Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsN22_03G021750 | OGI:03047430 | 16/16 | N22 | OsN22RS2 | Gramene(+IsoSeq) | Chr03:18634209-18641073 | ||||||||
| Gene Symbol | RLCK112, OsPUB57, OsRLCK112 | ||||||||||
| DNA seq | CTAGGTTTCTGACAACTGCTGTTGGTAAGCAGGGTTCGGCTGCTGCTGCTGAAGATACCCATGGATGAAAGAACGGAGGACACGATTAGGGACGAGATTGAGATTGGGAAGGGCCAAATTCGTCATCGGAGACCTACTAATCCCTCTATCAAACCAGCACCTTATGGCCTCCGCTTCATAGGTGAATCCATCAGATGCCACTTGCGGATCTTTCATGATCTCCTGAAATATTAGCAGGAGAGAAACATATCACATATGCACTGTAAAAGTTTTGGTTTCTGAAGATTTCAAGAAAAAATAGAAAAAGGATATTCAGCAGTTAAAGGAGAATTAGGAGCATTTATCCAGAATTGAAGCTGCAAAAATAATGATTACAGATTTATTTACCATGCTAATTGGACAAATAAAAGCAGCAGGTACACTGCTATCTCCTGATGCTGATTGCAAGTATGGCCAGGTGGCTGCAGGAGGCTTCCTCGTGAGGGGCTCAATAACTATCCACACCTCGTTTAAGAGATCAGGCCGTTTCTTCCTCGTCATTCCAGTGCAGCTAAGGCCAATGAGTGCTAAATGTTTGGCTTCAATGTAAGGCCAGTCCCCTGCAGATTTATCTATCAGCAAGTGCAAGCTATCACTCCCCAATGCTTCTGCAACTTTCTCTGATAGAGTTAAGGGGGGCATTCCGGTCAAGAGCCGTAGGATGATAACACCCAGTGAGTAGACATCAGAGAGTGTTGTGAGCTCTCCGGTGGTGTTGAACTCAGGGTCCATGTACGGCAGCCTTGCCGTCAGGTTTGGTGGGAAGGTCCCAAGCTGCAGAAACAGGTTGGACATACCAAAGTTGCAGATCTTGCTTCTGTAGTTGGCATCAATGAGGATGTTGCAAGGCCTGAGATCACCATGGACCAAAGCAGTAGACTTGTTCGAATGAAGGAAAAGCAGAGCACAACAAATCTCCCAAATGATCTGTGTGCGGTTGTACCAAGAGAGAGGTGCAGAATTATTTGTGCAAATAATGCGGTCTTCAAGATTTCCATTAGGTAGCCATTCATATACTAGAGCGGAGACCTCCGAGCATACTCCTATGAATGTGATAATATTTGGATGTCTCCATTGGCGAAGAATAGAGACCTGCAATAATCTCATATTACTAATGGAATCAACCAACACAGAGTATCACAAGTGGACCAGGTTACCTCTTGTTGAAATAACTTTTGGGAACTGGACAGCTTGATTAACACCTTCATATTGTGTATCATGCCTTTATATGTGTGCCCATATTCAGTATCACCAACCTCCCTAGCATTTTTGAAATGTTCTGTTGCTTGCTCCATGTCCTTGCGGGAGAAATCGAGAATGATATGTGTGCTCTGGTCGCGTAATTCATTCACTTGTTGCACAGCATTGTCTCGTTCATGTTTCAACTGATCATACGCTTCATTACAAAGACGGGGTTTAAATATTGTTGCCGTTAATCTATCTTTTAACCCATAACAAGACAAAATCTGACAGTCTGGCTGATATACCTGTCACGGCCTTTTCTTTCTGAACAAGATATGTATCAGACTGGTGTTTTAATGTAACAATCTCCTCTTCTAAAATGTGTACCTTCCTCACTTCTTCATACGTCTAATTAAATAAGGAATATATAATTGGTTAAATGTAAAAGATCAATACAAAAAATCAGCTGAACTCAACTTTGAACTTATAGCCACACCATCAAGATACTTTTATGGATGATCAAAAGCCATGAAAGCATACAAGGAAGAACAATATGAAAAAATATTTACTGAAAATACAGTAAAGTTCCTGTTAAAAAAAACCTACAGCAGGGAAGAAGAGAGCAACGTAGAACTACCTTCTGATCACAAACATGCTGGAGAAAAGATGCAACAGAAGGATATTTTGGTATGTCCGGTGGCTTCAAGATTTTTTGGAAGCAAATAATGTCCCCAGTTATAATCTGCAGAAAGAAAGAGATGAAATTACAATTTTACGGAAGAACGGGAGTGTACAAAAGAGAAACAAACCTCGCCAGCTGAAAAGGTATTATGAATGTCAATGGCTTCACACCACACTGAAGGTTCAAATTTTATTTCCTGCTTGTTGAAGTGCGAAACCAGTACAGATGAGATAAAACTGTTCATTCGAGAATTGGAGAACCCGGTTTGCATCAGTAGAAAGTCTGACCTCACGGTTCCAATAGATCAGTCGAAAGACTTGCAAGACCTCTACCTCGCATGAACGAGACAAGTGTTGGGTGATGGGAAGAACACCAAATTTTGGCTGGCGGACTGGTTGCCGGTGGGGAGCATAAAGTCGAGATTCCCCTTGATCTTCAGCCATGTCGAGCGCTCGGGCTTGACGGTGGCACGAGGGCTTCTGAACCACAGGTGGGTACGAGACATCAAGGGGGTACCCTCCAATCACGCAATTGGGGAATACTTTCAGATTTGGGACGCGGTCCAGGGGGTGCAACTTCAAGATGGGGAGGAAGATGAGACAATCTGGAAGTGGGCACCAAATGGAAAATACACTCCCTGCTCGTTCTACAGCATGTTCTTCATGGCAAACACGGTGGCGCGATGTGGTACTCTGATTTGGCAAACAAGAGCGCTGTCAAAGGTGAAATTCTTTATGTGGTTGGCCGAAAAAGGGCGATGCCTCACGGCGGATAATCTAAGTAAGCGTGGCTGGCCGCACCAGCAGGTTTGCCAACTTTGCTTGGTGGGTGATGAAGATTGTGAACACCTATTTGTGTCTTGCACCTACACGACCAGGGTGTGGAGAATGATCAAGGGCTGGATTGGGGTTGGCTTCCTGCTGCCATCTGAGTCAGGCTTGGACTTGGGCGAATGGTGGTTAGCGATGCGGCAAAATTTTCGGAACAACTACAGGGACGCCATTGACAGCCTTGTGCTGCTTGTTTGTTGGATGGTTTGGAAGGAAAGAAATGCGCGTGTGTTTCAGAACCAGCGGCGCTCAGCCGGTTTCCTGTTTGGTTCAATCAAAGAGGAAGTGGCGATTTGGAAGGAAGCTGGGGTTTTCAGAAATATAGGAGAGTAGTCTCTTAGTGTAATCTTTTGCTTTTGGGAAGTTGCTCCGGTGACAATTTCCATTACTTCGACAGCTTCTTGTTGAAGTAATAACTTTGTATATTTGTATATATTCTTCAATCTTAAGTAAATTTGGTTGGCCTTTCTTGGCTGGCCCGGCAAAAAAAAAAAAGAAAGTCTGACCTCGTACAATTCTATCGTTTCGCTTAAACAGAAACCAGCTAAACTTCTTAGTTTTGGAAGAATTTCTGAAGGCCTCGATGCAACTTTCACGGACAGCAATCCAACATACCTAATTTCTCATTCAAAGAAACAAATTTTAGTCAGCCTTATCAACTGATAAATAAGACAAAAAAATGCAGCAAAGAAGTTGACCTTAGCTGTGCTTTCCCTGGGTCATAATGCTTTAGAAACACCAGTGCATCATCCATGTTGCTCCATGTTGGTAGGGAATTAGTGTTGAGCACCTAAAATGTGACAATATTCTGAGACTTTGACAGAATGACAAATCAATGGATGAAACCAGAAGGGTCCTTTCCCCCCAAATAAACAATAAAATATAGAGTAAATTTCATAAAACCACCTATTATGGTCCAAGTTGCACAAAACCACAGAAATTTTGGCACATGACACATAACCCTAGGTATTATGGTCCTAAAGTTTCACAAAAACCATAGTGGTAACCAATTTTACATACTCTTATATCAAAAAGAATTAAAAAATTACTTAGATGCGTGTAATATTTATATGATGGATAAAGAGCTCATAAATTTGAGATGTGATTGTAGAACTCAAAAGTGTGGATGATAAATAATGTGGTTTTGTGAAACTTTATAGCCATAATACTTGGGGTTAAGTGCCACGTGCTAAAACCCATATGGTTTTGTGCAACTTAGACAACAATACCTAGGATTGAATGAAATTTACTCTAAAATATATTATCTAAAGTTCAAGCTTAACCTCCAGAAAAAGCTGTAGATGATCTCCTTCGAAACACAATGCTGAAATTAGACTTTCTACCTACAAGAGTGTGCATTCATAACTTTAATTTTCACTAAACCAAAGAGTATATATCTCTCTGTATGAACTCAGTAGATCAAAATACAGCATACTTCCTACACAGAAAGGGCATGCATAGCTATAAAATAAATGGAAAGAAATATAAGGGTAATAACGGCACATACCATATTTCATTCAAAATTTAATAGGATGCTATCTGATCAAGATGGTACGCCTACAAATATAGTAATATACCATGCTGCTGAAAGTGAATATACCAATGCAGGTATGCCTTAAAAAAGCAATCAATTAAAAGAATTTTTTTTTGCTTTTGAAAACTACATCCACTCCTTAGCGCGCCTTTTAAGGGAATCACAAGGAAAGTGCAGAATGACTGGGGTCTGGGAGCTAACATTTGGCACTTGGCAGCACTAAACAGACAACATCTGCAATGGATGGAGATGTGTACAAGGCTCCTATAATAATCCCTGATGGTTTCTTGCATGTCTTTGTGAAATAAGAAGCGAACAAACCAACTGTAGTTGCTGCTTTATTAATGCGCCATTCATGGAAGTGAATTACTGAACCAATTTTAGAGTCACATTTTTCCTTTAGTTTTAATTGAGTCGATGGTCTATAGTAGCAGTAATGTATTAGCAAATGCGATTAGCCAAAGAGCCGAGCTATTTTATTTTTTCTAGAGGTGTTTAATTGAAGTTTGAATTATATTTCTTTTTTCATGTTTGAGTCCATGTCGAGTGCATGGCCTAAGAACCATACTATGTAGAGGTGGAATCCAGTTAATTTGCCGGCATGCCTAATCATAGTTGGGCTGAATGCCGTATTAAGTCTTGTAGATGATTCAGAGAGTTAACGTATTGACTATTGTTGGTACTGTGAAAGAGAGGGTGAGATTAGGGTACTCGACACTAGGTACCCATCATATTGTGAGCAGAATTCAAAATTCAAAATTATGGTGCCAAGTAAGTTAATTATGGCAGGACAACATTCATGAGAAGTTACCATCTACAGAAAATGAGGGGCTAGATCTATTAGTTGGTGTTGGTTCAGACTGACCTGTCAGCTATGCACAGGCTTGAAGGAAACCCTTCATTTTGATTTCTTACTCCACACAGAAGACTTTAGATTAAAGATATATAACAAGCTGCTGAAAGTCGATATACCCAAGCAGGTATGCTTAAAAAAGCAACAAATTGATAGTCACATTTTGCTTTTGAAACTTCATCTTCTCTTCAGCACACTTTTGAGGAAGATGACATGGCAAGTGCAGAATGACTGCAAACTAGCCTTTGACGCTTACCAGCACTAAACAAAATGCATCTGCAATCTAAGTAAGCAGGATTCATAATTCAAAATTATGGTGCAGAATGAAGCCAATAATGGAAGGGAAAAAATCATGTGAAACCTCTAGAAAAATGAGGTAATGGATCTATTTGTAGTTTATAATACTTCAGTCTGACCGATCAGACATGCACAGGCTTGAAGGGAACCCTTCATTCTCTAATTTCTTACTCAGCACATAACTGTTTAGGTTCAAATGAAAGAGCATTTTTTACTGCATGGGACAAAACAGTATTAAGAACCAAGAGAAAATAAGGTGATCACAATGTTTTACTGACAGGTAGATTCTCCTCTTCGGTTGTCAACGGCCTGTCAACACGGTATGTGTTGTTCTGACGTCTAGCCCACCACCACAGGCGTTGACATTGCAGAGGGGTTCCAAATTTCTCCGTGAGCTTCTCCTGTAAAAAGTTGAACCTATCAGAACTCTATATGAAATATGAAACATAAGAACGACAAGCTGCACAATAAACAATCATACAGGGTTGTCAGCTTACATGTGTAAAGTTATACATCTCGCAAATAACCACGCTGTCCTTATTAGAGCAAACCTAAAATAGCATATTTAAAAGAGACAATAGTTGGGAGCTGGCTGTATTGTACCAATTGTCTTTTTTGGAGTGTATAGATTTTTTTTAGATAATGGAATAAAGAACCCCGCGTCTACAGCTTGCAATGCACACAGCCATGAGTGGCGTATATAGGATAAGTTCACAAGGAAACCAAATGCAATGGTTGGTTACATGGTTTCCAGGATAAATACTCGTCATGACAATGACTACGAACTTTCTAAGTTGTGCATTGGTTCCCATAAGATATAAAATGTCAAGTCAAGCGATCCATTTCCTTAATGCTCATTATCATTTTTTTTTTCTTCTGAATCTGTTCAAAAAACATTTTTTTCCCTGACTCTGTTCCAAAAAAAAAACTGAACAATCAAAACAAATTAGTCCTTATTTTCCTATATAGGATATAGGATGCCAGGATGGTGCCAAATCCATCCCAGACCATTTATTCTTGACATAATTTTCCGAATAGTCATCTTCTAATGTTTGTCAGATTCCTCTATACATTCCACAACAATATGTGAAAGGACTAAGAGTACAACTACTACAGTAGTAAGCAACTCATTAGAAGAAGCAGCACACCCATCTTATGGGATTCACTACCTTGAATCGGAGGATGGTCATGGTAGGCGGGACGTTGAATCCCTCGATTGCGCTGAAGTCGATGAGATCGAAGTAGTGGCCATCTTCCCCAATACGCGAGCGGAAATCCTCTTCCCTTACCACCTAATCAGACCAACAAACCCAACAAGTGGTCAAGAATCCGAATCCCCAATGGATTTTGCGCTGGTGCGGAGAATCCAATCTGCGCGAGAAGAAGGGGTCGCGGGGAAGATCGCAACAGCGCTGCGGCACCTTGATATGACTGTACGGCGGCGGCAT
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| CDS seq | ATGCCGCCGCCGTACAGTCATATCAAGGTGGTAAGGGAAGAGGATTTCCGCTCGCGTATTGGGGAAGATGGCCACTACTTCGATCTCATCGACTTCAGCGCAATCGAGGGATTCAACGTCCCGCCTACCATGACCATCCTCCGATTCAAGGAGAAGCTCACGGAGAAATTTGGAACCCCTCTGCAATGTCAACGCCTGTGGTGGTGGGCTAGACGTCAGAACAACACATACCGTGTTGACAGGCCGTTGACAACCGAAGAGGAGAATCTACCTGTGCTCAACACTAATTCCCTACCAACATGGAGCAACATGGATGATGCACTGGTGTTTCTAAAGCATTATGACCCAGGGAAAGCACAGCTAAGGTATGTTGGATTGCTGTCCGTGAAAGTTGCATCGAGGCCTTCAGAAATTCTTCCAAAACTAAGAAGTTTAGCTGGTTTCTGTTTAAGCGAAACGATAGAATTGTACGAGTTGCACCCCCTGGACCGCGTCCCAAATCTGAAAGTATTCCCCAATTGCGTGATTGGAGGGTACCCCCTTGATGTCTCGTACCCACCTGTGGTTCAGAAGCCCTCGTGCCACCGTCAAGCCCGAGCGCTCGACATGGCTGAAGATCAAGGGGAATCTCGACTTTATGCTCCCCACCGGCAACCAGTCCGCCAGCCAAAATTTGGTGTTCTTCCCATCACCCAACACTTGTCTCGTTCATGCGAGGAAATAAAATTTGAACCTTCAGTGTGGTGTGAAGCCATTGACATTCATAATACCTTTTCAGCTGGCGAGATTATAACTGGGGACATTATTTGCTTCCAAAAAATCTTGAAGCCACCGGACATACCAAAATATCCTTCTGTTGCATCTTTTCTCCAGCATGTTTGTGATCAGAAGACGTATGAAGAAGTGAGGAAGGTACACATTTTAGAAGAGGAGATTGTTACATTAAAACACCAGTCTGATACATATCTTGTTCAGAAAGAAAAGGCCGTGACAGCGTATGATCAGTTGAAACATGAACGAGACAATGCTGTGCAACAAGTGAATGAATTACGCGACCAGAGCACACATATCATTCTCGATTTCTCCCGCAAGGACATGGAGCAAGCAACAGAACATTTCAAAAATGCTAGGGAGGTTGGTGATACTGAATATGGGCACACATATAAAGGCATGATACACAATATGAAGGTGTTAATCAAGCTGTCCAGTTCCCAAAAGTTATTTCAACAAGAGGTCTCTATTCTTCGCCAATGGAGACATCCAAATATTATCACATTCATAGGAGTATGCTCGGAGGTCTCCGCTCTAGTATATGAATGGCTACCTAATGGAAATCTTGAAGACCGCATTATTTGCACAAATAATTCTGCACCTCTCTCTTGGTACAACCGCACACAGATCATTTGGGAGATTTGTTGTGCTCTGCTTTTCCTTCATTCGAACAAGTCTACTGCTTTGGTCCATGGTGATCTCAGGCCTTGCAACATCCTCATTGATGCCAACTACAGAAGCAAGATCTGCAACTTTGGTATGTCCAACCTGTTTCTGCAGCTTGGGACCTTCCCACCAAACCTGACGGCAAGGCTGCCGTACATGGACCCTGAGTTCAACACCACCGGAGAGCTCACAACACTCTCTGATGTCTACTCACTGGGTGTTATCATCCTACGGCTCTTGACCGGAATGCCCCCCTTAACTCTATCAGAGAAAGTTGCAGAAGCATTGGGGAGTGATAGCTTGCACTTGCTGATAGATAAATCTGCAGGGGACTGGCCTTACATTGAAGCCAAACATTTAGCACTCATTGGCCTTAGCTGCACTGGAATGACGAGGAAGAAACGGCCTGATCTCTTAAACGAGGTGTGGATAGTTATTGAGCCCCTCACGAGGAAGCCTCCTGCAGCCACCTGGCCATACTTGCAATCAGCATCAGGAGATAGCAGTGTACCTGCTGCTTTTATTTGTCCAATTAGCATGGAGATCATGAAAGATCCGCAAGTGGCATCTGATGGATTCACCTATGAAGCGGAGGCCATAAGGTGCTGGTTTGATAGAGGGATTAGTAGGTCTCCGATGACGAATTTGGCCCTTCCCAATCTCAATCTCGTCCCTAATCGTGTCCTCCGTTCTTTCATCCATGGGTATCTTCAGCAGCAGCAGCCGAACCCTGCTTACCAACAGCAGTTGTCAGAAACCTAG
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| Protein seq | MPPPYSHIKVVREEDFRSRIGEDGHYFDLIDFSAIEGFNVPPTMTILRFKEKLTEKFGTPLQCQRLWWWARRQNNTYRVDRPLTTEEENLPVLNTNSLPTWSNMDDALVFLKHYDPGKAQLRYVGLLSVKVASRPSEILPKLRSLAGFCLSETIELYELHPLDRVPNLKVFPNCVIGGYPLDVSYPPVVQKPSCHRQARALDMAEDQGESRLYAPHRQPVRQPKFGVLPITQHLSRSCEEIKFEPSVWCEAIDIHNTFSAGEIITGDIICFQKILKPPDIPKYPSVASFLQHVCDQKTYEEVRKVHILEEEIVTLKHQSDTYLVQKEKAVTAYDQLKHERDNAVQQVNELRDQSTHIILDFSRKDMEQATEHFKNAREVGDTEYGHTYKGMIHNMKVLIKLSSSQKLFQQEVSILRQWRHPNIITFIGVCSEVSALVYEWLPNGNLEDRIICTNNSAPLSWYNRTQIIWEICCALLFLHSNKSTALVHGDLRPCNILIDANYRSKICNFGMSNLFLQLGTFPPNLTARLPYMDPEFNTTGELTTLSDVYSLGVIILRLLTGMPPLTLSEKVAEALGSDSLHLLIDKSAGDWPYIEAKHLALIGLSCTGMTRKKRPDLLNEVWIVIEPLTRKPPAATWPYLQSASGDSSVPAAFICPISMEIMKDPQVASDGFTYEAEAIRCWFDRGISRSPMTNLALPNLNLVPNRVLRSFIHGYLQQQQPNPAYQQQLSET |
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| Function | U-box domain-containing protein 57 [UniProtKB/Swiss-Prot:Q0DR28] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsN22_03G021750 | OsN22_03G021750_01 | Chr03 | 18634209 | 18641073 | - | NAM | ||
| CDS seq | ATGCCGCCGCCGTACAGTCATATCAAGGTGGTAAGGGAAGAGGATTTCCGCTCGCGTATTGGGGAAGATGGCCACTACTTCGATCTCATCGACTTCAGCGCAATCGAGGGATTCAACGTCCCGCCTACCATGACCATCCTCCGATTCAAGGAGAAGCTCACGGAGAAATTTGGAACCCCTCTGCAATGTCAACGCCTGTGGTGGTGGGCTAGACGTCAGAACAACACATACCGTGTTGACAGGCCGTTGACAACCGAAGAGGAGAATCTACCTGTGCTCAACACTAATTCCCTACCAACATGGAGCAACATGGATGATGCACTGGTGTTTCTAAAGCATTATGACCCAGGGAAAGCACAGCTAAGGTATGTTGGATTGCTGTCCGTGAAAGTTGCATCGAGGCCTTCAGAAATTCTTCCAAAACTAAGAAGTTTAGCTGGTTTCTGTTTAAGCGAAACGATAGAATTGTACGAGTTGCACCCCCTGGACCGCGTCCCAAATCTGAAAGTATTCCCCAATTGCGTGATTGGAGGGTACCCCCTTGATGTCTCGTACCCACCTGTGGTTCAGAAGCCCTCGTGCCACCGTCAAGCCCGAGCGCTCGACATGGCTGAAGATCAAGGGGAATCTCGACTTTATGCTCCCCACCGGCAACCAGTCCGCCAGCCAAAATTTGGTGTTCTTCCCATCACCCAACACTTGTCTCGTTCATGCGAGGAAATAAAATTTGAACCTTCAGTGTGGTGTGAAGCCATTGACATTCATAATACCTTTTCAGCTGGCGAGATTATAACTGGGGACATTATTTGCTTCCAAAAAATCTTGAAGCCACCGGACATACCAAAATATCCTTCTGTTGCATCTTTTCTCCAGCATGTTTGTGATCAGAAGACGTATGAAGAAGTGAGGAAGGTACACATTTTAGAAGAGGAGATTGTTACATTAAAACACCAGTCTGATACATATCTTGTTCAGAAAGAAAAGGCCGTGACAGCGTATGATCAGTTGAAACATGAACGAGACAATGCTGTGCAACAAGTGAATGAATTACGCGACCAGAGCACACATATCATTCTCGATTTCTCCCGCAAGGACATGGAGCAAGCAACAGAACATTTCAAAAATGCTAGGGAGGTTGGTGATACTGAATATGGGCACACATATAAAGGCATGATACACAATATGAAGGTGTTAATCAAGCTGTCCAGTTCCCAAAAGTTATTTCAACAAGAGGTCTCTATTCTTCGCCAATGGAGACATCCAAATATTATCACATTCATAGGAGTATGCTCGGAGGTCTCCGCTCTAGTATATGAATGGCTACCTAATGGAAATCTTGAAGACCGCATTATTTGCACAAATAATTCTGCACCTCTCTCTTGGTACAACCGCACACAGATCATTTGGGAGATTTGTTGTGCTCTGCTTTTCCTTCATTCGAACAAGTCTACTGCTTTGGTCCATGGTGATCTCAGGCCTTGCAACATCCTCATTGATGCCAACTACAGAAGCAAGATCTGCAACTTTGGTATGTCCAACCTGTTTCTGCAGCTTGGGACCTTCCCACCAAACCTGACGGCAAGGCTGCCGTACATGGACCCTGAGTTCAACACCACCGGAGAGCTCACAACACTCTCTGATGTCTACTCACTGGGTGTTATCATCCTACGGCTCTTGACCGGAATGCCCCCCTTAACTCTATCAGAGAAAGTTGCAGAAGCATTGGGGAGTGATAGCTTGCACTTGCTGATAGATAAATCTGCAGGGGACTGGCCTTACATTGAAGCCAAACATTTAGCACTCATTGGCCTTAGCTGCACTGGAATGACGAGGAAGAAACGGCCTGATCTCTTAAACGAGGTGTGGATAGTTATTGAGCCCCTCACGAGGAAGCCTCCTGCAGCCACCTGGCCATACTTGCAATCAGCATCAGGAGATAGCAGTGTACCTGCTGCTTTTATTTGTCCAATTAGCATGGAGATCATGAAAGATCCGCAAGTGGCATCTGATGGATTCACCTATGAAGCGGAGGCCATAAGGTGCTGGTTTGATAGAGGGATTAGTAGGTCTCCGATGACGAATTTGGCCCTTCCCAATCTCAATCTCGTCCCTAATCGTGTCCTCCGTTCTTTCATCCATGGGTATCTTCAGCAGCAGCAGCCGAACCCTGCTTACCAACAGCAGTTGTCAGAAACCTAG
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| Protein seq | MPPPYSHIKVVREEDFRSRIGEDGHYFDLIDFSAIEGFNVPPTMTILRFKEKLTEKFGTPLQCQRLWWWARRQNNTYRVDRPLTTEEENLPVLNTNSLPTWSNMDDALVFLKHYDPGKAQLRYVGLLSVKVASRPSEILPKLRSLAGFCLSETIELYELHPLDRVPNLKVFPNCVIGGYPLDVSYPPVVQKPSCHRQARALDMAEDQGESRLYAPHRQPVRQPKFGVLPITQHLSRSCEEIKFEPSVWCEAIDIHNTFSAGEIITGDIICFQKILKPPDIPKYPSVASFLQHVCDQKTYEEVRKVHILEEEIVTLKHQSDTYLVQKEKAVTAYDQLKHERDNAVQQVNELRDQSTHIILDFSRKDMEQATEHFKNAREVGDTEYGHTYKGMIHNMKVLIKLSSSQKLFQQEVSILRQWRHPNIITFIGVCSEVSALVYEWLPNGNLEDRIICTNNSAPLSWYNRTQIIWEICCALLFLHSNKSTALVHGDLRPCNILIDANYRSKICNFGMSNLFLQLGTFPPNLTARLPYMDPEFNTTGELTTLSDVYSLGVIILRLLTGMPPLTLSEKVAEALGSDSLHLLIDKSAGDWPYIEAKHLALIGLSCTGMTRKKRPDLLNEVWIVIEPLTRKPPAATWPYLQSASGDSSVPAAFICPISMEIMKDPQVASDGFTYEAEAIRCWFDRGISRSPMTNLALPNLNLVPNRVLRSFIHGYLQQQQPNPAYQQQLSET
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.106711 | 0.000000 | 0.081055 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0424200 | RBH | 0.987426 | 0.979671 | 1.310185 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g31070 | RBH | 0.675050 | 0.687089 | 0.475096 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0424200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0022240 | RBH | 0.483672 | 0.685707 | 3.045267 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0022100 | RBH | 0.113160 | 1.451082 | 1.874790 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0022160 | RBH | 0.711650 | 1.872541 | 7.518661 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0022150 | RBH | 0.129453 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0021950 | RBH | 4.541777 | 2.418036 | 5.789290 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0292200 | RBH | 1.510713 | 5.661887 | 1.2031535 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0021690 | RBH | 0.094580 | 0.000000 | 0.357661 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0295600 | RBH | 1.517058 | 7.220429 | 6.658662 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0021980 | RBH | 0.098928 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0021980 | RBH | 0.210245 | 1.193130 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0022060 | RBH | 0.000000 | 7.878320 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0021930 | RBH | 0.349841 | 0.000000 | 0.397436 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0021780 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G021730 | RBH | 0.181368 | 0.000000 | 0.459045 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0021660 | RBH | 0.324180 | 3.095304 | 1.750864 |
