAATGCCTAGAGTGGATCATCCATTGTGACATGAAGCCCGAGAACATACTGTTGGATGAAGATATGGAGCCTAAGATCACTGACTTTGGCTTGTCCAAGTTGTTGAACAGAGATGGGTCTAGTTCTGAAATGTCACGGATTCGGGGGACGAGAGGATATATGGCTCCTGAGTGGGTTTCTAGCCTTCCGATCACTGAGAAGGTTGATGTATATAGTTATGGAGTTGTTCTTCTCGAGCTGGTGAAAGGGAGGAGGATTACAGAATGGGTGGTTGATGGGAAAGATGGAGTAGAAACTGATGTGAGAAGCGTGGTTAAGATGGTTGTTGACAAACTGGACAGCAAGGATGAATCATGGATTATGGACTTAATTGATGATCAATTTGGTGGTGAATTTAATCATTTGCAGGCTCAGCTAGTTATAAAATTGGCCATTTCATGCCTGGAAGAAGATAGAAACAAGAGGCCAAGCATGAAGTACATAGTGCAAATGCTCATTTCTGCTGAAGATGAAGCTCATGCATTTACCTAA
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| Protein seq | MSKNCSRAAATVPLLAAVVVFLSLSRPFPCEARRDSLPRGASIDVEDHATDLLLSPDGTFAAGLYGVSPTVFTFSVWFARAADRAVVWSANRGHPVHGARSRLALDGRRGALVLTDYDGEVVWNSTVANATAARARLHDSGNLAIEDASRNILWQSFDHPTDTLLPTQRIVAAGEVMVSAGKLLAAGFYSFRFSDYAMLSLVYDNHKMPSSIYWPNPYYSYWQNNRNIYYNFTREAFFDASGHFLSSDNATFDAADLGEDAGVRFRRLTLDTDGNLRLYSLDETAGTWSVSWMAFVNPCVIHGVCGANAVCLYSPAPVCVCVPGYARADPSDWTRGCQPTFNYTNGGGGGGRPPAMKLVALPHTDFWGFDINSSAHLSLHECTARCMSEPSCVVFEYKQGTGECYTKGLMFNGRTHPAHLGTAYLKVPADLDMPELHVHQWQTHGDGHSLAIEEDIAGCSGSSSSEFLLNVSDMSSSSSNNQGKSIWFYFYGFLSAIFVIEVFLIAMGCWIFSNKGVFRPSQVSVLEEGYRIVTSHFRAYRYSELERGTKKFNNKIGHGGSGIVYKGSLDDERVVAVKVLQDVGQSEDVFQAELSVIGRIYHMNLVRMWGFCSEGTHRILVYEYIENGSLAKVLFDRRDSSKFLGWKQRFNIALGVAKGLAYLHNECLEWIIHCDMKPENILLDEDMEPKITDFGLSKLLNRDGSSSEMSRIRGTRGYMAPEWVSSLPITEKVDVYSYGVVLLELVKGRRITEWVVDGKDGVETDVRSVVKMVVDKLDSKDESWIMDLIDDQFGGEFNHLQAQLVIKLAISCLEEDRNKRPSMKYIVQMLISAEDEAHAFT |
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| Function | Putative receptor protein kinase ZmPK1 [UniProtKB/Swiss-Prot:P17801] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsN22_11G002150 | OsN22_11G002150_01 | Chr11 | 1544623 | 1547148 | - | NAM | ||
| CDS seq | ATGAGCAAAAATTGTAGCCGCGCCGCCGCCACCGTACCGCTGCTCGCCGCCGTCGTCGTCTTCCTCTCGCTGTCGCGTCCCTTCCCGTGCGAGGCGCGCCGCGACAGCCTCCCCCGGGGCGCCTCCATCGACGTCGAGGACCACGCCACCGACCTCTTGCTCTCCCCGGACGGCACCTTCGCCGCGGGCCTCTACGGCGTCTCGCCCACCGTCTTCACCTTCTCCGTCTGGTTCGCGCGCGCCGCCGACCGCGCCGTCGTCTGGTCCGCCAACCGCGGCCACCCCGTCCACGGCGCGCGCTCCCGCCTCGCGCTCGACGGCCGCCGCGGCGCGCTCGTCCTCACCGACTACGACGGCGAGGTGGTATGGAACTCAACCGTCGCCAACGCCACCGCCGCTCGCGCGCGGCTGCACGACTCCGGCAACCTCGCCATCGAGGACGCGAGCAGGAACATCCTATGGCAGAGCTTCGACCACCCCACCGACACCCTGCTTCCCACCCAGCGCATCGTCGCCGCCGGCGAGGTGATGGTCTCGGCAGGCAAGCTCCTCGCCGCCGGCTTCTACAGCTTCCGCTTCAGCGACTACGCCATGCTCTCGCTGGTGTACGACAACCACAAGATGCCCAGCAGCATCTACTGGCCCAACCCGTACTACAGCTACTGGCAGAACAACCGCAACATCTACTACAACTTCACCCGGGAAGCTTTCTTCGACGCCTCCGGCCATTTCTTGTCCAGCGACAATGCGACCTTCGACGCCGCCGATCTCGGCGAGGACGCCGGCGTCAGGTTCAGGAGGCTGACGCTGGACACGGACGGCAACCTCAGGCTGTACAGCCTGGATGAGACGGCCGGGACATGGTCGGTGTCGTGGATGGCGTTCGTCAACCCGTGCGTCATCCACGGCGTGTGCGGCGCCAACGCCGTGTGCCTCTACTCGCCGGCGCCGGTGTGCGTCTGCGTGCCGGGGTACGCGCGCGCCGACCCGAGCGACTGGACAAGAGGCTGCCAGCCGACGTTCAACTACACCAACGGCGGCGGCGGCGGTGGCCGGCCGCCGGCGATGAAGCTGGTGGCGCTGCCGCACACCGACTTCTGGGGCTTCGACATCAACAGCAGCGCGCACCTGTCGCTGCACGAGTGCACGGCACGGTGCATGAGCGAGCCGTCGTGCGTGGTGTTCGAGTACAAGCAGGGCACAGGAGAGTGCTACACCAAGGGCCTCATGTTCAATGGCAGAACACACCCTGCCCATCTTGGCACGGCCTATCTCAAGGTCCCAGCTGATCTCGACATGCCAGAGTTGCACGTCCACCAATGGCAGACGCATGGCGATGGCCACAGCCTTGCCATTGAGGAAGACATTGCTGGATGTAGTGGCTCAAGCTCATCAGAGTTCTTGCTCAATGTCTCCGATATGTCGTCGAGCTCAAGCAATAATCAGGGCAAGTCAATATGGTTCTACTTCTATGGATTCCTCTCTGCAATTTTTGTCATTGAGGTGTTTCTGATCGCGATGGGATGCTGGATCTTTTCCAACAAGGGAGTTTTCAGGCCAAGCCAGGTTTCGGTACTAGAAGAAGGGTATAGGATTGTTACTAGCCATTTTCGCGCATATAGGTACTCGGAGTTGGAGAGGGGAACTAAAAAGTTCAACAACAAGATCGGTCACGGTGGATCAGGTATAGTATACAAGGGGAGTTTAGACGATGAGAGGGTGGTGGCTGTCAAGGTGCTACAAGATGTGGGACAGAGTGAGGATGTTTTCCAAGCTGAATTGAGTGTGATTGGTAGGATTTATCATATGAATCTTGTGAGAATGTGGGGATTTTGCTCGGAAGGAACACATAGGATTTTAGTCTATGAGTACATTGAGAATGGATCATTGGCCAAAGTACTATTTGATAGGAGAGATTCCAGCAAGTTTCTTGGATGGAAGCAAAGGTTCAACATTGCTCTAGGTGTGGCCAAGGGGTTGGCATATCTTCACAATGAATGCCTAGAGTGGATCATCCATTGTGACATGAAGCCCGAGAACATACTGTTGGATGAAGATATGGAGCCTAAGATCACTGACTTTGGCTTGTCCAAGTTGTTGAACAGAGATGGGTCTAGTTCTGAAATGTCACGGATTCGGGGGACGAGAGGATATATGGCTCCTGAGTGGGTTTCTAGCCTTCCGATCACTGAGAAGGTTGATGTATATAGTTATGGAGTTGTTCTTCTCGAGCTGGTGAAAGGGAGGAGGATTACAGAATGGGTGGTTGATGGGAAAGATGGAGTAGAAACTGATGTGAGAAGCGTGGTTAAGATGGTTGTTGACAAACTGGACAGCAAGGATGAATCATGGATTATGGACTTAATTGATGATCAATTTGGTGGTGAATTTAATCATTTGCAGGCTCAGCTAGTTATAAAATTGGCCATTTCATGCCTGGAAGAAGATAGAAACAAGAGGCCAAGCATGAAGTACATAGTGCAAATGCTCATTTCTGCTGAAGATGAAGCTCATGCATTTACCTAA
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| Protein seq | MSKNCSRAAATVPLLAAVVVFLSLSRPFPCEARRDSLPRGASIDVEDHATDLLLSPDGTFAAGLYGVSPTVFTFSVWFARAADRAVVWSANRGHPVHGARSRLALDGRRGALVLTDYDGEVVWNSTVANATAARARLHDSGNLAIEDASRNILWQSFDHPTDTLLPTQRIVAAGEVMVSAGKLLAAGFYSFRFSDYAMLSLVYDNHKMPSSIYWPNPYYSYWQNNRNIYYNFTREAFFDASGHFLSSDNATFDAADLGEDAGVRFRRLTLDTDGNLRLYSLDETAGTWSVSWMAFVNPCVIHGVCGANAVCLYSPAPVCVCVPGYARADPSDWTRGCQPTFNYTNGGGGGGRPPAMKLVALPHTDFWGFDINSSAHLSLHECTARCMSEPSCVVFEYKQGTGECYTKGLMFNGRTHPAHLGTAYLKVPADLDMPELHVHQWQTHGDGHSLAIEEDIAGCSGSSSSEFLLNVSDMSSSSSNNQGKSIWFYFYGFLSAIFVIEVFLIAMGCWIFSNKGVFRPSQVSVLEEGYRIVTSHFRAYRYSELERGTKKFNNKIGHGGSGIVYKGSLDDERVVAVKVLQDVGQSEDVFQAELSVIGRIYHMNLVRMWGFCSEGTHRILVYEYIENGSLAKVLFDRRDSSKFLGWKQRFNIALGVAKGLAYLHNECLEWIIHCDMKPENILLDEDMEPKITDFGLSKLLNRDGSSSEMSRIRGTRGYMAPEWVSSLPITEKVDVYSYGVVLLELVKGRRITEWVVDGKDGVETDVRSVVKMVVDKLDSKDESWIMDLIDDQFGGEFNHLQAQLVIKLAISCLEEDRNKRPSMKYIVQMLISAEDEAHAFT
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.097213 | 0.0 | 0.259091 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0133100 | RBH | 0.0 | 0.0 | 2.687419 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g03840 | RBH | 0.0 | 0.0 | 0.499438 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0133100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0002170 | RBH | 0.033900 | 1.032718 | 0.374384 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0002200 | RBH | 0.0 | 0.0 | 0.898636 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0002190 | RBH | 1.101931 | 0.0 | 1.878178 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0002180 | SBH | 0.0 | 0.040205 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0002130 | RBH | 0.332090 | 0.0 | 2.101868 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0030500 | RBH | 0.247303 | 0.6208405 | 0.031297 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0002160 | RBH | 0.0 | 0.0 | 0.083364 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0029200 | RBH | 0.2804035 | 0.652877 | 0.0870835 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0002060 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0002210 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0002200 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0002140 | RBH | 0.072488 | 0.0 | 0.059450 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0002210 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_12G002130 | RBH | 0.235437 | 0.0 | 0.148408 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0002120 | RBH | 0.188143 | 0.0 | 0.445522 |
