Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsN22_08G019500 | OGI:08068820 | 16/16 | N22 | OsN22RS2 | Gramene(+IsoSeq) | Chr08:24950205-24952041 | ||||||||
| Gene Symbol | OsbHLH047, bHLH047 | ||||||||||
| DNA seq | CTAGCTACAGCTCTGCTTCTGCTGCTGCTGCTGCTCTTGCTCGATCGTCTCGACGATCCCGTGTACCGCCGCCGCGATGTCGTCCACCGACGTGAGCTGGCAGTCTTCTTCCACCTGCAGCGACCACAGAGCAGCCATGCATGCGTTAGCGTCATTAAAAAAAAAAACGGTTGTTGTTTTCCTTCTGCTTCGTGTGCTCGGTTCTCTAGGGGTGAATGAGCGAAGCGAAGCAGCCATGACACTGATCCGAATGACGAGGAGTTTGTAGGCGTCGTTCATGACAATTTCTGCACGGAAAACGAGGCTATCTAGCTACAGTAGCCAGCTACTCGTAGCTGCTAAAATGGAGAAAATGGAGTAGAGTATTTTGGGGAGAGGATACGTGTACGCATGCACGTATACACGTACTCTCTCTGCATCCTTAAAAAAATCGAATCTAAATTCATTGTATTAGATTATGATTATGTTCTATCTTTTAGGTTAGTTTTTTTTTAAAGGAAGAAGTAGTGTGTTTTTACTATACCTTAAGGCTAAGGGAGTAGAGAGCCATGTGGCCGGCGCTGGCGACGTTGAGGTGGAGCACGGCGAGGCGGTGGTGTTGCAGCCCTGCCACCATCCTCAGCAGCTGCCTCGGCCGCCGCCGCGACAGCACCTTCAGGTTGGCGTGGCTCTCCACCATCGTCACCTCGATGTCCGCCACCGAGGACGGCTTCGACCCCGACACGTCCGCGTCCGCGTCGTCGCCCGCGCCGGCGCCGGCGACGGCATTGCCGTTTTCCGTTGCTGCTGCTGCTACAGTGGTGGTGGTTGTCGTGGGCACGGCGCTCATGGAGTACTGCGGGAACGTGAAGAAGCCCGCGAATGGCAACGCGGCGGCGGCGTCGGTGCGTGCGCGGCGGGCGTGTCTGTGCGCCTCCAGGGATTGGAGAAGCTGCTCCATCTCCTTGACGTAGTTGATTGCTCCGCCAATTATGGACGCCTGGTCGCCCTATCCACATGAGAATTTAATTTATTTATAGCTTGAATTGTTGATAATTCTAACAAGATCATCAATGGCGGTCTTGGGCGAAGTGAGCCCTAGATGGGTCGGCAGGAGACGTACCCTTTGCACGTAGGAGGCCGGCATGAGGGAGCGGAGCACGGCGAGGTACTCGTTCATCTGCTTCCGGCGGTTGCGCTCGACGGCGATGTGGGTCATGCGCTGGCTCTCCACCTCCTCCCTGTTCTTGACGGTCCTCGCCCTCCGCCGCTTCCTCCTCCCTGCGGCCGCCGCCGGCGCCGCCGCGGAGCCATCCCGTCCGACGACAGACGCACCTCCGTGCTCCGGCGGCGGCGCTGCGTCTGCGACGGAGGAATTACCGCCGTCCGGCTCCTCAATAAACCCCGAGACGGCGGCCATCACCGGGGAAGAGCTTGCGCCGCCTCCGCCGCCGTCCCAGAAGGCGTTCACCACCCCGTCGTCCACCACTAACTCCATCGCCCCCTTCCCCTGATCAACGCCACCGCCATACCCGTGGCTCCAGCTCCAAGCTCCTCCTGCAGCTGCTTCCGCCGCCATGGCACCGCCGCATCCGAAGTAGTATCCTTCCGAGAACACCACCGCCTCCAACGCCATGCTCCAATCAAGAAACCAAACCACCCACACACAAGAGAGAGATGTCTAGAGAGAGGCTATAGCTAGCTAGCTAGCTAGCTAGGTCATCTCCATGGGCAGACCGAGCTCCGATGATGGCGATGGCGAGGAAGGTGAGACTACACGTGAAGAAGGGAAGAGGACGAGAGGGCGGCAGCAGCATGGAGCAGCTGGGAATGGATGGAGGAGGGTGAAAAAGGCAGA
More
|
||||||||||
| CDS seq | ATGGCGTTGGAGGCGGTGGTGTTCTCGGAAGGATACTACTTCGGATGCGGCGGTGCCATGGCGGCGGAAGCAGCTGCAGGAGGAGCTTGGAGCTGGAGCCACGGGTATGGCGGTGGCGTTGATCAGGGGAAGGGGGCGATGGAGTTAGTGGTGGACGACGGGGTGGTGAACGCCTTCTGGGACGGCGGCGGAGGCGGCGCAAGCTCTTCCCCGGTGATGGCCGCCGTCTCGGGGTTTATTGAGGAGCCGGACGGCGGTAATTCCTCCGTCGCAGACGCAGCGCCGCCGCCGGAGCACGGAGGTGCGTCTGTCGTCGGACGGGATGGCTCCGCGGCGGCGCCGGCGGCGGCCGCAGGGAGGAGGAAGCGGCGGAGGGCGAGGACCGTCAAGAACAGGGAGGAGGTGGAGAGCCAGCGCATGACCCACATCGCCGTCGAGCGCAACCGCCGGAAGCAGATGAACGAGTACCTCGCCGTGCTCCGCTCCCTCATGCCGGCCTCCTACGTGCAAAGGGGCGACCAGGCGTCCATAATTGGCGGAGCAATCAACTACGTCAAGGAGATGGAGCAGCTTCTCCAATCCCTGGAGGCGCACAGACACGCCCGCCGCGCACGCACCGACGCCGCCGCCGCGTTGCCATTCGCGGGCTTCTTCACGTTCCCGCAGTACTCCATGAGCGCCGTGCCCACGACAACCACCACCACTGTAGCAGCAGCAGCAACGGAAAACGGCAATGCCGTCGCCGGCGCCGGCGCGGGCGACGACGCGGACGCGGACGTGTCGGGGTCGAAGCCGTCCTCGGTGGCGGACATCGAGGTGACGATGGTGGAGAGCCACGCCAACCTGAAGGTGCTGTCGCGGCGGCGGCCGAGGCAGCTGCTGAGGATGGTGGCAGGGCTGCAACACCACCGCCTCGCCGTGCTCCACCTCAACGTGGAAGAAGACTGCCAGCTCACGTCGGTGGACGACATCGCGGCGGCGGTACACGGGATCGTCGAGACGATCGAGCAAGAGCAGCAGCAGCAGCAGAAGCAGAGCTGTAGCTAG
More
|
||||||||||
| Protein seq | MALEAVVFSEGYYFGCGGAMAAEAAAGGAWSWSHGYGGGVDQGKGAMELVVDDGVVNAFWDGGGGGASSSPVMAAVSGFIEEPDGGNSSVADAAPPPEHGGASVVGRDGSAAAPAAAAGRRKRRRARTVKNREEVESQRMTHIAVERNRRKQMNEYLAVLRSLMPASYVQRGDQASIIGGAINYVKEMEQLLQSLEAHRHARRARTDAAAALPFAGFFTFPQYSMSAVPTTTTTTVAAAATENGNAVAGAGAGDDADADVSGSKPSSVADIEVTMVESHANLKVLSRRRPRQLLRMVAGLQHHRLAVLHLNVEEDCQLTSVDDIAAAVHGIVETIEQEQQQQQKQSCS |
||||||||||
| Function | Transcription factor bHLH96 [UniProtKB/Swiss-Prot:Q9C7T4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsN22_08G019500 | OsN22_08G019500_01 | Chr08 | 24950205 | 24952041 | - | NAM | ||
| CDS seq | ATGGCGTTGGAGGCGGTGGTGTTCTCGGAAGGATACTACTTCGGATGCGGCGGTGCCATGGCGGCGGAAGCAGCTGCAGGAGGAGCTTGGAGCTGGAGCCACGGGTATGGCGGTGGCGTTGATCAGGGGAAGGGGGCGATGGAGTTAGTGGTGGACGACGGGGTGGTGAACGCCTTCTGGGACGGCGGCGGAGGCGGCGCAAGCTCTTCCCCGGTGATGGCCGCCGTCTCGGGGTTTATTGAGGAGCCGGACGGCGGTAATTCCTCCGTCGCAGACGCAGCGCCGCCGCCGGAGCACGGAGGTGCGTCTGTCGTCGGACGGGATGGCTCCGCGGCGGCGCCGGCGGCGGCCGCAGGGAGGAGGAAGCGGCGGAGGGCGAGGACCGTCAAGAACAGGGAGGAGGTGGAGAGCCAGCGCATGACCCACATCGCCGTCGAGCGCAACCGCCGGAAGCAGATGAACGAGTACCTCGCCGTGCTCCGCTCCCTCATGCCGGCCTCCTACGTGCAAAGGGGCGACCAGGCGTCCATAATTGGCGGAGCAATCAACTACGTCAAGGAGATGGAGCAGCTTCTCCAATCCCTGGAGGCGCACAGACACGCCCGCCGCGCACGCACCGACGCCGCCGCCGCGTTGCCATTCGCGGGCTTCTTCACGTTCCCGCAGTACTCCATGAGCGCCGTGCCCACGACAACCACCACCACTGTAGCAGCAGCAGCAACGGAAAACGGCAATGCCGTCGCCGGCGCCGGCGCGGGCGACGACGCGGACGCGGACGTGTCGGGGTCGAAGCCGTCCTCGGTGGCGGACATCGAGGTGACGATGGTGGAGAGCCACGCCAACCTGAAGGTGCTGTCGCGGCGGCGGCCGAGGCAGCTGCTGAGGATGGTGGCAGGGCTGCAACACCACCGCCTCGCCGTGCTCCACCTCAACGTGGAAGAAGACTGCCAGCTCACGTCGGTGGACGACATCGCGGCGGCGGTACACGGGATCGTCGAGACGATCGAGCAAGAGCAGCAGCAGCAGCAGAAGCAGAGCTGTAGCTAG
More
|
|||||||
| Protein seq | MALEAVVFSEGYYFGCGGAMAAEAAAGGAWSWSHGYGGGVDQGKGAMELVVDDGVVNAFWDGGGGGASSSPVMAAVSGFIEEPDGGNSSVADAAPPPEHGGASVVGRDGSAAAPAAAAGRRKRRRARTVKNREEVESQRMTHIAVERNRRKQMNEYLAVLRSLMPASYVQRGDQASIIGGAINYVKEMEQLLQSLEAHRHARRARTDAAAALPFAGFFTFPQYSMSAVPTTTTTTVAAAATENGNAVAGAGAGDDADADVSGSKPSSVADIEVTMVESHANLKVLSRRRPRQLLRMVAGLQHHRLAVLHLNVEEDCQLTSVDDIAAAVHGIVETIEQEQQQQQKQSCS
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.495361 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0483900 | RBH | 0.0 | 0.0 | 0.793712 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g37730 | RBH | 0.0 | 0.0 | 0.205897 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0483900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0019880 | RBH | 0.0 | 0.0 | 0.999538 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0019800 | RBH | 0.0 | 0.0 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0019700 | RBH | 0.000000 | 0.0 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0019900 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0019770 | RBH | 0.0 | 0.0 | 1.462792 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0380100 | RBH | 1.4716405 | 0.6063745 | 2.547378 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0019690 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0399700 | RBH | 1.01546 | 0.4078685 | 14.9647555 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0019000 | RBH | 0.023928 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0019270 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0019120 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0019950 | RBH | 0.000000 | 0.0 | 0.362820 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0019330 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G013820 | RBH | 0.0 | 1.207643 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0019630 | RBH | 0.0 | 0.0 | 0.618531 |
