Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsN22_05G011270 | OGI:05037970 | 16/16 | N22 | OsN22RS2 | Gramene(+IsoSeq) | Chr05:15090256-15094096 | ||||||||
| Gene Symbol | OsCrRLK1L12, GW5.1 | ||||||||||
| DNA seq | GATCATAACCAGTCCAATCCAGTTTATGCAGTTTTCTCCCCTTCGCGATGGAGTTTTCATGCATCTGGAGTGATCTTATCAGGTAAGTTCTTTCCACGTTGTCTCATCATTTTGTTCTCCAGGTTTCCTGTAATCATATTTGATATAAGGTAGTGCTAACCTTCTCTCCAGATCATGGCTTCATTTTTAGAAATAAGCTCTGCCCTTTATTTGATATCTTCTTTTCCTGCTTCGTAGAGTTGTTTGTGATCTTACAGTTTTACAGGCTTCAAAACCCAGCTATTTTGGCTTCAATTTTTTCCCATTACAGTTATTTAATTAATTTATGATCTACCTTATGTTGCTTTTGTATGTTTTCCTCTTGAAGTTAAATTAGGGGATGTTCGGCACCTAGATTTGCTTTAAACCAATTCGACTTTAATTCAGAATTCCAATTAGAGTAAATTTAATAAAACCCCATGTTTTATTACCAAAGTTAAAAAAATGCGTTATTGTAGCATGTACTTTGATGCTAAAGTTTCACAAAATCTCAACCCTATTTAAATTCCAGACAATGTAGCATGTATTTACTTAATTTTTGCCATTATAAAATGTCTATAGAATTTGAATTACGAATTTCTTGGTTAAAATGTTTCATTATATTGAACCCTTCATTACTCTGAACAATATTGTTTTAAATATTTAAAATTTGCTAAGAGTTGAATAAGGGCGGGACTTTATGAAATTTTTAACCTATATGCTACCAGCTATAACTCCCAGAGTTTATAGCAAGTTTGACAATGAATAACCTATAGTTTACTGTGAAATTTGTTCTTGTATTTACTTTGATATTTTTGAAATTTGAATGGAAAACCATACAATTATTTTTTAGATTTAATATGAATTCCTTTTTTCTTGGTTGCTTGACATGGACTCTTTACTTTTAAATTTGTAATCCCAATTTGAACACAGAGTCTTATTAATGAAACTGTTTCGAGGACTGGATTGGAACACAGAGGAGATCTGCCTAAACAGGATTGGACTGGTTATGATCACTGAATAGAAACCAGAGTCTTATTAATGAAACCATACAATTTGAACGCAGATCTCCTGCGTGCAAAAAAAGTTATTGAACATAGGCTTTTTGGGGTCGCGGGAGGGGGTTGCTACACAGGCCATTGAGCTCAATTGAGGCCTGCACACAAACATTTGTTTTAGTGCTTGAGCTGAAAGAATGTGATGGAACTGTTTCGAGAAAATCACTAAGTGGGAATGAACTGTAAATGTTATATAGAATTTGTAGCCTTTTAAACATCTAGGACTATATTCTTGAAGGACTCTAATTAATATTCTTTGTACAGGAGTGCAAAAATTGTCTTTTGATGACCTAGACATATCGTTAATCTGCGGCAACCACATAGACAATGTTGCATTTTCTTTCTTTAATCATGTGCCTGTAGATGCTACTGTCCTGATACCATCCAATGGCTTGTTCTGGAGTCTTTGTTTTGTTCTTTCTTTTATTCATCCTATATTGGTCATTTTCTTCTCATTACAAATTTCTGACCTTTAACCTGATGATTTTTTTTTGGCAAAAAAAACTCGTCACATTAAGTGTAATAGAACAGGAGCTCCTAGTAGTTCATGCAAATATTCTATTCTCCCATACCTCTCTTTTTGAAAATGTAACGAATATTTGAGCAAATAGTTAAATATGAGATCGTGAGTAATTTGTGTTAAACTAGAAGATGGATCAAGCCAAAATGTTTTGCCATAATATTCAACTCTGTTCTCTTCTGCAGAATTTACTAGCGGTTTTTCATAGTACTTGATACAATGTATATTATTTTGGTGTGTTTTCTTCCATGATGAATTATTGATGTTGCTTCAATCTTCAGTTTGATTATAATTTCTTAAGCAGAAATTTACAATACAATTAGCTGAATTTCCAAATTCTTTGTTTCTTGTGATTGCAGGGAAGTCTATAGCTATCTGGACATGATTTCTCCATAAAAAACAGTTCAATTCCTCAAACACTCCAATTTCCTTGCCCCAAGTCCCACCCATAGAAAACATTACGCAATCGTTCCCACCTATCTTATAGCAATTTGTTAGCCGGTAATTTTATAGCATTGATGTGAAGGAACCTTCAAACTTCCATATTTTCATACAAAACAACAATCATTACCTATGATACACCCAAGCCTACTAACTACCATCCAATGGGTCGCACTGTCTACCCTCATATTGATCACCATATCGGCTGATAACTACTCATCATCCTCTAGCCCAATCTTTCTAAATTGTGGAGCCTCCACCATGCAACTTGATATCAATAATCGGAGTTGGGAGGGGGACACTAGATCCAAGTTTGCATCAGCAATGAATGGAATTGCAGCTAGTGCTACATACCAAGACCCTTCACTCCCATCTCTTGTGCCTTACATGACATCCCGTATATTCATTTCAAATTACACCTATTCCTTCCCAATTAGCCCAGGGCGGATATTCGTGCGCCTTTACTTCTATCCAGTGGCCTATGGCTACTATGCTTCTGAAGATGCTTACTTTGGTGTCAAAACAAACAATTTGATTCTTTTAGACAACTTCAATGCTTCACAAACTGCTCAGGCAGCAAACTATGCCTACATCCTTCGAGAATTCTCGCTGAACGTCACTTTAGGTAGTCTAGACCTCACCTTTTTCCCATCCACACAGAATGGTTCTTATGCATTTGTGAATGGGATTGAGATTGTGCCCACGCCTGACATCTTCACAACACGAACACCTACACATAACACCGAAGGGAACCTTGATCCATCCGATATAGATTCTATGACCAGTTTCCAAACGATGTACCGTCTCAATGTTGGGGGCCAGGCGATCATTCCACAAGGTGATTCTAGGTTCTATCGTTCATGGGAGGATGACTCTCCATACATATATGGTGCTGCCTTTGGGGTGACCTTCGGCAAAGATAGTAATGTCACCATCACATATCCAGGTACTATGCCAAACTACACTGCACCTGCTGATGTGTATGCAACAGCACGATCAATGGGCCCAAATTGGCAGATCAACCTGAACTACAATCTTACATGGATCTTATCGGTTGACGCAGGGTTTTACTACCTCTTAAGGTTCCATTTCTGTGAGATCCAGTATCCTATAACCAAGATGAATCAGAGGTCATTCTTCATACATCAATAATCAGACGGTGCAGGATCAAATGGATGTTATTCGTTGGAGTGGAGGAATTGGCATGGCAACATATGCTGACTATCTTATCGTCACAGTTGGTTCCGGTCAGATGGATTTGTGGGTTGCACTTCATCCTGATCTTTCAAGTAAACCACAGTATTATGATGCAATACTAAATGGCCTTGAGGTCTTCAAGCTATGGGACATTGGGAAAAAAAACCTTGCTGGGCTTAACCCTCCACTTCCACCACAACCAAAGACTGATGTGAACCCTAAAGGGGTGTCTGGTGGAGGGAAATTAAAGGCTGCTGTCCCAGCAGCCATATGTGCCGTGGTTGTGCTGATTACAGCTTGTTTTTGTGTGTGCATCATCTGTAGACGAAAGAAAGTGGCAAAGCATTCTGGCAAGACTGACAAAAAGTGCTTGACTTATCAAACTGAATTATACAAATCACCATCAAATCTTTGTCGGAACTTCACCTTCCATGAAATGCAAATAGCAACTAGTAGCTTTGATGAAACCCTTCTGCTTGGTAGAGGTGGATTTGGTGATGTGTACCGTGGAGAGATAGATAATGGTACAACGGTGGCGATCAAACGGAGCAACCCATTGTCCCTGCAGGGTGTTCGTGAGTTCCAGACCGAGATTGAGACGCTGTCC
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| CDS seq | ATGACATCCCGTATATTCATTTCAAATTACACCTATTCCTTCCCAATTAGCCCAGGGCGGATATTCGTGCGCCTTTACTTCTATCCAGTGGCCTATGGCTACTATGCTTCTGAAGATGCTTACTTTGGTGTCAAAACAAACAATTTGATTCTTTTAGACAACTTCAATGCTTCACAAACTGCTCAGGCAGCAAACTATGCCTACATCCTTCGAGAATTCTCGCTGAACGTCACTTTAGGTAGTCTAGACCTCACCTTTTTCCCATCCACACAGAATGGTTCTTATGCATTTGTGAATGGGATTGAGATTGTGCCCACGCCTGACATCTTCACAACACGAACACCTACACATAACACCGAAGGGAACCTTGATCCATCCGATATAGATTCTATGACCAGTTTCCAAACGATGTACCGTCTCAATGTTGGGGGCCAGGCGATCATTCCACAAGGTGATTCTAGGTTCTATCGTTCATGGGAGGATGACTCTCCATACATATATGGTGCTGCCTTTGGGGTGACCTTCGGCAAAGATAGTAATGTCACCATCACATATCCAGGTACTATGCCAAACTACACTGCACCTGCTGATGTAGGTCATTCTTCATACATCAATAATCAGACGGTGCAGGATCAAATGGATGTTATTCGTTGGAGTGGAGGAATTGGCATGGCAACATATGCTGACTATCTTATCGTCACAGTTGGTTCCGGTCAGATGGATTTGTGGGTTGCACTTCATCCTGATCTTTCAAGTAAACCACAGTATTATGATGCAATACTAAATGGCCTTGAGGTCTTCAAGCTATGGGACATTGGGAAAAAAAACCTTGCTGGGCTTAACCCTCCACTTCCACCACAACCAAAGACTGATGTGAACCCTAAAGGGGTGTCTGGTGGAGGGAAATTAAAGGCTGCTGTCCCAGCAGCCATATGTGCCGTGGTTGTGCTGATTACAGCTTGTTTTTGTGTGTGCATCATCTGTAGACGAAAGAAAGTGGCAAAGCATTCTGGCAAGACTGACAAAAAGTGCTTGACTTATCAAACTGAATTATACAAATCACCATCAAATCTTTGTCGGAACTTCACCTTCCATGAAATGCAAATAGCAACTAGTAGCTTTGATGAAACCCTTCTGCTTGGTAGAGGTGGATTTGGTGATGTGTACCGTGGAGAGATAGATAATGGTACAACGGTGGCGATCAAACGGAGCAACCCATTGTCCCTGCAGGGTGTTCGTGAGTTCCAGACCGAGATTGAGACGCTGTCC
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| Protein seq | MTSRIFISNYTYSFPISPGRIFVRLYFYPVAYGYYASEDAYFGVKTNNLILLDNFNASQTAQAANYAYILREFSLNVTLGSLDLTFFPSTQNGSYAFVNGIEIVPTPDIFTTRTPTHNTEGNLDPSDIDSMTSFQTMYRLNVGGQAIIPQGDSRFYRSWEDDSPYIYGAAFGVTFGKDSNVTITYPGTMPNYTAPADVGHSSYINNQTVQDQMDVIRWSGGIGMATYADYLIVTVGSGQMDLWVALHPDLSSKPQYYDAILNGLEVFKLWDIGKKNLAGLNPPLPPQPKTDVNPKGVSGGGKLKAAVPAAICAVVVLITACFCVCIICRRKKVAKHSGKTDKKCLTYQTELYKSPSNLCRNFTFHEMQIATSSFDETLLLGRGGFGDVYRGEIDNGTTVAIKRSNPLSLQGVREFQTEIETLS |
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| Function | Receptor-like protein kinase FERONIA [UniProtKB/Swiss-Prot:Q9SCZ4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsN22_05G011270 | OsN22_05G011270_01 | Chr05 | 15090256 | 15094096 | + | NAM | ||
| CDS seq | ATGACATCCCGTATATTCATTTCAAATTACACCTATTCCTTCCCAATTAGCCCAGGGCGGATATTCGTGCGCCTTTACTTCTATCCAGTGGCCTATGGCTACTATGCTTCTGAAGATGCTTACTTTGGTGTCAAAACAAACAATTTGATTCTTTTAGACAACTTCAATGCTTCACAAACTGCTCAGGCAGCAAACTATGCCTACATCCTTCGAGAATTCTCGCTGAACGTCACTTTAGGTAGTCTAGACCTCACCTTTTTCCCATCCACACAGAATGGTTCTTATGCATTTGTGAATGGGATTGAGATTGTGCCCACGCCTGACATCTTCACAACACGAACACCTACACATAACACCGAAGGGAACCTTGATCCATCCGATATAGATTCTATGACCAGTTTCCAAACGATGTACCGTCTCAATGTTGGGGGCCAGGCGATCATTCCACAAGGTGATTCTAGGTTCTATCGTTCATGGGAGGATGACTCTCCATACATATATGGTGCTGCCTTTGGGGTGACCTTCGGCAAAGATAGTAATGTCACCATCACATATCCAGGTACTATGCCAAACTACACTGCACCTGCTGATGTAGGTCATTCTTCATACATCAATAATCAGACGGTGCAGGATCAAATGGATGTTATTCGTTGGAGTGGAGGAATTGGCATGGCAACATATGCTGACTATCTTATCGTCACAGTTGGTTCCGGTCAGATGGATTTGTGGGTTGCACTTCATCCTGATCTTTCAAGTAAACCACAGTATTATGATGCAATACTAAATGGCCTTGAGGTCTTCAAGCTATGGGACATTGGGAAAAAAAACCTTGCTGGGCTTAACCCTCCACTTCCACCACAACCAAAGACTGATGTGAACCCTAAAGGGGTGTCTGGTGGAGGGAAATTAAAGGCTGCTGTCCCAGCAGCCATATGTGCCGTGGTTGTGCTGATTACAGCTTGTTTTTGTGTGTGCATCATCTGTAGACGAAAGAAAGTGGCAAAGCATTCTGGCAAGACTGACAAAAAGTGCTTGACTTATCAAACTGAATTATACAAATCACCATCAAATCTTTGTCGGAACTTCACCTTCCATGAAATGCAAATAGCAACTAGTAGCTTTGATGAAACCCTTCTGCTTGGTAGAGGTGGATTTGGTGATGTGTACCGTGGAGAGATAGATAATGGTACAACGGTGGCGATCAAACGGAGCAACCCATTGTCCCTGCAGGGTGTTCGTGAGTTCCAGACCGAGATTGAGACGCTGTCC
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| Protein seq | MTSRIFISNYTYSFPISPGRIFVRLYFYPVAYGYYASEDAYFGVKTNNLILLDNFNASQTAQAANYAYILREFSLNVTLGSLDLTFFPSTQNGSYAFVNGIEIVPTPDIFTTRTPTHNTEGNLDPSDIDSMTSFQTMYRLNVGGQAIIPQGDSRFYRSWEDDSPYIYGAAFGVTFGKDSNVTITYPGTMPNYTAPADVGHSSYINNQTVQDQMDVIRWSGGIGMATYADYLIVTVGSGQMDLWVALHPDLSSKPQYYDAILNGLEVFKLWDIGKKNLAGLNPPLPPQPKTDVNPKGVSGGGKLKAAVPAAICAVVVLITACFCVCIICRRKKVAKHSGKTDKKCLTYQTELYKSPSNLCRNFTFHEMQIATSSFDETLLLGRGGFGDVYRGEIDNGTTVAIKRSNPLSLQGVREFQTEIETLS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.000000 | 0.506803 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_05g0317700 | RBH | 1.310926 | 2.110798 | 1.451446 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g25350 | RBH | 0.914433 | 1.214943 | 0.376086 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os05g0317700 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_05g0011550 | RBH | 0.255591 | 6.578043 | 2.748529 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_05g0011570 | RBH | 0.242996 | 2.241937 | 0.344111 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_05g0011510 | RBH | 0.621942 | 8.032750 | 2.556405 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_05g0011580 | RBH | 0.127035 | 0.048638 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_05g0011570 | RBH | 0.464674 | 0.0 | 2.240625 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_05G0216900 | SBH | 0.1448025 | 0.0065795 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_05g0011320 | RBH | 0.000000 | 0.324691 | 0.221055 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_05G0226700 | SBH | 0.3229385 | 0.0415805 | 0.1131095 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0011500 | RBH | 0.037267 | 0.054660 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_05g0011420 | RBH | 0.000000 | 2.429005 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_05g0011550 | RBH | 1.059704 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_05g0011570 | RBH | 0.063013 | 0.000000 | 0.170789 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_05g0011580 | RBH | 0.266067 | 1.907583 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_05G011280 | RBH | 0.127635 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_05g0011570 | RBH | 0.332126 | 4.227867 | 1.678961 |
