Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsN22_08G021010 | OGI:08071990 | 16/16 | N22 | OsN22RS2 | Gramene(+IsoSeq) | Chr08:26145489-26148095 | ||||||||
| Gene Symbol | RLCK257, OsRLCK257 | ||||||||||
| DNA seq | GTAAATTGGTAGCTTCGGAAGCGAGCGGCCACTTCCGTCGCAATGGCGGCAGCTGCGCGGGCGGCGGCGGTGGCGGTGGCGGTGGTGGTGGTGGTGCTCGGCGTGGAGGTTGCGGCTGCGCTGAACACGGACGGGCTGGCGCTTCTTGCGCTCAAGTTCGCGGTGTCGGAGGATCCCAATGGCGCGCTCTCGACGTGGAGGGACGCCGACAACGACCCCTGCGGCTGGTCGGGCGTCACCTGCGTCGACGGCGGTGGCGGCAGGGTCGCCGGCGTGGAGCTCGCCAACTTCTCGCTCGCGGGCTACCTCCCATCCGAGCTGTCGCTGCTGTCCGAGCTGGTGACGCTGTCCCTGCCCTACAACCAGCTCGCCGGCCAGATCCCGGTCGCCATCACGGCGCTGCAGAAGCTCGCGGCGCTCGACCTCGCCCACAACCTCCTCTCTGGCCAGGTTCCGGCTGGGATTGGGCGGCTCGTGTCGCTGTCCCGCCTCGATTTGTCCTCCAACCAGCTCAACGGCTCGCTGCCGCCGGCGATCGCCGGGCTTCCTCGTCTCTCTGGGGTTCTCAACCTGAGCTACAACCATTTCACCGGCGGGATCCCGCCGGAGTTCGGCGGCATTCCGGTGGCGGTGAGCCTTGACCTCCGCGGGAACGACCTCGCCGGCGAGATCCCGCAGGTGGGGTCCCTCGTCAACCAGGGCCCGACCGCCTTCGACGACAACCCGAGGCTCTGCGGGTTTCCGCTCAAGGTGGAGTGCGCCGGTGAGAAGGAAGATCCAAGAATCCCCGAGGCGAATGGTGGCATGAACCCCGGCGCGGCGGCGGCGGTCGGGAGGCCACCGAGGCGCCGGTCGTCGCCGACGGTGCCCGTTCTTGCTGCCATTGTGGTGGTTGCCATCGTCGCCGGGGTGATCCTGCAGTGGCAGTGCCGGCGGCGGTGCGCGGCGGCGACGGCGAGGGACGAGGAGAAGGAGTCGGCGAAGGATAAGAGCGGGGCGGTGACGCTGGCCGGCAGCGAGGAGCGGCGCAGCGGCGGGGAGGAAGGGGAGGTGTTCGTGGCGGTGGACGACGGGTTCGGGATGGAGCTGGAGGAGCTGCTCCGCGCGTCCGCGTTCGTCGTCGGGAAGAGCCGCGGCGGCATCGTGTACCGCGTCGTCCCGGGCCACGGCCCCGCCGTCGCCGTCCGCCGCCTCAGCGAGCCCGACGACGGCGACGGCGGCTCCGACTCCGGGTGGCGCCGGCGCCGCGCGTTCGAGACCGAGGCCGCCGCCATCGGCCGCGCGCGCCACCCCAACGTCGCGCGCCTCCGCGCCTACTACTACGCGCCCGACGAGAAGCTTCTCATCTACGACTACCTCTCCAATGGCTCCCTCCACTCCGCTCTCCACGGTGAGGCCACGAATCTGTTCTTGCCGATTCCTTCTTCTACTCCACTTGATCCGCAGCTAACGCGGTGTTTGTTTGTGTTTCAGGTGGCCCGACGGCGTCGCCGACGCCATTGCCGTGGTCGATGAGGCTGTCCATCGGGCAGGGCGCGGCGAGGGGGCTGGCATACCTGCACGAGTGCAGCCCACGCCGGTACGTGCACGGGTGCATCAAGTCATCCAAGATCCTGCTCGACGACGAGCTCCGCGCCCACGTCTCCGGCTTCGGCCTCGCCCGCCTCGTCGCCGGCGGCGCGCACAAGGCGGCGGCGGCGCAGTCGAAGAAGCTGGGCGGCGCGGCGTGCGCGCTGCGCGGCGGGGGCGGGGCGCTGGCGTACGTCGCGCCGGAGCTCCGCACGCCCGGCGGCGCGGCCGCCGCGGCGACGCAGAAGGGCGACGTGTTCGCGCTCGGCGTCGTGCTGCTGGAGGCGGTGACCGGGCGCGAGCCGACGGAGGGCGAGGGCGGGCTGGAGCTGGAGGCGTGGGTGCGCCGCGCCTTCAAGGAGGAGCGGCCGCTGTCGGAGGTGGTCGACCCGACGCTGCTCGGCGAGGTGCACGCCAAGAAGCAGGTGCTCGCCGTCTTCCATGTCGCCCTCGGCTGCACCGAGCCCGACGCCGAGCTGCGCCCCCGCATGCGCGCCGTCGCCGAGAGCCTCGACCGGATCAACGCCTAATCCGGTCATCTCTCCACCATCCTAATCGAGCTCAAAACACTACTACAAGCTAAAGCCTGTGTCACTTGCAGTAACCACCATTAGCTTACAAGAACTTCAAATTCTGTAGATTATTACTGTTAATCGCCGCCAATGCGAGGTTTGAGATGGCAAAACGAAGCAAGAATCATCAGGATCATTCGCTGATCTGCTCCAGTAGGCAGTAGTAGTGGACACTCTTCTTTAGCTGCATCATCGGCTGCAAGTCTGCAACCTCTGCAGAAGTGTAATCGATTGATCCCTTCCAAACAATTGTATCTGCCGTTTTCTTTTTCTCCTCTTGTGTTTTTGGCATCATGGCATGTCCTGTTTATGCTTTTGTGGCTGAAAAAAAAATTCTCCGCTTTCTTGGGGTCACAAGCTTGGATTGGAGAACGGCGAGCACAATGTTGTCATCTTCAGCTTTGGCACAGTTGACCCTGAAAAGATGCGACAATGACACTGACGAGAGCGTTGCATCCATTTAGCC
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| CDS seq | ATGGCGGCAGCTGCGCGGGCGGCGGCGGTGGCGGTGGCGGTGGTGGTGGTGGTGCTCGGCGTGGAGGTTGCGGCTGCGCTGAACACGGACGGGCTGGCGCTTCTTGCGCTCAAGTTCGCGGTGTCGGAGGATCCCAATGGCGCGCTCTCGACGTGGAGGGACGCCGACAACGACCCCTGCGGCTGGTCGGGCGTCACCTGCGTCGACGGCGGTGGCGGCAGGGTCGCCGGCGTGGAGCTCGCCAACTTCTCGCTCGCGGGCTACCTCCCATCCGAGCTGTCGCTGCTGTCCGAGCTGGTGACGCTGTCCCTGCCCTACAACCAGCTCGCCGGCCAGATCCCGGTCGCCATCACGGCGCTGCAGAAGCTCGCGGCGCTCGACCTCGCCCACAACCTCCTCTCTGGCCAGGTTCCGGCTGGGATTGGGCGGCTCGTGTCGCTGTCCCGCCTCGATTTGTCCTCCAACCAGCTCAACGGCTCGCTGCCGCCGGCGATCGCCGGGCTTCCTCGTCTCTCTGGGGTTCTCAACCTGAGCTACAACCATTTCACCGGCGGGATCCCGCCGGAGTTCGGCGGCATTCCGGTGGCGGTGAGCCTTGACCTCCGCGGGAACGACCTCGCCGGCGAGATCCCGCAGGTGGGGTCCCTCGTCAACCAGGGCCCGACCGCCTTCGACGACAACCCGAGGCTCTGCGGGTTTCCGCTCAAGGTGGAGTGCGCCGGTGAGAAGGAAGATCCAAGAATCCCCGAGGCGAATGGTGGCATGAACCCCGGCGCGGCGGCGGCGGTCGGGAGGCCACCGAGGCGCCGGTCGTCGCCGACGGTGCCCGTTCTTGCTGCCATTGTGGTGGTTGCCATCGTCGCCGGGGTGATCCTGCAGTGGCAGTGCCGGCGGCGGTGCGCGGCGGCGACGGCGAGGGACGAGGAGAAGGAGTCGGCGAAGGATAAGAGCGGGGCGGTGACGCTGGCCGGCAGCGAGGAGCGGCGCAGCGGCGGGGAGGAAGGGGAGGTGTTCGTGGCGGTGGACGACGGGTTCGGGATGGAGCTGGAGGAGCTGCTCCGCGCGTCCGCGTTCGTCGTCGGGAAGAGCCGCGGCGGCATCGTGTACCGCGTCGTCCCGGGCCACGGCCCCGCCGTCGCCGTCCGCCGCCTCAGCGAGCCCGACGACGGCGACGGCGGCTCCGACTCCGGGTGGCGCCGGCGCCGCGCGTTCGAGACCGAGGCCGCCGCCATCGGCCGCGCGCGCCACCCCAACGTCGCGCGCCTCCGCGCCTACTACTACGCGCCCGACGAGAAGCTTCTCATCTACGACTACCTCTCCAATGGCTCCCTCCACTCCGCTCTCCACGGTGGCCCGACGGCGTCGCCGACGCCATTGCCGTGGTCGATGAGGCTGTCCATCGGGCAGGGCGCGGCGAGGGGGCTGGCATACCTGCACGAGTGCAGCCCACGCCGGTACGTGCACGGGTGCATCAAGTCATCCAAGATCCTGCTCGACGACGAGCTCCGCGCCCACGTCTCCGGCTTCGGCCTCGCCCGCCTCGTCGCCGGCGGCGCGCACAAGGCGGCGGCGGCGCAGTCGAAGAAGCTGGGCGGCGCGGCGTGCGCGCTGCGCGGCGGGGGCGGGGCGCTGGCGTACGTCGCGCCGGAGCTCCGCACGCCCGGCGGCGCGGCCGCCGCGGCGACGCAGAAGGGCGACGTGTTCGCGCTCGGCGTCGTGCTGCTGGAGGCGGTGACCGGGCGCGAGCCGACGGAGGGCGAGGGCGGGCTGGAGCTGGAGGCGTGGGTGCGCCGCGCCTTCAAGGAGGAGCGGCCGCTGTCGGAGGTGGTCGACCCGACGCTGCTCGGCGAGGTGCACGCCAAGAAGCAGGTGCTCGCCGTCTTCCATGTCGCCCTCGGCTGCACCGAGCCCGACGCCGAGCTGCGCCCCCGCATGCGCGCCGTCGCCGAGAGCCTCGACCGGATCAACGCCTAA
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| Protein seq | MAAAARAAAVAVAVVVVVLGVEVAAALNTDGLALLALKFAVSEDPNGALSTWRDADNDPCGWSGVTCVDGGGGRVAGVELANFSLAGYLPSELSLLSELVTLSLPYNQLAGQIPVAITALQKLAALDLAHNLLSGQVPAGIGRLVSLSRLDLSSNQLNGSLPPAIAGLPRLSGVLNLSYNHFTGGIPPEFGGIPVAVSLDLRGNDLAGEIPQVGSLVNQGPTAFDDNPRLCGFPLKVECAGEKEDPRIPEANGGMNPGAAAAVGRPPRRRSSPTVPVLAAIVVVAIVAGVILQWQCRRRCAAATARDEEKESAKDKSGAVTLAGSEERRSGGEEGEVFVAVDDGFGMELEELLRASAFVVGKSRGGIVYRVVPGHGPAVAVRRLSEPDDGDGGSDSGWRRRRAFETEAAAIGRARHPNVARLRAYYYAPDEKLLIYDYLSNGSLHSALHGGPTASPTPLPWSMRLSIGQGAARGLAYLHECSPRRYVHGCIKSSKILLDDELRAHVSGFGLARLVAGGAHKAAAAQSKKLGGAACALRGGGGALAYVAPELRTPGGAAAAATQKGDVFALGVVLLEAVTGREPTEGEGGLELEAWVRRAFKEERPLSEVVDPTLLGEVHAKKQVLAVFHVALGCTEPDAELRPRMRAVAESLDRINA |
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| Function | Receptor protein kinase-like protein ZAR1 [UniProtKB/Swiss-Prot:Q9ZU46] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsN22_08G021010 | OsN22_08G021010_01 | Chr08 | 26145489 | 26148095 | + | NAM | ||
| CDS seq | ATGGCGGCAGCTGCGCGGGCGGCGGCGGTGGCGGTGGCGGTGGTGGTGGTGGTGCTCGGCGTGGAGGTTGCGGCTGCGCTGAACACGGACGGGCTGGCGCTTCTTGCGCTCAAGTTCGCGGTGTCGGAGGATCCCAATGGCGCGCTCTCGACGTGGAGGGACGCCGACAACGACCCCTGCGGCTGGTCGGGCGTCACCTGCGTCGACGGCGGTGGCGGCAGGGTCGCCGGCGTGGAGCTCGCCAACTTCTCGCTCGCGGGCTACCTCCCATCCGAGCTGTCGCTGCTGTCCGAGCTGGTGACGCTGTCCCTGCCCTACAACCAGCTCGCCGGCCAGATCCCGGTCGCCATCACGGCGCTGCAGAAGCTCGCGGCGCTCGACCTCGCCCACAACCTCCTCTCTGGCCAGGTTCCGGCTGGGATTGGGCGGCTCGTGTCGCTGTCCCGCCTCGATTTGTCCTCCAACCAGCTCAACGGCTCGCTGCCGCCGGCGATCGCCGGGCTTCCTCGTCTCTCTGGGGTTCTCAACCTGAGCTACAACCATTTCACCGGCGGGATCCCGCCGGAGTTCGGCGGCATTCCGGTGGCGGTGAGCCTTGACCTCCGCGGGAACGACCTCGCCGGCGAGATCCCGCAGGTGGGGTCCCTCGTCAACCAGGGCCCGACCGCCTTCGACGACAACCCGAGGCTCTGCGGGTTTCCGCTCAAGGTGGAGTGCGCCGGTGAGAAGGAAGATCCAAGAATCCCCGAGGCGAATGGTGGCATGAACCCCGGCGCGGCGGCGGCGGTCGGGAGGCCACCGAGGCGCCGGTCGTCGCCGACGGTGCCCGTTCTTGCTGCCATTGTGGTGGTTGCCATCGTCGCCGGGGTGATCCTGCAGTGGCAGTGCCGGCGGCGGTGCGCGGCGGCGACGGCGAGGGACGAGGAGAAGGAGTCGGCGAAGGATAAGAGCGGGGCGGTGACGCTGGCCGGCAGCGAGGAGCGGCGCAGCGGCGGGGAGGAAGGGGAGGTGTTCGTGGCGGTGGACGACGGGTTCGGGATGGAGCTGGAGGAGCTGCTCCGCGCGTCCGCGTTCGTCGTCGGGAAGAGCCGCGGCGGCATCGTGTACCGCGTCGTCCCGGGCCACGGCCCCGCCGTCGCCGTCCGCCGCCTCAGCGAGCCCGACGACGGCGACGGCGGCTCCGACTCCGGGTGGCGCCGGCGCCGCGCGTTCGAGACCGAGGCCGCCGCCATCGGCCGCGCGCGCCACCCCAACGTCGCGCGCCTCCGCGCCTACTACTACGCGCCCGACGAGAAGCTTCTCATCTACGACTACCTCTCCAATGGCTCCCTCCACTCCGCTCTCCACGGTGGCCCGACGGCGTCGCCGACGCCATTGCCGTGGTCGATGAGGCTGTCCATCGGGCAGGGCGCGGCGAGGGGGCTGGCATACCTGCACGAGTGCAGCCCACGCCGGTACGTGCACGGGTGCATCAAGTCATCCAAGATCCTGCTCGACGACGAGCTCCGCGCCCACGTCTCCGGCTTCGGCCTCGCCCGCCTCGTCGCCGGCGGCGCGCACAAGGCGGCGGCGGCGCAGTCGAAGAAGCTGGGCGGCGCGGCGTGCGCGCTGCGCGGCGGGGGCGGGGCGCTGGCGTACGTCGCGCCGGAGCTCCGCACGCCCGGCGGCGCGGCCGCCGCGGCGACGCAGAAGGGCGACGTGTTCGCGCTCGGCGTCGTGCTGCTGGAGGCGGTGACCGGGCGCGAGCCGACGGAGGGCGAGGGCGGGCTGGAGCTGGAGGCGTGGGTGCGCCGCGCCTTCAAGGAGGAGCGGCCGCTGTCGGAGGTGGTCGACCCGACGCTGCTCGGCGAGGTGCACGCCAAGAAGCAGGTGCTCGCCGTCTTCCATGTCGCCCTCGGCTGCACCGAGCCCGACGCCGAGCTGCGCCCCCGCATGCGCGCCGTCGCCGAGAGCCTCGACCGGATCAACGCCTAA
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| Protein seq | MAAAARAAAVAVAVVVVVLGVEVAAALNTDGLALLALKFAVSEDPNGALSTWRDADNDPCGWSGVTCVDGGGGRVAGVELANFSLAGYLPSELSLLSELVTLSLPYNQLAGQIPVAITALQKLAALDLAHNLLSGQVPAGIGRLVSLSRLDLSSNQLNGSLPPAIAGLPRLSGVLNLSYNHFTGGIPPEFGGIPVAVSLDLRGNDLAGEIPQVGSLVNQGPTAFDDNPRLCGFPLKVECAGEKEDPRIPEANGGMNPGAAAAVGRPPRRRSSPTVPVLAAIVVVAIVAGVILQWQCRRRCAAATARDEEKESAKDKSGAVTLAGSEERRSGGEEGEVFVAVDDGFGMELEELLRASAFVVGKSRGGIVYRVVPGHGPAVAVRRLSEPDDGDGGSDSGWRRRRAFETEAAAIGRARHPNVARLRAYYYAPDEKLLIYDYLSNGSLHSALHGGPTASPTPLPWSMRLSIGQGAARGLAYLHECSPRRYVHGCIKSSKILLDDELRAHVSGFGLARLVAGGAHKAAAAQSKKLGGAACALRGGGGALAYVAPELRTPGGAAAAATQKGDVFALGVVLLEAVTGREPTEGEGGLELEAWVRRAFKEERPLSEVVDPTLLGEVHAKKQVLAVFHVALGCTEPDAELRPRMRAVAESLDRINA
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 2.288188 | 1.264357 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0506400 | RBH | 0.096614 | 0.175166 | 2.004814 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g39590 | RBH | 0.138798 | 0.123365 | 0.505280 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0506400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0021460 | RBH | 0.0 | 1.031502 | 0.996357 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0021370 | RBH | 0.0 | 0.425565 | 0.722401 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0021250 | RBH | 0.0 | 0.0 | 1.728229 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0021440 | RBH | 0.028127 | 0.206272 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0021300 | RBH | 0.728293 | 3.013501 | 2.237353 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0399300 | RBH | 6.545374 | 2.365918 | 17.3875305 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0021190 | RBH | 0.0 | 0.253565 | 0.316743 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0419600 | RBH | 7.1507655 | 0.3268415 | 44.0111615 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0020520 | RBH | 0.0 | 0.096283 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0020820 | RBH | 0.072027 | 3.563034 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0020640 | RBH | 0.0 | 2.498707 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0021480 | RBH | 0.000000 | 0.165167 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0020850 | RBH | 0.000000 | 3.690631 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G014740 | SBH | 0.876988 | 0.0 | 0.652444 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0021170 | RBH | 0.000000 | 0.0 | 2.117973 |
