Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsN22_04G003170 OGI:04016940 | 3/16 N22 | OsN22RS2 | Gramene(+IsoSeq) Chr04:4926366-4933546
Gene Symbol -
DNA seq

TCACGGGGTTGTCTGAAAAAAAAGCAAAAACCTAGGGAGTCTTTCATTACATATGCCTCGAAACCTAGAAATTTTGTAACATTTCCTTGATATTTTCGGCAACCCACTGTAGTTCTATCTAGTTTAAAACACTAGTTACTTGGGGGATGATTACGAATTGAAGAGTTGAACATTGTGTGGTTCAATTTAGTACCAAAAGATATGAAAATGACTCGAAAGATGGCTAAGAAATACTACCCATATAGTTTTTCTATGTTGGTTTTACATGCAGGTGTGAAACATATAGCTGGAAATATGTTTGAGAGCATATCTAATATTGGAGATGCAATTTTCTTAAAGGTATGGTGAACAACATACAACAGTTCCTTCTCTATGAATTCAATATCTATATTAAAAACTAAGATAGCATGGTGGTCATAATTTTTGGTTGAATCAAATGACTTTATCATATATATTACAGAATAAAAACAAATGTTTGTCAAAATATATGTACAGATGATCCTCCACATGCAAAACGATGAGGACTGCATCAAGATCCTCAAGAATTGCCACCAAGCCCTGCCGGACAATGGCAAGGTGATTGCTGTTGAGATTGTCCTCCCGACGATCCCAGATCTGGCCCAAACAGCACGATACCCGTTCCAGATGGACATGATCATGCTCAGGACAGAGCTGGAGTTCGCCAAGCTAGCCACGGACTCTGGTTTCAGTGGTGCCTTGCGAACAACCTACATCTTGGCCAACTATTGGGTTCTTGAGTTCAGCAAGTAGCTCTGAAAAATCATGTCAAGTTCAATTTGCTAAGCATTTTAATGTGTGCATGGTTATTTCAATACCATACAAATGGTGATCAGAATCGCTATATATACTGAACAATATATGTCAAATATACAATATAAAATGTAAAGTGTCCCTTAAAATTGAACAATATTGTACATATGTTTCAGCATTGCTAATAAAAGCATCCAACTCAGGTTATGGCTATACTGAGTAGGGCTGAATAATATGGTTTGGCTCATTAGGATAAGGAGTTGGCTCAGCTCAGTTTGCTATCCTAAGGCTTAACAAGCTAGACAACCAGCTTTCTCGTCTTGTTACAAGTCTCGACCTAGCTCCTTAAGCTCATGAACCAGAGCAATAAAAATCAGCTCAAAATCCATCTGTGTTGACAACGATGGCCTCTTCAAGTATGGCACGTAAAACAAGAAAAGTCATTAGCGTGTGATTAACTGTAATATCATACTAGATGATTCCCCACGCGTTGCAGCGGAATTTACAGAAAACAAAATGTACATAGCGTAAGCTTGACAAATGAAAGGAGAAAAAAATTGAAAGCAAGTTAAGGGGCTATGTTCTTCTCATAGATTATCTATGCAAACTAACTCCTCGAAGACAACTTTAAAATGTATATGACATACTGCCCATACGGATAGCTTTATGACCAAAACAGTAAAAGAACGATTGTTCTTAGTTTGATATGCTGATTGTTCTTAGTTTGATATGCTGTACAGAGAGCAACAAAGTAAAAAACTTCAAGTGCTTTCTGAACCCTTATTATGGATGAGCTTCATGGAACCAATCGCCTGCTGTCACAATATCATCGAGCAAACCCATTTCGACTCCTGAGCATATCTGGTAATTGTATCTCAGCTAGGTCATGTAAAAGGAACCCTAAATCGTGCCTCCATATAAAAAATTAGTTCTATAAAGTGAGGGCACAGAAAATATCATTGACCTTTTTAGATTGTCCTTTGCAACCAAGTGTCAGTGATAAGACTGAAAGGATGAAAGTTGAAATTTTAGTAAGAATAAGAATATGCAGTGCACTAAGCAAATGGGGTAAATGAAAATAAAGATCCAATATGCGATACCTTAATAGTCATGAAATAATCGAAAAAATAGAGTGAAATCTTGTACTTACCAATTGAAATAATCGAATAGTCATGAATTATTTAATTTCTCTAGAGCATAATATACTTGTGACATCCAACCAATAACATAATGTGAGCATTGATAGTTGATCTCTAGCAATATCTAAGACGTTAACACTTATTTCTTCTCCTGAAAACAGTTCTCAAAATTAGTGTTACTAATTCTTGCAGAAGAGAAACTCAATTCCTCGGCCGATCAAAATAACTTACTTTATTTGCTGATACAACTCCATCTCTAGAAATAACAAATTCTTCTTAATTGTCTCCAACTTTGGTATAGATGTTATAGAAAACTATTTCTGGCAAAATGAAATAAGGAACCAAATGCAGCTATACACCTGAACTTAGATGACAAAAAGTGTGCAGCATGCTTATGCTTACTCGATAGGGAATTAGGGGTTTATATAGAACATCACATTGATAGATCTGCTAGAGACTGGTAGTAACAGAGGATCCTATCAACTCCTTTCTGCAGTCCAAAACCCAAAATACTGATAAGCAAGAAAAGAACATGCGGACAATAACGTGTTGCATTGCTGTAGTACATACCAGAAGGTTGACACAATACAACAGTTTGACAGCAAGAGAATGAACAACCTTGTCTTTTCATCGTCTCACATTTACAGGAGTTGCAGCCATTGGCGTGATGAATAGATGTTGACTTGAAGATAAAATCCAGTTATGGAGTGATGACTCTTCAGATAATTACTTCTATGCTTCCGTTTCCTTATGGAGTGATGGAGCAGCTCCCAGAGAAAGCGATCAGCCTAGCCGGTTCAGGTTTTGTTCGACAGCAAGCCAGAATTGTTTCAGCGTTTATGCTTTATAGCGAACAGATGATTAGGGAAAACCAAAACAGGAAGGGAAGATGATGATATACCAAGTAATGCCAGATTGATACATTTATTCATTGCTTTAAAAGTGAAATACTCTTCCTATTTAGGATTAAAGAAACTAAACAAAAAGTACATTGAAAGCTTGAAGGGTACGTGGGAAACCATTGTATCAGAAACGGTGTTGTCTATCGAAGCCTTAAAGGATCTCTGATATTGAAAGCTTTTGTAAAGTTTAGGCATACCATAGGCAAAGTCAAACAAATAAATAGTAATTTGTTAAAAGAAAAATACTTGAGAAGGGAACGTATCTTACATCATAAACATATATCTGCACAAAATTGCATGAGCTATCATAGATTCTAATGCCCTGGCCCCTGGGCTGTCCAACTAAAGACCTGAACACACCAATCACAACAGGGAGCAAAGATCTGAACATTAGTCAATCCCAATATAGAGCAATTTTACGGTCCTTGAGAAGGTACCATGAAGTAACATTTTTTCTATTGTAAATTTGGTATCTCATGGTACCTTTTTTTAGATAATGGAAATGTGTTACATCTCCGGCCTCTGCCTGTAGGCACACAGCCAAAAAATTCAGACGTGAACAGAAAAGTTAAAAAAGGCGAGATGGGACAAACCCCCAACTTCTGCCGATGATATGATCTACTAAAATAATATTTTTTTTCAAAATCATGTAGATTCTATCACGAAATTCTGTAGTTACTACGCCATCCAAAATGGAATAAAAGTTCCTTGGCTACTAATTCCAAGCGTGTAGCACCATTGCGCATAGTATCTTGTTGTTCCTGTGAAAGCATCATACACCAAGAGTGGAGCCAATTGGAACACATGAAGATAACATGCATGATGTTAGGCATTTATTTATGGTTAAAAAATATATCATTACGGCAACACCAAATTGACCAACATAAAGCACTAGCTCCAAACAAAATCATTTTTTTGTGGGTCTAGGCACTCCCCTTAGCCAGTCACCAAATATATCTTTTGCATTGTGGGGAGGGGGGATGTTGAAGGCAAAGAAGACACATCGCCAAGCAAAATGTGCAACATGACAGTCAAAGAAAAGATGTTGGATGGTCTCTTGTGTATTACAAAAACAACATTGCTTGTTTCCCCTCCAATTTCTCTTTATGAGATTATCTTTTGTCAAGATTACTTTTTTGTGAAGAAACCACATAAATACTTAGATTTTTAGTGGTACCTTTACCTCCCATAAGATCCTCTTGTGGATTCTTACATTGGAATTGATGATCGCATTATACATGGATTTGACCGAAAAATGGCCATTTTTATGTAGCGACCAAATAAAGCAATCCTTTTCATTTGGCAAGGTTATGTTAGCTAGTCGAGAGATCAGATCGTTCCACTCAACTAACTTTGGTCCTACAATTGATCGTCGGAATGAAACATTCAACGGTGTTATGCTCATAACTTCTGCCAAAGTAGAATGTCTTTTTCAGACCACATTGTACAGAGAAGGATATTGATATTTGAGAGGTTGCAAGCCCAACCATGTATCTTCCCAAAATCTTATTTCCATCCCATTACCAGGTTTAAAAGATCCATACTGAAAAAATTGATCTTTTACTTTCATTAGGCCAGCCCAAAATTAGGATGTTCTTGGTTTGTGTGACATGTGGGAGAGGGGTTTACCCTTTAAGTACTTGTTGCGCAAAAGGTTTTGCCATAGGCCATCACCATTAAGAAGCTTGAATAGCCATTTGCTCAACAAACATCTATTCATGATATCAAGATTTAGGACACCCAGTCCACCTTGATCTTTTGGCCGGCATATATAATCCCATTTTGTTAACCTATATTTCTTTTTCTGGCTATCACTGCTCCAAAAAAAGCTCGATCGGTAGTAATCTAGTCTTTGAAGTACACCTCGAGGTATTTCAAAAAAGGATAACATGAACATGGGAAGACTCGAAAGAACCGAGTTAAGAAGAACCAATCTCCCACCATAGGAGCTGTTTTTGCCCTTCCATGCGCTAAGTTTTCTTTGAAACCTATCCTCCACATATTTCCAATCAGAATTTCTGAGTTTTCGATAGTATATGGGGATTCCTAAGTATTTGAATGGAAAGGAACCAGAATTACAACCAAACAGTTGTCTATATTGGTCCTCCATTTCCTTGGCTCCCCCAAAGCAGAAAATTTCACTTTTATGAAAGTTTATTTTCAGCCCCGAGAGATGTTCAAACACACAAAGAATGGCCTTCATGTTTTTTGCTTGTTCAAAATCATGTTCAAGAAATATTATTGTATCGTCGGTATATTGGAGAATGGACAAACCATCATCCACTAAGTGTGGAATTACCCCTCTAATTTGGCCATAGACTTTGGCTCTTTCAATAAGAATGGCTAACATATCAGCCACTATGTTAAAAAGAATTGGGGACATTGGATCCCCTTGTCTCAAGCCTTTGTATGTCCGGAAATTTTTTCCTACATTATCATTGACTTTGACACTTACAGTTCCTCCTTCAACCCAGTTGGAAATCCAATTGCACCACGATTGTGAAAACCCTTTCATTCATAATGTCTGCTGAAGGAACTGCCATTTAACTTTGTCATAAGCCTTTTCAAAGTCAATTTTGAATATGATACCATCCATTTTCTTTGTGTGTAACTCATGGACAGTCTCATGCAAAATCACCACCCCTTCCATGATATTTCTATCTGGCAAAAACGCCGTTTGGGTTGGGCGAATGACTTTGTGAGCAACCGTTGTAATCCTATTGGTGCCCACTTTTGTAAAAATTTTAAAGCTGACATTTAGTAGGCAAATAGGCCTATATTGTTGAATTTGATTTGCATCTGCCTTTTTTGTCAGTAGCACGATGATCCCAAAGTTTAGGTTATAAAGGGATAATGTCCCTTTATGAAATTCTCTAAATAGAGCCATGAGATCATTCTTAACAATCTCCCAAAAGACCTGATAAAACTCTGCTGGAAAGCCATCTGGACCTGGGGAGGAGTTATGATCCATTTGAAAAATTGCCTCTTTGACTTCCTTTTCTGAAAATTCAGCAGTAAGGATGTTATTTTCCAAGTCGGACACTTGAGGAATATCATCAGTTCATCCCTCTATCATGAGGTACCTAGGTACTGTAAGGTACCATGAGGTACCAAAATTTACACTAAATTTTTGGTACCTCGTGGTACCTCCTCAAGTACCGTAGAATTGCTCATGAAATTAAGTAAAACACAGTTTTATATATGCATAAGAAAGATGGACATACATGGATATAGATGCTCGTCATGTGACGAACAATCATCAGCCATAAATAAAACCAATCGGTTAGGGTCAAAACCATCAGAAATTCAGCATCACCGAGGATGAGACAAAGAGCAATAGTTGTATGCACTTGCTGCTTGACTGCATCAAACGGCTGGTTAGCATGTTGCTGGAGCCTGGAGCCCTGGAGCACGAAATCCTCTACTTGAACACCAAATAATCCAAAATTGAGATCTACGCAAAGAAACAACACAAAACGTAGGGGAAACCATAAATCTGCCCCCTGATGAACTTGGTGTCCGACGACAGCGACGCTGCCAGTGGCCGGGAACCGGAAGGGGCAGAGAAGCGAGTAAATCAAACTACAGGGTGGGTGACCTTTATTACGGGCATGGTTTCTGGTGATTGATGGTCAATGATTTATAGTGTGGGAGGCAAAGAGGATGCAGGAAGGGGAGACGAATCGTGCGAGACGACGGGTGCGGAGCGACAACGGTGAGATCAATGGGGGTGAAGTGGATGCGGGAAGGAAAGACGAATCGATGCAGGAGCAGGACACTCATTACTCGTGTGAGTTGTGGGACAGCGATCTCGGCGGTCCGGGAGAGGAAGAGGTGGGCGCCTGCAGCTAGGGGACGCGATGCGGTGCGGCCGTGCGTGTGGACGATCGATCGCTTGATTGAGATCGAATGATGGAGACAGAATGGGGTGACGTGGAAGCACCAGGAAACAGAGAATTCCAGTAGTGGGGATGATTTGTATAGGTATATAGGATTCTATCCATTGCGGATAAGGATAATTTGGTTCGAATGTACTGATAAATGCACTCAAAGGATTGGTAGTGGCGTATTTCTTCAAATAGATGTAAAATTATAATGTTGTGGTTACATATACGCAAATACTAGTGATACTTTTCAAAATCAATAATGTTTTAATGGTATCGATTCAATTAACCCATCTCTATATTGCCATGTCCTCCCCATCCCCGCCATGCCATCGCCGTCTCATCGTCTCCATGCGGCGGCACAATCCTACCGGAACCGGTACATCAGATCCATTGAACAGCTCGGATCCGGAGCGAGGTAGGCAGAGGTGTAAACCTGGCGACACAATCGCCTCTACCGACAACAGTGAGCCATGATCAGCCAT

More
CDS seq

ATGGCTGATCATGGCTCACTGTTGTCGGTAGAGGCGATTGTGTCGCCAGGTTTACACCTCTGCCTACCTCGCTCCGGATCCGAGCTGTTCAATGGATCTGATGTACCGGTTCCGGGCTCCAGGCTCCAGCAACATGCTAACCAGCCGTTTGATGCAGTCAAGCAGCAAACAACCCCGTGA

Protein seq

MADHGSLLSVEAIVSPGLHLCLPRSGSELFNGSDVPVPGSRLQQHANQPFDAVKQQTTP

Function -

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsN22_04G003170 OsN22_04G003170_01 Chr04 4926366 4933546 - NAM
CDS seq

ATGGCTGATCATGGCTCACTGTTGTCGGTAGAGGCGATTGTGTCGCCAGGTTTACACCTCTGCCTACCTCGCTCCGGATCCGAGCTGTTCAATGGATCTGATGTACCGGTTCCGGGCTCCAGGCTCCAGCAACATGCTAACCAGCCGTTTGATGCAGTCAAGCAGCAAACAACCCCGTGA

Protein seq

MADHGSLLSVEAIVSPGLHLCLPRSGSELFNGSDVPVPGSRLQQHANQPFDAVKQQTTP

Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.000000 0.000000 0.0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) NA NA NA NA NA
Nipponbare | IRGSP 1.0 | MSU NA NA NA NA NA
Nipponbare | IRGSP 1.0 | RAP-db NA NA NA NA NA
Azucena | AzucenaRS1 | Gramene(+IsoSeq) NA NA NA NA NA
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) NA NA NA NA NA
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) NA NA NA NA NA
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) NA NA NA NA NA
PR 106 | Os127742RS1 | Gramene(+IsoSeq) NA NA NA NA NA
Minghui 63 | MH63RS3 | HZAU OsMH63_04G0076800 RBH 0.003815 0.001677 0
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) NA NA NA NA NA
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_04G0077800 RBH 0.1589145 0.0327215 0.087542
LIMA | Os127564RS1 | Gramene(+IsoSeq) NA NA NA NA NA
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) NA NA NA NA NA
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) NA NA NA NA NA
LIU XU | Os125827RS1 | Gramene(+IsoSeq) NA NA NA NA NA
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) NA NA NA NA NA
N22 | OsN22RS2 | Gramene(+IsoSeq) NA NA NA NA NA
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) NA NA NA NA NA
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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