Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsN22_04G001590 | OGI:04006410 | 16/16 | N22 | OsN22RS2 | Gramene(+IsoSeq) | Chr04:2144797-2146087 | ||||||||
| Gene Symbol | RLCK128, OsRLCK128 | ||||||||||
| DNA seq | TGGATAAGGATTCTAAAAGTCTTTCACAAGGGAACAGCCGGCGCCAGGCGGTTCGAGTACCATGAGCTGGCCACCGCAACAGAGAATTTCTCCGACGATCGCAAGCTCGGGGAAGGCGCATTTGGGGTAGTCTATAGTGGTTTCCTGAAGCAGCTGGAGCGTGAGGTTGCTGTGAAGAAAATAGTGAGGGAGTTCAACGTAGGACACAAGGACTTCTTCAGCGAAGTGATCACCATCAGCGAAACCAGGCACAAGAATCTTGTTAAATTCTTCGGTTGGTGCATCCGGCTGAGACATAGCTGGAACATCCTTCAATTCATGTGCGGCTGGTGCTGTAACATGGAGAACAAGGAGCTTTTTCTTGTCTACGAATTGATGAAAAATGGCAACCTCCACGAGTACTTGCACGAGAGCGAGGTAGCAGCAGTATGATCATGGCCTACGAGGTATGCAACACATTATTGACAATTCATTACTAATTCAATCAAATGAGATAAACGGTTCTGATTGCTTTCTAATAACTGTAGAGAGCAACGTAGTGAGACTCTATTGACAAATATGTTACTATTTTCAATATATCTAGCTAACTAATTATATCCTATCGATGATCAGGTACAAAATAGCCAAGAATATTGGCTCGGCTCTATTCTACCTACATCATGACTGCAATCCATATATCCTGCACAGAGATATTAAGCCAGGCAATATACTCTTAGATGAGAATTTTAATGCCAAGCTTGCTGATTTTGGTTTGTCAAGAATTGCGAACCCGGACAACAATGCAATGTTGCAAACAACTGTGGTAGGCAATGCAGAAGAGTATGTAGGTGTACAGACAATTGCCGTAGGCACGGAAGGGTACATAGATCCACAGTGCAAGAAAGATGGCACGGTCAGGTTCAACTGCCTCTCAGATGTGTACAGCTTCGGCATTGTTCTGCTAGAGATCGCGTGCACAGGCAAGTCCAGGGAGCAGATCTGCGGCTTGTACTGAAGCAAAGGTGATGTCGTTGAGGCAGCAGACACAAAGCAAGAGATTGGTGGTGACTTTGAAAGGAGGGAGAAGGAGCGTGTCATCATCTTGGGGCTCTGGTGCTCTGCCTTTGAGACTAAAGATCGGCCGACCATGCAGCAAGCAATGGATGTCCTGGAGCGTAATGCACCGTTGCCTGACCATTATAATTTCATCACCGACTCTGCTTTTGCCTCATCAGACCATGATGCCTCCAGCGCTTCTGTTGCCAATAGCTACGAGGAGGCACCACTCTATTCAAGCGGTTCTTCTGCATAG
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| CDS seq | ATGTGCGGCTGGTGCTGTAACATGGAGAACAAGGAGCTTTTTCTTGTCTACGAATTGATGAAAAATGGCAACCTCCACGAGTACTTGCACGAGAGCGAGAATATTGGCTCGGCTCTATTCTACCTACATCATGACTGCAATCCATATATCCTGCACAGAGATATTAAGCCAGGCAATATACTCTTAGATGAGAATTTTAATGCCAAGCTTGCTGATTTTGGTTTGTCAAGAATTGCGAACCCGGACAACAATGCAATGTTGCAAACAACTGTGGTAGGCAATGCAGAAGAGTATGTAGGTGTACAGACAATTGCCGTAGGCACGGAAGGGTACATAGATCCACAGTGCAAGAAAGATGGCACGGTCAGGTTCAACTGCCTCTCAGATGTGTACAGCTTCGGCATTGTTCTGCTAGAGATCGCGTGCACAGGCAAGTCCAGGGAGCAGATCTGCGGCTTCAAAGGTGATGTCGTTGAGGCAGCAGACACAAAGCAAGAGATTGGTGGTGACTTTGAAAGGAGGGAGAAGGAGCGTGTCATCATCTTGGGGCTCTGGTGCTCTGCCTTTGAGACTAAAGATCGGCCGACCATGCAGCAAGCAATGGATGTCCTGGAGCGTAATGCACCGTTGCCTGACCATTATAATTTCATCACCGACTCTGCTTTTGCCTCATCAGACCATGATGCCTCCAGCGCTTCTGTTGCCAATAGCTACGAGGAGGCACCACTCTATTCAAGCGGTTCTTCTGCATAG
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| Protein seq | MCGWCCNMENKELFLVYELMKNGNLHEYLHESENIGSALFYLHHDCNPYILHRDIKPGNILLDENFNAKLADFGLSRIANPDNNAMLQTTVVGNAEEYVGVQTIAVGTEGYIDPQCKKDGTVRFNCLSDVYSFGIVLLEIACTGKSREQICGFKGDVVEAADTKQEIGGDFERREKERVIILGLWCSAFETKDRPTMQQAMDVLERNAPLPDHYNFITDSAFASSDHDASSASVANSYEEAPLYSSGSSA |
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| Function | Probable kinase CHARK [UniProtKB/Swiss-Prot:Q2QRN7] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsN22_04G001590 | OsN22_04G001590_01 | Chr04 | 2144797 | 2146087 | + | NAM | ||
| CDS seq | ATGTGCGGCTGGTGCTGTAACATGGAGAACAAGGAGCTTTTTCTTGTCTACGAATTGATGAAAAATGGCAACCTCCACGAGTACTTGCACGAGAGCGAGAATATTGGCTCGGCTCTATTCTACCTACATCATGACTGCAATCCATATATCCTGCACAGAGATATTAAGCCAGGCAATATACTCTTAGATGAGAATTTTAATGCCAAGCTTGCTGATTTTGGTTTGTCAAGAATTGCGAACCCGGACAACAATGCAATGTTGCAAACAACTGTGGTAGGCAATGCAGAAGAGTATGTAGGTGTACAGACAATTGCCGTAGGCACGGAAGGGTACATAGATCCACAGTGCAAGAAAGATGGCACGGTCAGGTTCAACTGCCTCTCAGATGTGTACAGCTTCGGCATTGTTCTGCTAGAGATCGCGTGCACAGGCAAGTCCAGGGAGCAGATCTGCGGCTTCAAAGGTGATGTCGTTGAGGCAGCAGACACAAAGCAAGAGATTGGTGGTGACTTTGAAAGGAGGGAGAAGGAGCGTGTCATCATCTTGGGGCTCTGGTGCTCTGCCTTTGAGACTAAAGATCGGCCGACCATGCAGCAAGCAATGGATGTCCTGGAGCGTAATGCACCGTTGCCTGACCATTATAATTTCATCACCGACTCTGCTTTTGCCTCATCAGACCATGATGCCTCCAGCGCTTCTGTTGCCAATAGCTACGAGGAGGCACCACTCTATTCAAGCGGTTCTTCTGCATAG
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| Protein seq | MCGWCCNMENKELFLVYELMKNGNLHEYLHESENIGSALFYLHHDCNPYILHRDIKPGNILLDENFNAKLADFGLSRIANPDNNAMLQTTVVGNAEEYVGVQTIAVGTEGYIDPQCKKDGTVRFNCLSDVYSFGIVLLEIACTGKSREQICGFKGDVVEAADTKQEIGGDFERREKERVIILGLWCSAFETKDRPTMQQAMDVLERNAPLPDHYNFITDSAFASSDHDASSASVANSYEEAPLYSSGSSA
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0135400 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g05470 | SBH | 0.0 | 0.0 | 0.073992 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0135400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0001490 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0001480 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0001430 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0001480 | SBH | 0.0 | 0.127481 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0001520 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0036100 | RBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0001740 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0031500 | RBH | 0.026705 | 0 | 0.009732 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0001490 | RBH | 0.0 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0001720 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0001560 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0001390 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0001550 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G001570 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0001570 | RBH | 0.0 | 5.281760 | 0.0 |
