Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsN22_05G011310 | OGI:05038150 | 15/16 | N22 | OsN22RS2 | Gramene(+IsoSeq) | Chr05:15150885-15154583 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | GTCCGTTAACAATCAAATTAACTGTTATAAACTCCAACAATTTTCCCTATAAAACATGAGAACAGAAGCTTGAGAAGAATACTAAACGGTAGTTTGGTCTTATCGGCCATCTGGATGCATCATCTCTGAGAAGACAGCCTTTTGTCCAGAGATGCTCATAGTTGAGCGGGATGATGGTTGCAACCTGGTCGTTAAAGTCGATGATAACACGTTCAATGCTGTCTCTTCGCAGTTTTCCTCTGCACTCTCCTGCAGCTGTAGTGCAACCTCGAGGTTCCACAGGACATCACCCATGGATGGCCTGTTCATGCTGTAATCAGCAACACACTGCTCTGCAGTCTCTGTGAATTTCCTGAAGCACTGTGGGGTGATTTCCCCTTGGAGATGGGGGTCGATAATCTCACTGAGTATGCCTTTCTTACGGCAAGACAGTGCCCAGTCACGCAAGCTCACTTGCTCCTCTGGAAGTTCAGGGTTTATTACCGGACGTGCGCATAGAACCTCGAACAAAAGAACCCCAAAGGAGAAGACATCTGATTTCTTGGTGAGTTTCTGCCTTCGAAAGTACTCCGGGTCGAGATATCCAAAGCTGCCTTTCACAACAGTGCTCACATAGGTTTTGTCCTTGTCTGTGCTAACCTTGGACAGCCCAAAATCTGAAACCTTTGCCACCCATTTGCCATCGAACAGAATGTTGGTACTCTTCACATCGCGGTGGATGATGGTCTGCTTCGCACCAGTGTGTAGGTAATGCAGCCCCAACGCTGCACCGATGCAGATCTCAAGCCGTTGCTTCCATGGAAGAGGTGGCTTTTGGGAGCCATACAAGTGCTCTTGAAGGGTACCATTTTCCATGTGATCATACACAAGGATCATCTCGTTCTCGTCTTCGCAATAGCCAATCAGAGAAACTAGGTGGCGATGACGGAGCTTGGACAACATCTCAATCTCTGTCTGAAATTCGTTGATACCCTGCTGGGACAGAGGGTCTCCACGCTTGATTGCCACCTTCATTCCATGATCTAACTCACCCTTGTATACATTCCCAAACCCGCCTTTGCCAAGGAGAAAGGCTTCATCAAAGTTACTGGTAGCTTCCTGGATTTGCAAGAACGTGAATTGGTGGCAAAGGTTGGATTTCTTTGAGAGCAAGGTGGCTAATAACAACTCTTTGTTCGTATTTCCATGATCAACTCTTTTCTTTCGTATGTTGATAATATACATGCTCAAACTGGCAATCAACAGCACCACCAAAACAAAAATAGCTCCACCAATGGTTGCCAGACGAGGATCCCCATCACGGTGGCTCCAGGGAATAGGGTTCATTCCAGCAAGGTTACTTTTGTTGACATCCTGTAGCTTGAAGACCTCAAGACCATTCAGAATTGCATCAACAAATTCTGGGTTGGTTTCAACATCAGGGTGAAGTGCAACTCTCAGGTCTGTCTGACCATAACCAATTGGGCCAACTATGTAGTTGGTGTAGATTGGCACACCAATTCCTCCACTCAAAACAATGACATCCATCTTCTGTGCTGTCTGGTTGTTGATGTATACAAAGAACGTCCTCTGGTTCGCCTTGGTTATTGGGTGCTGGATCTCACAGAAATGGAGCCGTAAAAGATAGTGGAATCCTGCATCAATCGGTAGAATCCATGTAAGATTGTACCTCAAGTTGATATATCCCTTTAGCCCCATGGACCTTGCTGTCTCATATAGACCAACTGGGGCTATGTAACTTGGCATGGTACGAGGGTAACTGATGGTTACAGTGTCATCCTTGAAAAAGTTCAGGCCTGAGTCTCCAGAAATGTAAGGGGAATCCTTGCCCCATGTGCGACAAAATTCAGAATCATCTTTTGGGGAGATTGTCTCACCCCCAACATTAAGACGATACATCGTCTGAAGGCCTATATTAACAGAGATTGGGAATGGATCTGAGATCCCAACATTTAAAAATGTTGGCGCAGGTTTCGTGAAAATATCAGGAGTGGACACAACCTCAATGCCATTCACAAACGCATAAGAACCGGTGTGGTGAGGAGACAGGGAAAATGTGACATCGAGATCACCCGAAGGAACATTCACTGAGTATTCAAGGATGAGATAGGTTCGACCCATCGCATGAGCTACCTGGGAAGGATTAAAATCATTCAGAAGGACAAGGATCCCAGCAGTGACACTAAACAAGGCATCTGCAGCAGCACGATCAGCATACTCAGTAGGATAAAAGTAGAGGCGAAGGAACACACGACCAGGGTTAAGACCAAACCAATATGTGAAATTGGAACTGAATATGCGTGCCGTCATGTAAGGCACTGGGGAGGGAAGCAAGGGGTCTAGGTATGACGCGTTGGCTGCCAAACCATCCAATGCTAACTTGGAGTTAGCATCCCCTTCCCAAGTTCGACCATCAGAATCAATGGCAGTGCTGGTGCCACCACATCTAAGGCGGATTTGGTGAGGACCTGTGAAGTTACCAGCCACCACATCAAGTAACAAGAGAGAGAACAGTGGAATGCACAGGAGGGTAGCCAGTTCTGTTCTGTTAGCCATTCCATCTGCTGGGTGTATGAAGTTGAGTCATGTGAGGATTTCTGTACAACAGAATAATATAGGGAAATATAAGCCTATAAGGTGTGTTACATCTAAGAGCAGTTGTTCTGTCATGCTAGAATATTGGAAACCTTCTATGGATATGCAAAAAGATTTAGAATAACAATTAACTTGTGTACAGTATTCTTGTTCATGAAGTAGATACAACCAAAGAGAGCTAGATATTTGACCTGAAATTATCAATGGAAGGGAAAAAAACTACACTTTGTGATTAAAATCTGAATCAAGAAAAAATATTAATTAACTACTCCCTCCGTTCCAAAATATAAGCATTTTTAGCATAGTGAGAAGTCAAACATTTTCAACTTTGACTATTAATAGCAAAAAAATAGAAAAGATCACTCATATAAAATTGGTGTTACTAGATTTATCATTAAACAAACTATCGTAATATATAGCTCTTTTTATTTAAAATATCTTACTTTTATAGATATTATTGGTCAAAGTAGCATCTTGGAGACTGTGTCATAGTCCAAAAATGCTTATATTTTAGGACGAAGGGAGTATAAGATTCTCCTTGATTGATTTAATTGTTCTTCTATTTTCCCTTTGTATGATTTTTCAACAATAAAGGCTAGTAAAAATTTTCAGATATGTGGATCTATTTCCAAATTGACATACAGTGACTACAATTTCATTCAAGATAAGGGTGATTTCTCATATCAAATCAAATATTAACCTTTTTGTTGCTCCAAAGGAGATTCTTTGTATTTTACGATAATATGAATACGAAAAATATCTTCATAATCTGATGATTGGTGTCGTTTAATTCATTGAATTATCTCACCAGTTAAGCAGTTATGTTTTATGTAAGCACCTATAGCACATGGCAGATCTTCAATCGAATCTTGGCCATCATGTAAGGGTTTATAGATTTGAGTATAGAAAGATAGCTGCATACCAGTAAGAAAACCTCCAGAACAACAAACCAAATCGCATTTCAAACAACAAAAAAGAAACTACCTCAAAGACGGAAATGATGAAACAAGGAGATTGAAATTACCTCATAATATACTCGAAGCTATCATTTGCCAAAGAAATAGAGGTTTAACCTATAGGACATGATAAAATGGGAGCTGCGGC
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| CDS seq | ATGGCTAACAGAACAGAACTGGCTACCCTCCTGTGCATTCCACTGTTCTCTCTCTTGTTACTTGATGTGGTGGCTGGTAACTTCACAGGTCCTCACCAAATCCGCCTTAGATGTGGTGGCACCAGCACTGCCATTGATTCTGATGGTCGAACTTGGGAAGGGGATGCTAACTCCAAGTTAGCATTGGATGGTTTGGCAGCCAACGCGTCATACCTAGACCCCTTGCTTCCCTCCCCAGTGCCTTACATGACGGCACGCATATTCAGTTCCAATTTCACATATTGGTTTGGTCTTAACCCTGGTCGTGTGTTCCTTCGCCTCTACTTTTATCCTACTGAGTATGCTGATCGTGCTGCTGCAGATGCCTTGTTTAGTGTCACTGCTGGGATCCTTGTCCTTCTGAATGATTTTAATCCTTCCCAGGTAGCTCATGCGATGGGTCGAACCTATCTCATCCTTGAATACTCAGTGAATGTTCCTTCGGGTGATCTCGATGTCACATTTTCCCTGTCTCCTCACCACACCGGTTCTTATGCGTTTGTGAATGGCATTGAGGTTGTGTCCACTCCTGATATTTTCACGAAACCTGCGCCAACATTTTTAAATGTTGGGATCTCAGATCCATTCCCAATCTCTGTTAATATAGGCCTTCAGACGATGTATCGTCTTAATGTTGGGGGTGAGACAATCTCCCCAAAAGATGATTCTGAATTTTGTCGCACATGGGGCAAGGATTCCCCTTACATTTCTGGAGACTCAGGCCTGAACTTTTTCAAGGATGACACTGTAACCATCAGTTACCCTCGTACCATGCCAAGTTACATAGCCCCAGTTGGTCTATATGAGACAGCAAGGTCCATGGGGCTAAAGGGATATATCAACTTGAGGTACAATCTTACATGGATTCTACCGATTGATGCAGGATTCCACTATCTTTTACGGCTCCATTTCTGTGAGATCCAGCACCCAATAACCAAGGCGAACCAGAGGACGTTCTTTGTATACATCAACAACCAGACAGCACAGAAGATGGATGTCATTGTTTTGAGTGGAGGAATTGGTGTGCCAATCTACACCAACTACATAGTTGGCCCAATTGGTTATGGTCAGACAGACCTGAGAGTTGCACTTCACCCTGATGTTGAAACCAACCCAGAATTTGTTGATGCAATTCTGAATGGTCTTGAGGTCTTCAAGCTACAGGATGTCAACAAAAGTAACCTTGCTGGAATGAACCCTATTCCCTGGAGCCACCGTGATGGGGATCCTCGTCTGGCAACCATTGGTGGAGCTATTTTTGTTTTGGTGGTGCTGTTGATTGCCAGTTTGAGCATGTATATTATCAACATACGAAAGAAAAGAGTTGATCATGGAAATACGAACAAAGAGTTGTTATTAGCCACCTTGCTCTCAAAGAAATCCAACCTTTGCCACCAATTCACGTTCTTGCAAATCCAGGAAGCTACCAGTAACTTTGATGAAGCCTTTCTCCTTGGCAAAGGCGGGTTTGGGAATGTATACAAGGGTGAGTTAGATCATGGAATGAAGGTGGCAATCAAGCGTGGAGACCCTCTGTCCCAGCAGGGTATCAACGAATTTCAGACAGAGATTGAGATGTTGTCCAAGCTCCGTCATCGCCACCTAGTTTCTCTGATTGGCTATTGCGAAGACGAGAACGAGATGATCCTTGTGTATGATCACATGGAAAATGGTACCCTTCAAGAGCACTTCTTTGGATATCTCGACCCGGAGTACTTTCGAAGGCAGAAACTCACCAAGAAATCAGATGTCTTCTCCTTTGGGGTTCTTTTGTTCGAGGTTCTATGCGCACGTCCGGTAATAAACCCTGAACTTCCAGAGGAGCAAGTGAGCTTGCGTGACTGGGCACTGTCTTGCCGTAAGAAAGGCATACTCAGTGAGATTATCGACCCCCATCTCCAAGGGGAAATCACCCCACAGTGCTTCAGGAAATTCACAGAGACTGCAGAGCAGTGTGTTGCTGATTACAGCATGAACAGGCCATCCATGGGTGATGTCCTGTGGAACCTCGAGGTTGCACTACAGCTGCAGGAGAGTGCAGAGGAAAACTGCGAAGAGACAGCATTGAACGTGTTATCATCGACTTTAACGACCAGGTTGCAACCATCATCCCGCTCAACTATGAGCATCTCTGGACAAAAGGCTGTCTTCTCAGAGATGATGCATCCAGATGGCCGATAA
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| Protein seq | MANRTELATLLCIPLFSLLLLDVVAGNFTGPHQIRLRCGGTSTAIDSDGRTWEGDANSKLALDGLAANASYLDPLLPSPVPYMTARIFSSNFTYWFGLNPGRVFLRLYFYPTEYADRAAADALFSVTAGILVLLNDFNPSQVAHAMGRTYLILEYSVNVPSGDLDVTFSLSPHHTGSYAFVNGIEVVSTPDIFTKPAPTFLNVGISDPFPISVNIGLQTMYRLNVGGETISPKDDSEFCRTWGKDSPYISGDSGLNFFKDDTVTISYPRTMPSYIAPVGLYETARSMGLKGYINLRYNLTWILPIDAGFHYLLRLHFCEIQHPITKANQRTFFVYINNQTAQKMDVIVLSGGIGVPIYTNYIVGPIGYGQTDLRVALHPDVETNPEFVDAILNGLEVFKLQDVNKSNLAGMNPIPWSHRDGDPRLATIGGAIFVLVVLLIASLSMYIINIRKKRVDHGNTNKELLLATLLSKKSNLCHQFTFLQIQEATSNFDEAFLLGKGGFGNVYKGELDHGMKVAIKRGDPLSQQGINEFQTEIEMLSKLRHRHLVSLIGYCEDENEMILVYDHMENGTLQEHFFGYLDPEYFRRQKLTKKSDVFSFGVLLFEVLCARPVINPELPEEQVSLRDWALSCRKKGILSEIIDPHLQGEITPQCFRKFTETAEQCVADYSMNRPSMGDVLWNLEVALQLQESAEENCEETALNVLSSTLTTRLQPSSRSTMSISGQKAVFSEMMHPDGR |
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| Function | Receptor-like protein kinase FERONIA [UniProtKB/Swiss-Prot:Q9SCZ4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsN22_05G011310 | OsN22_05G011310_01 | Chr05 | 15150885 | 15154583 | - | NAM | ||
| CDS seq | ATGGCTAACAGAACAGAACTGGCTACCCTCCTGTGCATTCCACTGTTCTCTCTCTTGTTACTTGATGTGGTGGCTGGTAACTTCACAGGTCCTCACCAAATCCGCCTTAGATGTGGTGGCACCAGCACTGCCATTGATTCTGATGGTCGAACTTGGGAAGGGGATGCTAACTCCAAGTTAGCATTGGATGGTTTGGCAGCCAACGCGTCATACCTAGACCCCTTGCTTCCCTCCCCAGTGCCTTACATGACGGCACGCATATTCAGTTCCAATTTCACATATTGGTTTGGTCTTAACCCTGGTCGTGTGTTCCTTCGCCTCTACTTTTATCCTACTGAGTATGCTGATCGTGCTGCTGCAGATGCCTTGTTTAGTGTCACTGCTGGGATCCTTGTCCTTCTGAATGATTTTAATCCTTCCCAGGTAGCTCATGCGATGGGTCGAACCTATCTCATCCTTGAATACTCAGTGAATGTTCCTTCGGGTGATCTCGATGTCACATTTTCCCTGTCTCCTCACCACACCGGTTCTTATGCGTTTGTGAATGGCATTGAGGTTGTGTCCACTCCTGATATTTTCACGAAACCTGCGCCAACATTTTTAAATGTTGGGATCTCAGATCCATTCCCAATCTCTGTTAATATAGGCCTTCAGACGATGTATCGTCTTAATGTTGGGGGTGAGACAATCTCCCCAAAAGATGATTCTGAATTTTGTCGCACATGGGGCAAGGATTCCCCTTACATTTCTGGAGACTCAGGCCTGAACTTTTTCAAGGATGACACTGTAACCATCAGTTACCCTCGTACCATGCCAAGTTACATAGCCCCAGTTGGTCTATATGAGACAGCAAGGTCCATGGGGCTAAAGGGATATATCAACTTGAGGTACAATCTTACATGGATTCTACCGATTGATGCAGGATTCCACTATCTTTTACGGCTCCATTTCTGTGAGATCCAGCACCCAATAACCAAGGCGAACCAGAGGACGTTCTTTGTATACATCAACAACCAGACAGCACAGAAGATGGATGTCATTGTTTTGAGTGGAGGAATTGGTGTGCCAATCTACACCAACTACATAGTTGGCCCAATTGGTTATGGTCAGACAGACCTGAGAGTTGCACTTCACCCTGATGTTGAAACCAACCCAGAATTTGTTGATGCAATTCTGAATGGTCTTGAGGTCTTCAAGCTACAGGATGTCAACAAAAGTAACCTTGCTGGAATGAACCCTATTCCCTGGAGCCACCGTGATGGGGATCCTCGTCTGGCAACCATTGGTGGAGCTATTTTTGTTTTGGTGGTGCTGTTGATTGCCAGTTTGAGCATGTATATTATCAACATACGAAAGAAAAGAGTTGATCATGGAAATACGAACAAAGAGTTGTTATTAGCCACCTTGCTCTCAAAGAAATCCAACCTTTGCCACCAATTCACGTTCTTGCAAATCCAGGAAGCTACCAGTAACTTTGATGAAGCCTTTCTCCTTGGCAAAGGCGGGTTTGGGAATGTATACAAGGGTGAGTTAGATCATGGAATGAAGGTGGCAATCAAGCGTGGAGACCCTCTGTCCCAGCAGGGTATCAACGAATTTCAGACAGAGATTGAGATGTTGTCCAAGCTCCGTCATCGCCACCTAGTTTCTCTGATTGGCTATTGCGAAGACGAGAACGAGATGATCCTTGTGTATGATCACATGGAAAATGGTACCCTTCAAGAGCACTTCTTTGGATATCTCGACCCGGAGTACTTTCGAAGGCAGAAACTCACCAAGAAATCAGATGTCTTCTCCTTTGGGGTTCTTTTGTTCGAGGTTCTATGCGCACGTCCGGTAATAAACCCTGAACTTCCAGAGGAGCAAGTGAGCTTGCGTGACTGGGCACTGTCTTGCCGTAAGAAAGGCATACTCAGTGAGATTATCGACCCCCATCTCCAAGGGGAAATCACCCCACAGTGCTTCAGGAAATTCACAGAGACTGCAGAGCAGTGTGTTGCTGATTACAGCATGAACAGGCCATCCATGGGTGATGTCCTGTGGAACCTCGAGGTTGCACTACAGCTGCAGGAGAGTGCAGAGGAAAACTGCGAAGAGACAGCATTGAACGTGTTATCATCGACTTTAACGACCAGGTTGCAACCATCATCCCGCTCAACTATGAGCATCTCTGGACAAAAGGCTGTCTTCTCAGAGATGATGCATCCAGATGGCCGATAA
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| Protein seq | MANRTELATLLCIPLFSLLLLDVVAGNFTGPHQIRLRCGGTSTAIDSDGRTWEGDANSKLALDGLAANASYLDPLLPSPVPYMTARIFSSNFTYWFGLNPGRVFLRLYFYPTEYADRAAADALFSVTAGILVLLNDFNPSQVAHAMGRTYLILEYSVNVPSGDLDVTFSLSPHHTGSYAFVNGIEVVSTPDIFTKPAPTFLNVGISDPFPISVNIGLQTMYRLNVGGETISPKDDSEFCRTWGKDSPYISGDSGLNFFKDDTVTISYPRTMPSYIAPVGLYETARSMGLKGYINLRYNLTWILPIDAGFHYLLRLHFCEIQHPITKANQRTFFVYINNQTAQKMDVIVLSGGIGVPIYTNYIVGPIGYGQTDLRVALHPDVETNPEFVDAILNGLEVFKLQDVNKSNLAGMNPIPWSHRDGDPRLATIGGAIFVLVVLLIASLSMYIINIRKKRVDHGNTNKELLLATLLSKKSNLCHQFTFLQIQEATSNFDEAFLLGKGGFGNVYKGELDHGMKVAIKRGDPLSQQGINEFQTEIEMLSKLRHRHLVSLIGYCEDENEMILVYDHMENGTLQEHFFGYLDPEYFRRQKLTKKSDVFSFGVLLFEVLCARPVINPELPEEQVSLRDWALSCRKKGILSEIIDPHLQGEITPQCFRKFTETAEQCVADYSMNRPSMGDVLWNLEVALQLQESAEENCEETALNVLSSTLTTRLQPSSRSTMSISGQKAVFSEMMHPDGR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.735875 | 0.202086 | 0.267670 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_05g0318600 | RBH | 0.166808 | 0.171255 | 0.334270 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g25430 | RBH | 0.182695 | 0.115183 | 0.086048 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os05g0318600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_05g0011610 | SBH | 3.667892 | 14.974699 | 2.695651 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_05g0011630 | SBH | 1.381175 | 6.521722 | 3.506711 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_05g0011580 | SBH | 6.908697 | 9.808280 | 6.895586 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_05g0011640 | SBH | 1.671042 | 0.368857 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_05g0011610 | RBH | 1.898655 | 4.997316 | 2.707520 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_05G0217700 | RBH | 0.723205 | 13.0703615 | 0.0025745 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_05g0011360 | RBH | 0.119341 | 0.073065 | 0.079824 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_05G0227400 | RBH | 0.8710345 | 11.9741305 | 0.171629 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0011540 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_05g0011460 | RBH | 0.111490 | 2.752316 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_05g0011590 | RBH | 0.0 | 2.085416 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_05g0011610 | RBH | 0.289984 | 0.196888 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_05g0011640 | RBH | 2.110161 | 7.054596 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_05g0011610 | SBH | 5.892210 | 28.277153 | 8.876738 |
