Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsN22_04G021670 | OGI:04082520 | 16/16 | N22 | OsN22RS2 | Gramene(+IsoSeq) | Chr04:26821085-26824312 | ||||||||
| Gene Symbol | SPL7, OsSPL7 | ||||||||||
| DNA seq | TTACAACCGCCGCCGCAGCCTTTTTCCCAATCGGCGCTAGTTTTCGATCCGCCGCCGTCGGCCGGAGCGAAGCCAAGCCCGCGCGACCAGGTGGCTGCTGCTGTGTAACGACGCTAGCTAGCTTAGCTGAGGTACGTTTACACATAGGTCCGTCCGTGTGCGGCTGCCACCATGGAAGGAAACGGCTGCGGCGGAAGCGGGGCGACACCACGGGGTGTCGTTGGGATGCACTGGGCTCCCGTCGTCACCTCGCCGCCTAGCCCGCAGCCGCCGTTCCTCCCGCCGGCGCCATGCAGGCCCGACGTCCAGATGCAACAGCAAGGCGGGCTGACCTGCCTCAAGCTCGGGAAGCGGCCGTGCTTCTGGGGTGGCGACGGCGCCGGCCAGGTGGCGCAGGGGAGCGGCGGCGGCGGAGGCGGAGGCGGTGGTGGTTCCGCGGATCAGGGGAAGAGGAAGGAGAAGGCGGCGACGGCGGTGCCGGTGGTGCCCCGTTGCCAGGTGGAGGGGTGCGACATTACGCTCCAGGGAGTCAAGGAGTACCACCGGCGGCACAAGGTGTGCGAGGTGCACGCCAAGGCCCCGAGGGTCGTCGTGCACGGCACCGAGCAGCGCTTCTGCCAGCAATGCAGCCGGTGCGTCAATCACCACGATCTACGTCACATGTCTAGCTCTGCTACACGCGTGCTCATAGCGGTCTTTCACTTGTACGCGCAGGTTCCACGTGCTCGCGGAGTTTGACGACGCCAAGAAGAGCTGCCGGCGGCGGCTGGCCGGGCACAACGAGAGGCGGCGGAGGAGCAACGCCAGCGAGGCCATGGCCAGGGGCTCTGCGCACCCACACGGTATACACAAAACAAACTCCTCCCGTCCCGGCCGTAACAGTTCCATTAATCATCATACTACTAGTACGTGTAGTACGTACGTACTACTCCCAGTAATAGTTAGGGAGACCAATGGAGAGGCAGGTTAGCTGCACAAACAGGAGCGTACCACTCCCAGTAGTAGGAGTACTGGTTGGTTTGATGCCGGGAAACAAGGGGAGAGCTGCAGGTGCGCACCAAAAAGCTCATCGGGATGTGTGAGACGCTGAGAGCACAGATTTTAATGCACGACTTTATGTGCACTGCCCTGCCTGCCTGGCCGGCCCAGCCAGCCTGCTTGCTTGGAGTGGCAGTGGCTGCGTGGCCACTGGCCAGGCCGACCGTGCATATGATCACCATGGCATCAACAGGAACCCGCGCGCCGGGTGGTCGCTGCGCACGCAACACGGCAAACAGTGGTTTCATCCATCCATCTTCCACTCCTTATCAAGAGCCTGTATGCTTACGGAAATCTATACTACTACGTACTAGTACTACTACTCCAGTACGCATGTACATACATACGCGTACAACTGTACAGTTAATTACGAATAGTTACTGTACGAAGGTATAGTGCTATAGCGGGACTGGCCGAAAGACTTGGACATACGGCGGTCGAATTTCATAGCGGCATTCTAGGATATTCAAGCGTGTATTGATTGATATTGATATGCTTGCATGAGTATAGTTGTACTACTGACCTTCAAAGGTAAGCACGGCTCTGCAGTTCAGAAACCTTGTATATATGTATACTCCTTTTGTCCCATAAAAAAACAATATAGTGCCAGATATGACTCATTGTAATACTACGAATTTTGATATACATCTGTCCAGATTCATAGATTTATTTTTATAGGAAGGAGGGAGTACTCCTTTTAGTCTACCACTACCTTTCTCTTGTTCTGAGAAACTATTACTCCTGCAGTAGAAAATACAGTACATGGTACTCCTGCTGCACTGACATAGATCCTGTAGATGAACATGCCTTATATTCTGTGATAACTTATGTACTCCAGTATTTATGTGGACTTTGATTTGGAGTAGGTCCTTCTGGCTGTCTTACAGAGAAATATTATGGAATGCAAGATTTAAGTTAGTTGCCTCAAACAATAAAGACATTAACAATCGTAACCACCACAAACTTTCGTGTCAACATAATCAACAACAGCATAATGGGCCTATCTTGGTTAACAATAACATTAGTACGTATTACCATGGACCTAAACTTGACATCAAGGTCGAGTGCACGTTTTTACTATGCTAGTGACCCAAAGCCCATCAGCATTATTGACCACTTGAAACCTGTTATTTGATCAACACATAGACATGATGTTGTGGAAGATCAGGTAGCGATCAGTTTGTGTAAAGATATATAGTATAGTATCAATTAGTTGTACCCGGTGAACATGCATGGTTGGTTGGTTTTAAACTTTGTAAATTTGGTTGCAAATGATCAGGGCAAGCATGCAAAAATGATTGCGGTTGAGTAACCACTTCGTTATTAGGACTGATGGTGTGCATTATGCTTTCTTGATATGACTATAACAGATGGCCACATTTCTGTAGGCACAATGATATGCATAATAACGTGTGCGACGTTGTTGTTGCAGGTATGCCGGTGCTGGGACACGGTTTCCCGCCGTACGGCCTGCCGACGTCGTCGGCTGGTGCTCTCTCTCTTCTGTCATCGGCTAGAGCCACCGGCCCATGGCTGATGCCGACGCCCGACATCTCCGCCCGCTCAAGCGCGGCGCTCGACGAGCTCATCGCCGAGAACCGCGCGGCCCTCCTCTCGTGGCAATTCTTCTCCGACCGACAGCCGCCACCAGCTGGCCGTCCAACGGGCCGCAGCCCGGGCTCCGAAACGGCCGGTGGCTGGCACGCGCACCTGCAGGCGCCGCCGCCACCGCCCGGCGCCGGAGGGCAGCACGAGCATCAGTCGGGGCACGTGACGCTCGACCTCATGCAGGCCACCACCGCGGCAGGAGGCAGCGGCGCGCCGTTCCGGCCCGTGCCAGCGAGGCCCGCCAAGGAGGGCGGCGACGCCGGCTGCACCTCCGACGCGTGGACGCCGTCGCCCATGGAGGGCGCCCGCGTGGTCTGAGTGTCCGACCTGCCAGCCGCGACGTCGCCGCGCGTGCACCACGGTCCCTAGCTCCCGTGTCAGCTGGGCGTGGGAAGCGATCGATCAGTGGTGGGCGCGCGCGCACGGCTGGAGTTCTGTCCCGACGCCGCGCGCAGCCGTGCAATCAACTTGAGTTCGTTGGACAATAGTGTCTCGTCTCGTAGCAATCTATCCCGATGTAGCAGTACTGGTGCAGTGGTGGTGGTGGTGCCACTAGCTAGCAATGTTCTATTTTTTCGCTCT
More
|
||||||||||
| CDS seq | ATGGAAGGAAACGGCTGCGGCGGAAGCGGGGCGACACCACGGGGTGTCGTTGGGATGCACTGGGCTCCCGTCGTCACCTCGCCGCCTAGCCCGCAGCCGCCGTTCCTCCCGCCGGCGCCATGCAGGCCCGACGTCCAGATGCAACAGCAAGGCGGGCTGACCTGCCTCAAGCTCGGGAAGCGGCCGTGCTTCTGGGGTGGCGACGGCGCCGGCCAGGTGGCGCAGGGGAGCGGCGGCGGCGGAGGCGGAGGCGGTGGTGGTTCCGCGGATCAGGGGAAGAGGAAGGAGAAGGCGGCGACGGCGGTGCCGGTGGTGCCCCGTTGCCAGGTGGAGGGGTGCGACATTACGCTCCAGGGAGTCAAGGAGTACCACCGGCGGCACAAGGTGTGCGAGGTGCACGCCAAGGCCCCGAGGGTCGTCGTGCACGGCACCGAGCAGCGCTTCTGCCAGCAATGCAGCCGGTTCCACGTGCTCGCGGAGTTTGACGACGCCAAGAAGAGCTGCCGGCGGCGGCTGGCCGGGCACAACGAGAGGCGGCGGAGGAGCAACGCCAGCGAGGCCATGGCCAGGGGCTCTGCGCACCCACACGGTATGCCGGTGCTGGGACACGGTTTCCCGCCGTACGGCCTGCCGACGTCGTCGGCTGGTGCTCTCTCTCTTCTGTCATCGGCTAGAGCCACCGGCCCATGGCTGATGCCGACGCCCGACATCTCCGCCCGCTCAAGCGCGGCGCTCGACGAGCTCATCGCCGAGAACCGCGCGGCCCTCCTCTCGTGGCAATTCTTCTCCGACCGACAGCCGCCACCAGCTGGCCGTCCAACGGGCCGCAGCCCGGGCTCCGAAACGGCCGGTGGCTGGCACGCGCACCTGCAGGCGCCGCCGCCACCGCCCGGCGCCGGAGGGCAGCACGAGCATCAGTCGGGGCACGTGACGCTCGACCTCATGCAGGCCACCACCGCGGCAGGAGGCAGCGGCGCGCCGTTCCGGCCCGTGCCAGCGAGGCCCGCCAAGGAGGGCGGCGACGCCGGCTGCACCTCCGACGCGTGGACGCCGTCGCCCATGGAGGGCGCCCGCGTGGTCTGA
More
|
||||||||||
| Protein seq | MEGNGCGGSGATPRGVVGMHWAPVVTSPPSPQPPFLPPAPCRPDVQMQQQGGLTCLKLGKRPCFWGGDGAGQVAQGSGGGGGGGGGGSADQGKRKEKAATAVPVVPRCQVEGCDITLQGVKEYHRRHKVCEVHAKAPRVVVHGTEQRFCQQCSRFHVLAEFDDAKKSCRRRLAGHNERRRRSNASEAMARGSAHPHGMPVLGHGFPPYGLPTSSAGALSLLSSARATGPWLMPTPDISARSSAALDELIAENRAALLSWQFFSDRQPPPAGRPTGRSPGSETAGGWHAHLQAPPPPPGAGGQHEHQSGHVTLDLMQATTAAGGSGAPFRPVPARPAKEGGDAGCTSDAWTPSPMEGARVV |
||||||||||
| Function | Squamosa promoter-binding-like protein 7 [UniProtKB/Swiss-Prot:Q01JD1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsN22_04G021670 | OsN22_04G021670_01 | Chr04 | 26821085 | 26824312 | + | NAM | ||
| CDS seq | ATGGAAGGAAACGGCTGCGGCGGAAGCGGGGCGACACCACGGGGTGTCGTTGGGATGCACTGGGCTCCCGTCGTCACCTCGCCGCCTAGCCCGCAGCCGCCGTTCCTCCCGCCGGCGCCATGCAGGCCCGACGTCCAGATGCAACAGCAAGGCGGGCTGACCTGCCTCAAGCTCGGGAAGCGGCCGTGCTTCTGGGGTGGCGACGGCGCCGGCCAGGTGGCGCAGGGGAGCGGCGGCGGCGGAGGCGGAGGCGGTGGTGGTTCCGCGGATCAGGGGAAGAGGAAGGAGAAGGCGGCGACGGCGGTGCCGGTGGTGCCCCGTTGCCAGGTGGAGGGGTGCGACATTACGCTCCAGGGAGTCAAGGAGTACCACCGGCGGCACAAGGTGTGCGAGGTGCACGCCAAGGCCCCGAGGGTCGTCGTGCACGGCACCGAGCAGCGCTTCTGCCAGCAATGCAGCCGGTTCCACGTGCTCGCGGAGTTTGACGACGCCAAGAAGAGCTGCCGGCGGCGGCTGGCCGGGCACAACGAGAGGCGGCGGAGGAGCAACGCCAGCGAGGCCATGGCCAGGGGCTCTGCGCACCCACACGGTATGCCGGTGCTGGGACACGGTTTCCCGCCGTACGGCCTGCCGACGTCGTCGGCTGGTGCTCTCTCTCTTCTGTCATCGGCTAGAGCCACCGGCCCATGGCTGATGCCGACGCCCGACATCTCCGCCCGCTCAAGCGCGGCGCTCGACGAGCTCATCGCCGAGAACCGCGCGGCCCTCCTCTCGTGGCAATTCTTCTCCGACCGACAGCCGCCACCAGCTGGCCGTCCAACGGGCCGCAGCCCGGGCTCCGAAACGGCCGGTGGCTGGCACGCGCACCTGCAGGCGCCGCCGCCACCGCCCGGCGCCGGAGGGCAGCACGAGCATCAGTCGGGGCACGTGACGCTCGACCTCATGCAGGCCACCACCGCGGCAGGAGGCAGCGGCGCGCCGTTCCGGCCCGTGCCAGCGAGGCCCGCCAAGGAGGGCGGCGACGCCGGCTGCACCTCCGACGCGTGGACGCCGTCGCCCATGGAGGGCGCCCGCGTGGTCTGA
More
|
|||||||
| Protein seq | MEGNGCGGSGATPRGVVGMHWAPVVTSPPSPQPPFLPPAPCRPDVQMQQQGGLTCLKLGKRPCFWGGDGAGQVAQGSGGGGGGGGGGSADQGKRKEKAATAVPVVPRCQVEGCDITLQGVKEYHRRHKVCEVHAKAPRVVVHGTEQRFCQQCSRFHVLAEFDDAKKSCRRRLAGHNERRRRSNASEAMARGSAHPHGMPVLGHGFPPYGLPTSSAGALSLLSSARATGPWLMPTPDISARSSAALDELIAENRAALLSWQFFSDRQPPPAGRPTGRSPGSETAGGWHAHLQAPPPPPGAGGQHEHQSGHVTLDLMQATTAAGGSGAPFRPVPARPAKEGGDAGCTSDAWTPSPMEGARVV
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0551500 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g46580 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0551500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0022230 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0022970 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0022690 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0022450 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0022590 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0435200 | RBH | 0.249187 | 0.054808 | 1.7243255 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0021420 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0436300 | RBH | 0.135188 | 0.0095035 | 6.4483695 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0021920 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0021750 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0021840 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0022260 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0022450 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0021590 | RBH | 0.0 | 0.0 | 0.0 |
