Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsN22_07G010922 | OGI:01054360 | 5/16 | N22 | OsN22RS2 | Gramene(+IsoSeq) | Chr07:11690397-11694998 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | AAGATAAAAAGCAATCTGATATTGCAAATAGGAATTTAATACAAATGATAAGTTGGGGTTCCGAAGAACAAGCAGACGGACGGTCTAGCCGACACGCGCGCTGCAAGCAAGTAGCAATGGCTAAACTTTAATCTAACAAAACCCAAGAAACCCTAAAGGGGTAACTAGCTATATATAGGGGTGGGAGGACGACCTAGGGGTGCCTAGGGTCGTGCTCCACCAGCTTGGGGCGCACCCCACATGGGCCCCACCTGGGCCGGGGTCCCAAATGAAGTTACAAGCCCATAGGCCCATTATAGGTGACGCAACACCTTGTTCCTGTGATTCTGGCCACACGAGATGGAATTTAGAGAAGAGGCTGGATCCGTTAGAAAGAGGGCTCCGAGAGCTTTCCATCAAGTACTCACGGGCTGAAAACGGAGGTCGTATGCAGATTCGGTGGCCGTTTGAAGTCAGCAGTGTAGTAGGTGGCCGAATCGGATTCCAGCACTTGGAGTACTTGATCTCGATATCTTCTTGTTCATTCATGATGTGAGCAATGGTTGCATCCGTGGTAGCCATGGTCACATCAAAAGGCAAAAATGTAGATAAGAGAAGAGGGTCAGTGAAAAAGTGAAGAAAATTTTTACCGTAGTCCCTTGGTTGCTTGAGGCAGATAGCCTGATCCATTCATTCAATAAAGCAGAATCTTGAGCAACACCATCTTGGGCGACACCAGCTCCAATGCCTACACCATCTTGACCAGCACCAATTGGAACATCCTCAGCCCTTGCAGCCTGTCGACCCCCGATTTTGGAAATCGGAAATCTTCTGTGTTTATCAGTACCAATCCCTAGATCAGTAGTTGGTACACACATACATAGCCGAATCACAACATATCACGAATGAATTCAGGCTAAAAGAGTTAAATGCTTACATTAGGGCCAGGCAGGCCGACAACTACCAGAGAACAATAGCGGAAAACAAAAATAATACAAGGGCTCGGTTGATATGCCACAAGCAGTCGACTGGGGAACGAGACCTAGAATGGAACCGCACTCCGGTCATCTTGTTAGGTACGCAAGCGTACTAACAAGGGCTTCTCTTCAACACTCTACTAAAAGATATATATATATAGAGCAACAATGAGTACAGAAGTACTCAGCAAGCCACTACACAAAATGCAGTAATGTAAGGGTATTACAAAGAGGCTATGGTTACTTTGCGTAAAGCTGAGTTTTCAAATATCATTTCACAAACCTAAGACCTAGCATAAACTGTTCAAGTTTTAGTTCCATTGTTCATTAAACAGCGACGGTTCTGTCCACCATCTATTGTGTTCCCAAGGATAGCTTCCCGCCACTAGTCGTCATGGTTTTCTAGGGTTTACCCCTTCTTGCCTCTCAAGAAGTTGATCCACCAGTACAAAATCATCATGCATCATCCCACCCATCATTTTAAGAATTTAGAGTCTAGCCAAGTGTAATACATGTCCCGGTGCTCAATAACCGCGAGCACGGCTATTTGAATAGATTTGGTTTACTCACACTGCAGTGGATGTACACTTTACCCGTACTCCGCGACTTGCCCAACACATGAGCCTACGTCCCAACGAATGAGACTTGCCACGGCAAAGCCTTTCAACAACCTCACTTTGGCAGTACCCGTTCCATGAACTTGAGTCCTCATGCACTCTAGGCGTACACGGTTTCTAGCAGTGAGAGGAGTTCTGGCGCTCCCGGGAAGGGAAGACTCACACATGCATTAAGTTATAGTTAAGTTTAGGTTTACACATGGCAGCCCTACCGATGGCGACACCACTGTAGGCACCCACCCCTCGCGGTCCTACCAATGGCTGCCCCACCGTAGGCCCTGCCTCACACACATCAAGAAAACCACTATGCAGGGATACTGCCTCAGCTCGGCTATTTACTCCGCTAGGTCTATACCCATACGAGAAGTACGGTTGTACTGGAGTCGTTTCATGCTTAGCTTCATGGCTTGGTCCTTAATTGACCAAGGACGGCACTAGCCTTTACCGGACACCACCCAAGTCCTCCAGCCGCCCCAGTCGAAAACATTTGTTTAGTTTTAACTTTCTTTCACAAATCATCTCATCAATGTCATGGCAATGTGGCGCTCATGTCTCCACATACCGTATCTCAACTACCTTCCCCAAGGTAGTTGCCCAAGCATAAAGCATTTGATAAATATGAGAATGCATGAATCTAAATTAGCATTACTAAGCATTTGTCATAAGTGACTAGGGACACATACGTAATTATGGGTACAAGGGAATAATGAGATAAGCAATAATCAAAGGCATGGCATAATAACAAATAGGATATTCATCATTGCATGCAATTTTATTTGTAAACAAAACAATTTCGCAATTGGGATCAACCATGCTCAAGGGATGGGGTGATGACTTGCCTGCTCAGGATAGTTCTTATTCTTGATATAATCTTGATCAACCTTCACCTCCTGGAAGCTGCATACGTTGCCTCACGACTAATCGATACACCAATACTACAATACGCGAGAGAAACCAATATTCAAGCAACAATCAATATGTACAAACAAAATATAATTGTTGGGTCGTACCTAGGGTTGCTCACATTACTGTGTTTGCTAATGGATTGTAAGGTGCTACAAAGTCTCTACTATGGCTGCACTGTTTATATAGGTAAGGAAAATGGAGGTAACTTAGGCTCTAAATTACATAGCATGCAAGCAGCTGATGAGACAAGAAAGCTTATGGGCTAAGCCTTCTTAGTATTTTATATTATCATTATGGCTCTACTGGTACTAACTAGCACAGTATATGAAATGCACATTTTGCTAATATGTGGTTTAGTCTACCTACAGGGTTATGGGAGGGTTATATGACTACTCATGCATCTATTCAGATAAATGGTCTTATACTAAAGGTTCTGTTGTTGGATGGATTAATTTAATTAGGATCAACAAACAATCACAGGGAATCATTTATATTATTATTTTACCAATGGGGCATTATTTTAATTACGATCATATTTTGCTTGTCATTATAAATTATAAAAGGGTTAATAATCATCCATGATCTATATGTTAGATCTGTGAGGTTATAGGTACAGATTATTTGTCTGTGTGGTCTCGTAACGAGGTCAAGATTTATAATTAGTGTTTTACCTAACTTTGATGTTTATCAAACAATTCATAGTTTAATAGGTGCAACAGTAGGTGATTGACTTACTGTGTATGTGTTAAATGGATGTACTGCACATGCGAGTTCAATAATATGTTAATTGGATTATTTACCAAACATGAGTTATTTATTGTTCTATTAAATAATAGGTGTCAACCAAATTATATATATACTACTATATAGGATATTGCACTGGTTAAATCTATCATTCGATTGATTCCATCACACCCAGCTCTGTTATTATACCTCATGGACAAACTAAGGACTGATATGTGTGTACTTAGATTTTCAGTTATAAACTCATTAAGTTAATCCTCTATTTAGACAATGACTAAATCATGAACTTGACTATATATAATCATGGAATAATAAATGATACTAATATCTCCTATCTTCGCTTTAAATTGAACTAATACATATAGCTACACATGGTTCCCATAGTGACAGAACATGTTAACAACAAATATTCCTCTACCTAGTTCACTGTACAATGATAATTTTTATTTGCTAGCACATTTTTAGTTTAATCATTATCTAATCATGTGATATTAATTATTTAATAATTATAAATATATTTTATTAAATAGTGAGTTATATACCATTGGGAAGCTTATGAATTTAGATGAATTTAGGTTCAAGTTTCACTCCAATCGGAGTTAAAATGAATAAGTTATGCTAGTTTAAATATTCAAATTTGAATTAATCCGAGAAATTGTAAAAAGCTACTGTTCATAAACGATTTATTTTTAATCTAAAACATATTCACAGCCTTGTACCAACTGACAAGTGGGACCCTGGGTTTACTCCTTATCCTACCGAATTATTTTTCAATGCAAAACTGCATCGGTTAAATGACAGGTGGGCCCAGTTGGAACTCTCTCTCTCTCTCTCTTTCTTCTCTATCGTCTTCAACCTCCAGCCATCGGGAGGCAGCACCAGGGCACGGCTGGGCGCGACGGGCACGGGGCCGGGGCGGCACGGCGGTGGCCAGGGGGTGTGCGGAGGAGCTCTAGCGTCCCTCCACCGGCGGCGGCGGCGCAAGGCGGGGCAGGGGCGAGCGTTGCGGCACGGCAACGCCATGGCCGAGCTCGGCTGCAAGCAGCTACGGCGAACGGGATGGTTTGCGACCAAATTGGTGAGAGCGTGAGCATCTATGGCGCATGAGGGTTCCTTTTTTCCAGTAAAATAGAAGGGAGAGCCCCCGGGATAGCATGTCCACGGTGACCTCCATGGGTGGAGCTTTGGAGCTCGGCTTGGCACTGCTATGGACCTAATCGACGAAATTGATGGGGGATTTAATTCCTAGGGGACTAGGAGGAGTCACAGGAGCGAGGAATTACTGAGGGAATGCAGAATGGCGATGCTCGATGTCGCGGTGGTGGAGTAGAGAAGACGATGCCGGCACGCATGCTAGGTGTTCGACGAAATGTGTATCC
More
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| CDS seq | ATGAATGGATCAGGCTATCTGCCTCAAGCAACCAAGGGACTACGATATCGAGATCAAGTACTCCAAGTGCTGGAATCCGATTCGGCCACCTACTACACTGCTGACTTCAAACGGCCACCGAATCTGCATACGACCTCCGTTTTCAGCCCAATCACAGGAACAAGGTGTTGCGTCACCTATAATGGGCCTATGGGC |
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| Protein seq | MNGSGYLPQATKGLRYRDQVLQVLESDSATYYTADFKRPPNLHTTSVFSPITGTRCCVTYNGPMG |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsN22_07G010922 | OsN22_07G010922_01 | Chr07 | 11690397 | 11694996 | - | IsoSeq | ||
| CDS seq | ACACATTTCGTCGAACACCTAGCATGCGTGCCGGCATCGTCTTCTCTACTCCACCACCGTATTGGTGTATCGATTAGTCGTGAGGCAACGTATGCAGCTTCCAGG |
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| Protein seq | THFVEHLACVPASSSLLHHRIGVSISREATYAASR |
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsN22_07G010922 | OsN22_07G010922_02 | Chr07 | 11690398 | 11694998 | - | IsoSeq | ||
| CDS seq | ATGAATGGATCAGGCTATCTGCCTCAAGCAACCAAGGGACTACGATATCGAGATCAAGTACTCCAAGTGCTGGAATCCGATTCGGCCACCTACTACACTGCTGACTTCAAACGGCCACCGAATCTGCATACGACCTCCGTTTTCAGCCCAATCACAGGAACAAGGTGTTGCGTCACCTATAATGGGCCTATGGGC |
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| Protein seq | MNGSGYLPQATKGLRYRDQVLQVLESDSATYYTADFKRPPNLHTTSVFSPITGTRCCVTYNGPMG |
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsN22_07G010922 | OsN22_07G010922_03 | Chr07 | 11690403 | 11694998 | - | IsoSeq | ||
| CDS seq | GATACACATTTCGTCGAACACCTAGCATGCGTGCCGGCATCGTCTTCTCTACTCCACCACCGTATTGGTGTATCGATTAGTCGTGAGGCAACGTATGCAGCTTCCAGG |
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| Protein seq | DTHFVEHLACVPASSSLLHHRIGVSISREATYAASR |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| RI | Chr07 | 11690804 | 11691206 | - | OsN22_07G010922_03 | OsN22_07G010922_02,OsN22_07G010922_03 | All |
| RI | Chr07 | 11690804 | 11691206 | - | OsN22_07G010922_03 | OsN22_07G010922_02,OsN22_07G010922_03 | IsoSeq |
| RI | Chr07 | 11690804 | 11691206 | - | OsN22_07G010922_03 | OsN22_07G010922_02,OsN22_07G010922_03 | Leaf |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.283000 | 0.000000 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0004621 | RBH | 0.784181 | 0.0 | 0.076356 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
