Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsN22_05G012930 OGI:01011440 | 16/16 N22 | OsN22RS2 | Gramene(+IsoSeq) Chr05:17280996-17281442
Gene Symbol -
DNA seq

CTAGGATGAGAATTTATCATCACTATGACGAGAAATGATCAACTTAGGAGCCTCCACCTCCCTCTTGACATCTTTACGGTCTGTATCTATCTCCTACGAAAAAAAAACAAGTGGAAAATGTTAAGAGCAGGAGTGACAAATCCAGAACTGGAGCTGAACGTGAACCAAAAATATATTAAAATAAATTACCTGTGAATCATTGGGCTTCGTTTCATCGTCTATTAACATCTGCGCCTTTTGGAGATATGCATTCTCCTCTTGAAGACCATACTCATTGACTAGGGCCGTCCAAGTATCTTCAAAATCACTTGCTGTGCGTGCATGATATAAGTTGTGTAGTTCTGACTTCGTACCAAATAATATGTGCCAACGGCAGCGTGGGTGATCATACTTCTGCAGCGACTGATCGATCTTATCGCTCCGGGCACCAGTGTTCATCTTGTCCAT

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CDS seq

ATGGACAAGATGAACACTGGTGCCCGGAGCGATAAGATCGATCAGTCGCTGCAGAAGTATGATCACCCACGCTGCCGTTGGCACATATTATTTGGTACGAAGTCAGAACTACACAACTTATATCATGCACGCACAGCAAGTGATTTTGAAGATACTTGGACGGCCCTAGTCAATGAGTATGGTCTTCAAGAGGAGAATGCATATCTCCAAAAGGCGCAGATGTTAATAGACGATGAAACGAAGCCCAATGATTCACAGGAGATAGATACAGACCGTAAAGATGTCAAGAGGGAGGTGGAGGCTCCTAAGTTGATCATTTCTCGTCATAGTGATGATAAATTCTCATCCTAG

Protein seq

MDKMNTGARSDKIDQSLQKYDHPRCRWHILFGTKSELHNLYHARTASDFEDTWTALVNEYGLQEENAYLQKAQMLIDDETKPNDSQEIDTDRKDVKREVEAPKLIISRHSDDKFSS

Function -

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsN22_05G012930 OsN22_05G012930_01 Chr05 17280996 17281442 - NAM
CDS seq

ATGGACAAGATGAACACTGGTGCCCGGAGCGATAAGATCGATCAGTCGCTGCAGAAGTATGATCACCCACGCTGCCGTTGGCACATATTATTTGGTACGAAGTCAGAACTACACAACTTATATCATGCACGCACAGCAAGTGATTTTGAAGATACTTGGACGGCCCTAGTCAATGAGTATGGTCTTCAAGAGGAGAATGCATATCTCCAAAAGGCGCAGATGTTAATAGACGATGAAACGAAGCCCAATGATTCACAGGAGATAGATACAGACCGTAAAGATGTCAAGAGGGAGGTGGAGGCTCCTAAGTTGATCATTTCTCGTCATAGTGATGATAAATTCTCATCCTAG

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Protein seq

MDKMNTGARSDKIDQSLQKYDHPRCRWHILFGTKSELHNLYHARTASDFEDTWTALVNEYGLQEENAYLQKAQMLIDDETKPNDSQEIDTDRKDVKREVEAPKLIISRHSDDKFSS

Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.0 0.0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) NA NA NA NA NA
Nipponbare | IRGSP 1.0 | MSU LOC_Os05g28404 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db NA NA NA NA NA
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_05g0013330 SBH 0.0 0.0 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_05g0013340 RBH 0.0 0.0 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_05g0013190 SBH 0.0 0.0 0.0
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_05g0013230 RBH 0.0 0.000000 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_05g0013360 RBH 0.0 0.0 0.0
Minghui 63 | MH63RS3 | HZAU OsMH63_07G0121500 RBH 0.005146 0 0
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_05g0000170 SBH 0.0 0.0 0.0
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_05G0257800 RBH 0 0 0
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_05g0000170 SBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_05g0010150 SBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_05g0010250 SBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_05g0013290 SBH 0.0 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_05g0000170 SBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_05G012960 RBH 0.0 0.0 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_07g0007840 SBH 0.0 0.0 0.720352
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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