Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsN22_07G025160 | OGI:07074890 | 16/16 | N22 | OsN22RS2 | Gramene(+IsoSeq) | Chr07:26704092-26706584 | ||||||||
| Gene Symbol | Os_F0606 | ||||||||||
| DNA seq | ATGCTTGATAAGGCAATTGAGGTTGGCATTTTAAAAGATATGGACCTTTCTGTTCTGGACGAGGAGGAGATTGTAGATTGCACCGATAAGCACATGCTACAGCAAGCTTCATCTGTGAAAGACCTTTTCAGTGGCTATCCTAGTGTGCTTACTCGCCTCACAAGGCTCTCTCTTTACAATCTATGTTTTGCCCGTTGGGACTTGCACCATCATCTGTTTGAATGCTGCAATCAACTACGATACCTGAGTCTATCCAATTGTGATGTGGGGAAGAATGCGATATGGAAAATAAGTGCACCAAATTCGAACATCATTGTTCTTGAACTTGATGTATGCTGCTTCGAGAAACTTGAGGTGCTCTGCCTTCCCAAATTGAAGCGACTAAATTGGGACACTTGGCTTTCCCTTATGCCCCGCTGTCATTCGATGTTGTCCCGAATCTTCAGGAAGTATCTCTTATCTGCGGTGCAACAAATAAACATGAAGGATTTATTTTAAGTGAGGTTCTAAGTGGTACTACAAATATACATACTCTAACATTGGATTTCCAAGGAGAAAAGGTAAGTCCATCCTTTTTCATGGACTGCTGTTATCATTAGCATATAGTTGTTCGTGATGTACTACTAGTATATTTTCACATGAGCAAGAACAAATGTTTAATGTTAAGTAGCAATACTTCAATGATTATATGTATGCATTTCTAAAGCTGATGCATGCCTTAATTTTGTTTAACTAATTCAAATGTACGCTCATCCATGCATAACATCAATTCTCATGTTTCTTTTTTCATTTTTGTCGTGAATGTTTCTTTTTTTTTTTACGTGAATGTTTCTTGTTTTAGCTATGGATGAAGCCAGAAGGAAAACAACTCTTCCGTGCATTCAGCAATCTAAGGAAGCTATCTATACATAGCATCTTTTCTGAATTTGAATTGTTATGGACAACAAACCTCCTTGAAGCTGCACCATCACTTGAGATGTTTGATATTGAGGTACTTTGGTGCTTTTCCTAGTTACATTAGGTTAATTTGTCTTCTTTTGTGAACTCTAAGACACTCGTTTAATCATCTACATCCTGTCTCATTCTCCAGGATTTTTAACTAGGTTATTTTGTTTATTGTAGATATGGGAGCACACATGCGATGTTGACCGGGAACCAAAAGTTTTTGGGGAGAGACCGAATCCTGCATGGAAAGCGCCTGATGTTACAAGCTTCAGGAACTCTCTTCTGAAAGAGCTCCAAATTGTTGCTTTTAGACCACTAAAACAACAGTTAGAGTTCATCAGGGTTGTGATGCAGCAAGCTCCCAACCTGGGGACGATCATTCTGAAATACGACGATCCTTGTGAATACTGCGAAGCATTAGGCATTTTTCCACCTCGTTCTTCAACAGAATGTGTATTCCCTAAGAGCAAGGATGAGCAAGATAGGGTGATCAATCTTCTCAAAGATGGGGTCTGCTCCCCTGCACAAATAGTTTTTCGGTAATTGGGGAGCTGTTCAAAAGTTCCATGCTCTTTCCCTGCAGTATTCTGAGCTTATTAAGCGTAAAGAAAAGTTCCCTATCCTCATTATTTTTTTAATATAAAAGGCCCTGCTTGTTTGAAAGTAAGTTCTTGTATCACTCTAAATAAAATCAAGTTCTTATGGTCATAATGTACTAGCATATTTTCAAATATTTATACAAATTGCACAGAGTCAATCATCATATATATGTTTGTCTCCGCAAATACCTTTTCAGAATAGTGTACAACCTTACTAGATTTTGTAGGCGTGTTACGACCACAATTTTGTCGTCTAAATTGTACTTTTTCCGGAACGACAAAAAGGAAAAAAAACTAATCTCGTAGTATAAAAAAAGAGAGGATACATTGCTATTTCCAGGTTCTTCATGGCCCATCAACGCGTGTCTGTCTTGGGTTCGGTTAGACGGTCCAGTAAACCACAAGTGCCCAGTCTGAGAAGGCATAAGATTTCAGTACGCACTTTGGTGAACCATAGCATCAACCAAAATCTGTGAAAATCGTGTACTCCTAGCCTATATAACTGATGATGTGCATTAATTGGTCTTGCTCCTATGGCATTGTGACATTGCACAATTTTTAATCTTGTTATGACTGGCCAAGTTTATGGACGATCTGTTTTGTTGCAGGAAGCCGACGATGACGATATGCTCTCCATGTTGAACGATGATATTTCGTTGTCTATCTTAGAAAGAGTTGATATAAAAACGGCCGTAAGGACAATTGTCCTCTCAACACGCTGGAAACGTCTCCCCTGGATGCTTCCTGAGCTCTCAATTGATGTCAAGGATTTCTTTCTGTACCACAGCCGAACCGTATTGAAGATCTCGAATTAAAGCTTTACTTGATCAATAGTTACTCGAGTGTCATTGGTCCTCTTGTCAGTGAGGCAATTGATATTGGCATCTTAAAAGATTTGAACCTTGCCATCCCTGAAGAGAAGCCGATGGCTGATTGCACTACGAAATAG
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| CDS seq | ATGCTTGATAAGGCAATTGAGGTTGGCATTTTAAAAGATATGGACCTTTCTGTTCTGGACGAGGAGGAGATTGTAGATTGCACCGATAAGCACATGCTACAGCAAGCTTCATCTGTGAAAGACCTTTTCAGTGGCTATCCTAGTGTGCTTACTCGCCTCACAAGGCTCTCTCTTTACAATCTATGTTTTGCCCGTTGGGACTTGCACCATCATCTGTTTGAATGCTGCAATCAACTACGATACCTGAGTCTATCCAATTGTGATGTGGGGAAGAATGCGATATGGAAAATAAGTGCACCAAATTCGAACATCATTGTTCTTGAACTTGATGTATGCTGCTTCGAGAAACTTGAGGAAGTATCTCTTATCTGCGGTGCAACAAATAAACATGAAGGATTTATTTTAAGTGAGGTTCTAAGTGGTACTACAAATATACATACTCTAACATTGGATTTCCAAGGAGAAAAGCTATGGATGAAGCCAGAAGGAAAACAACTCTTCCGTGCATTCAGCAATCTAAGGAAGCTATCTATACATAGCATCTTTTCTGAATTTGAATTGTTATGGACAACAAACCTCCTTGAAGCTGCACCATCACTTGAGATGTTTGATATTGAGATATGGGAGCACACATGCGATGTTGACCGGGAACCAAAAGTTTTTGGGGAGAGACCGAATCCTGCATGGAAAGCGCCTGATGTTACAAGCTTCAGGAACTCTCTTCTGAAAGAGCTCCAAATTGTTGCTTTTAGACCACTAAAACAACAGTTAGAGTTCATCAGGGTTGTGATGCAGCAAGCTCCCAACCTGGGGACGATCATTCTGAAATACGACGATCCTTGTGAATACTGCGAAGCATTAGGCATTTTTCCACCTCGTTCTTCAACAGAATGTGTATTCCCTAAGAGCAAGGATGAGCAAGATAGGGTGATCAATCTTCTCAAAGATGGGGTCTGCTCCCCTGCACAAATAGAAGCCGACGATGACGATATGCTCTCCATGTTGAACGATGATATTTCGTTGTCTATCTTAGAAAGAGTTGATATAAAAACGGCCGTAAGGACAATTGTCCTCTCAACACGCTGGAAACGTCTCCCCTGGATGCTTCCTGAGCTCTCAATTGATCCGAACCGTATTGAAGATCTCGAATTAAAGCTTTACTTGATCAATAGTTACTCGAGTGTCATTGGTCCTCTTGTCAGTGAGGCAATTGATATTGGCATCTTAAAAGATTTGAACCTTGCCATCCCTGAAGAGAAGCCGATGGCTGATTGCACTACGAAATAG
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| Protein seq | MLDKAIEVGILKDMDLSVLDEEEIVDCTDKHMLQQASSVKDLFSGYPSVLTRLTRLSLYNLCFARWDLHHHLFECCNQLRYLSLSNCDVGKNAIWKISAPNSNIIVLELDVCCFEKLEEVSLICGATNKHEGFILSEVLSGTTNIHTLTLDFQGEKLWMKPEGKQLFRAFSNLRKLSIHSIFSEFELLWTTNLLEAAPSLEMFDIEIWEHTCDVDREPKVFGERPNPAWKAPDVTSFRNSLLKELQIVAFRPLKQQLEFIRVVMQQAPNLGTIILKYDDPCEYCEALGIFPPRSSTECVFPKSKDEQDRVINLLKDGVCSPAQIEADDDDMLSMLNDDISLSILERVDIKTAVRTIVLSTRWKRLPWMLPELSIDPNRIEDLELKLYLINSYSSVIGPLVSEAIDIGILKDLNLAIPEEKPMADCTTK |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsN22_07G025160 | OsN22_07G025160_01 | Chr07 | 26704092 | 26706584 | + | NAM | ||
| CDS seq | ATGCTTGATAAGGCAATTGAGGTTGGCATTTTAAAAGATATGGACCTTTCTGTTCTGGACGAGGAGGAGATTGTAGATTGCACCGATAAGCACATGCTACAGCAAGCTTCATCTGTGAAAGACCTTTTCAGTGGCTATCCTAGTGTGCTTACTCGCCTCACAAGGCTCTCTCTTTACAATCTATGTTTTGCCCGTTGGGACTTGCACCATCATCTGTTTGAATGCTGCAATCAACTACGATACCTGAGTCTATCCAATTGTGATGTGGGGAAGAATGCGATATGGAAAATAAGTGCACCAAATTCGAACATCATTGTTCTTGAACTTGATGTATGCTGCTTCGAGAAACTTGAGGAAGTATCTCTTATCTGCGGTGCAACAAATAAACATGAAGGATTTATTTTAAGTGAGGTTCTAAGTGGTACTACAAATATACATACTCTAACATTGGATTTCCAAGGAGAAAAGCTATGGATGAAGCCAGAAGGAAAACAACTCTTCCGTGCATTCAGCAATCTAAGGAAGCTATCTATACATAGCATCTTTTCTGAATTTGAATTGTTATGGACAACAAACCTCCTTGAAGCTGCACCATCACTTGAGATGTTTGATATTGAGATATGGGAGCACACATGCGATGTTGACCGGGAACCAAAAGTTTTTGGGGAGAGACCGAATCCTGCATGGAAAGCGCCTGATGTTACAAGCTTCAGGAACTCTCTTCTGAAAGAGCTCCAAATTGTTGCTTTTAGACCACTAAAACAACAGTTAGAGTTCATCAGGGTTGTGATGCAGCAAGCTCCCAACCTGGGGACGATCATTCTGAAATACGACGATCCTTGTGAATACTGCGAAGCATTAGGCATTTTTCCACCTCGTTCTTCAACAGAATGTGTATTCCCTAAGAGCAAGGATGAGCAAGATAGGGTGATCAATCTTCTCAAAGATGGGGTCTGCTCCCCTGCACAAATAGAAGCCGACGATGACGATATGCTCTCCATGTTGAACGATGATATTTCGTTGTCTATCTTAGAAAGAGTTGATATAAAAACGGCCGTAAGGACAATTGTCCTCTCAACACGCTGGAAACGTCTCCCCTGGATGCTTCCTGAGCTCTCAATTGATCCGAACCGTATTGAAGATCTCGAATTAAAGCTTTACTTGATCAATAGTTACTCGAGTGTCATTGGTCCTCTTGTCAGTGAGGCAATTGATATTGGCATCTTAAAAGATTTGAACCTTGCCATCCCTGAAGAGAAGCCGATGGCTGATTGCACTACGAAATAG
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| Protein seq | MLDKAIEVGILKDMDLSVLDEEEIVDCTDKHMLQQASSVKDLFSGYPSVLTRLTRLSLYNLCFARWDLHHHLFECCNQLRYLSLSNCDVGKNAIWKISAPNSNIIVLELDVCCFEKLEEVSLICGATNKHEGFILSEVLSGTTNIHTLTLDFQGEKLWMKPEGKQLFRAFSNLRKLSIHSIFSEFELLWTTNLLEAAPSLEMFDIEIWEHTCDVDREPKVFGERPNPAWKAPDVTSFRNSLLKELQIVAFRPLKQQLEFIRVVMQQAPNLGTIILKYDDPCEYCEALGIFPPRSSTECVFPKSKDEQDRVINLLKDGVCSPAQIEADDDDMLSMLNDDISLSILERVDIKTAVRTIVLSTRWKRLPWMLPELSIDPNRIEDLELKLYLINSYSSVIGPLVSEAIDIGILKDLNLAIPEEKPMADCTTK
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.197424 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0645701 | RBH | 0.171329 | 0.118615 | 0.951969 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g45010 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0645701 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0025340 | RBH | 0.0 | 1.558275 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0025410 | RBH | 0.076286 | 0.0 | 0.391642 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0025240 | SBH | 0.000000 | 0.308729 | 0.592003 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0025260 | RBH | 0.022558 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0025420 | SBH | 1.630450 | 2.740969 | 2.884786 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0443600 | RBH | 0.7497785 | 2.6002885 | 1.0013255 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0025920 | RBH | 0.000000 | 0.0 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0455400 | RBH | 1.566062 | 4.496789 | 8.288748 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0025240 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0025320 | RBH | 0.0 | 1.666322 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0025250 | RBH | 0.0 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0025450 | RBH | 0.280631 | 0.262915 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0025160 | RBH | 0.064691 | 1.997367 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G025090 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0025170 | RBH | 0.0 | 0.0 | 0.0 |
