Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsN22_02G029880 | OGI:02080400 | 16/16 | N22 | OsN22RS2 | Gramene(+IsoSeq) | Chr02:29921484-29923377 | ||||||||
| Gene Symbol | OsMYB58/63-L, MYB58/63-L, OsMYB58/63a, MYB58/63a | ||||||||||
| DNA seq | AACCAAAAAAAAAAGTTACATGCATTAGCAAAAGCAAACGCTTTTGATATCATAATTGAGATCCGGTGATGATTCTCAAAAGGATGCTATGTACGTTGGTAGCAGTAGTGGTAGGCCTCAGATGTTGGTTCTGATGACCAACCGCTTACGTCACGATGACGGCATGCGGTATGAATTTGCAAACTCATTGGCACTTCTCAATAATATAAGTACAAATGCTACAATATAGGAGTGTGTGATATATATAGCACTTCTCATTGGCTCTTCAATGGAGTGCCGTCCCATGCCCAATCAAAAACTACATTTTCTTGGGTTAAAAATGTTAAAAAAAGAGCACTAGAAGGTAGTAAACACTTGTGTTGTGTCTCTACTACACTTTCGCCTTGTGTTTGACGGCTTGACCCTTTTTGTATGTGCATCCTAGTTAATCTAAACCTTCGCCATTTACTGCAACACCAAACAAATTAATCACTCTTCGTCGTCGCGTCAAATATAGCGGGTAAATTGTGTTGATCGATTCGTATTTGCTGTAGATGATAGTGCAGTGGCCGATCTATCTTGATCGATCTATCTCGTCCGTTGGATCAGATCACTATTGGTTAAACTCCGCCTTCTGCTCCAAATCGGACGGACGTGATCCATCGGTGGAATCATGAGAGAACGGCGGGTGATGCGATCTCCTGGAGCGGAGAGGCGGTGGGCCCGGACTGGAAGTAGGTGGAGACTGGGTCCCCCTCTGTTTCCGTGAGTGGGCCCGGGTAACAAACCTGTCCGGGTGGGTCCGGATGGGCCAGGGACTCGTCCATGGGCCCCCACAGGCCGAGCTCCTTCTCCAAATTCTCTACCCACCACTCTGCTCCCTCCTCTCCCGGGCTGGCGGTACATGGCACTGTTGCATCGCCGTCGCCGGGCTCATCGCCGCCGTAGCCGTCGATGATGCTCCATATATCCGGCTCGATGTCGATCTCCGGCAGGTCGAGCAGCTCGTCCGACACGGCGCCGACGCACGTCGTCGTCGTCAGGGAGGACGACGAGCACGGGGACGGCGGCATTGGCGCCGCGACCAGCGGCGCCTCCGTGGGCGCGTCCACCAGCATGTCCGAGATGTCGATGTCTTGCTCGAAGAAGGACACGTCGACGTTCTCGGGCTCCTTGCTCGTGCCGCACTGCTCGCCGGCCGTGTCGCCGCTGTTGTTGTTATTGGCCGCCGTCGTCGTCGAGGAGGACGCCGACGACGACGGGGAATGCGCGTCGGCGTCGTCGCTGGCGTCCGCGGCCTTGCCCTTCTTCTTGGTGTCACCTGGCTTCTCTCTCTGCGACACCCTCTTCTTCAGGTGGGTGTTCCACACGTTCTTGATCTCGTTGTCCGTCCTCCCGGGCAGGCACGACGCGATCTTGGACCACCTGAGCAAAAAACCAAATCCGATGAGACCGACCACGAGATCGAACACGCAAGAATTAACTAACACCCAAGCATTGAGGGCCAACGAAGAACTTACTTGTTCCCGAGTAGGCCGTGCAGCTTGATGATGGTGTCCTCCTCGTCGGCGGTGAAGTTGCCGCGCTTCAGGTCGGGGCGCAGGTAGTTGATCCACCGGAGGCGGCAGCTCTTGCCGCACCGCAGCAATCCGGCCTGCTTGGGGAGGGCTCGCCAGTTGGCGTGGCCGTGCTTCTGGATGTAGGCGATGAGCCGCATGTCCTCCTGCGGCGTCCACGAACCCCTGTTCAGCCCCACCTTGGCGCAGCACGGCGCTCGTCCCCTCCCCATGCCCACCTCTGTCTGAACGTTTCCCGGACAGAGTAGCAGTGGATGATGGATGAAGCAGAAGATGGTGATCGAGAGCGCATGGGAGACCGGGAGGGGGTGGTATATATGTGCACGCGCCGAGGTCTG
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| CDS seq | ATGGGGAGGGGACGAGCGCCGTGCTGCGCCAAGGTGGGGCTGAACAGGGGTTCGTGGACGCCGCAGGAGGACATGCGGCTCATCGCCTACATCCAGAAGCACGGCCACGCCAACTGGCGAGCCCTCCCCAAGCAGGCCGGATTGCTGCGGTGCGGCAAGAGCTGCCGCCTCCGGTGGATCAACTACCTGCGCCCCGACCTGAAGCGCGGCAACTTCACCGCCGACGAGGAGGACACCATCATCAAGCTGCACGGCCTACTCGGGAACAAGTGGTCCAAGATCGCGTCGTGCCTGCCCGGGAGGACGGACAACGAGATCAAGAACGTGTGGAACACCCACCTGAAGAAGAGGGTGTCGCAGAGAGAGAAGCCAGGTGACACCAAGAAGAAGGGCAAGGCCGCGGACGCCAGCGACGACGCCGACGCGCATTCCCCGTCGTCGTCGGCGTCCTCCTCGACGACGACGGCGGCCAATAACAACAACAGCGGCGACACGGCCGGCGAGCAGTGCGGCACGAGCAAGGAGCCCGAGAACGTCGACGTGTCCTTCTTCGAGCAAGACATCGACATCTCGGACATGCTGGTGGACGCGCCCACGGAGGCGCCGCTGGTCGCGGCGCCAATGCCGCCGTCCCCGTGCTCGTCGTCCTCCCTGACGACGACGACGTGCGTCGGCGCCGTGTCGGACGAGCTGCTCGACCTGCCGGAGATCGACATCGAGCCGGATATATGGAGCATCATCGACGGCTACGGCGGCGATGAGCCCGGCGACGGCGATGCAACAGTGCCATGTACCGCCAGCCCGGGAGAGGAGGGAGCAGAGTGGTGGGTAGAGAATTTGGAGAAGGAGCTCGGCCTGTGGGGGCCCATGGACGAGTCCCTGGCCCATCCGGACCCACCCGGACAGGTTTGTTACCCGGGCCCACTCACGGAAACAGAGGGGGACCCAGTCTCCACCTACTTCCAGTCCGGGCCCACCGCCTCTCCGCTCCAGGAGATCGCATCACCCGCCGTTCTCTCATGA
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| Protein seq | MGRGRAPCCAKVGLNRGSWTPQEDMRLIAYIQKHGHANWRALPKQAGLLRCGKSCRLRWINYLRPDLKRGNFTADEEDTIIKLHGLLGNKWSKIASCLPGRTDNEIKNVWNTHLKKRVSQREKPGDTKKKGKAADASDDADAHSPSSSASSSTTTAANNNNSGDTAGEQCGTSKEPENVDVSFFEQDIDISDMLVDAPTEAPLVAAPMPPSPCSSSSLTTTTCVGAVSDELLDLPEIDIEPDIWSIIDGYGGDEPGDGDATVPCTASPGEEGAEWWVENLEKELGLWGPMDESLAHPDPPGQVCYPGPLTETEGDPVSTYFQSGPTASPLQEIASPAVLS |
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| Function | Myb-related protein Zm1 [UniProtKB/Swiss-Prot:P20024] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsN22_02G029880 | OsN22_02G029880_01 | Chr02 | 29921484 | 29923377 | - | NAM | ||
| CDS seq | ATGGGGAGGGGACGAGCGCCGTGCTGCGCCAAGGTGGGGCTGAACAGGGGTTCGTGGACGCCGCAGGAGGACATGCGGCTCATCGCCTACATCCAGAAGCACGGCCACGCCAACTGGCGAGCCCTCCCCAAGCAGGCCGGATTGCTGCGGTGCGGCAAGAGCTGCCGCCTCCGGTGGATCAACTACCTGCGCCCCGACCTGAAGCGCGGCAACTTCACCGCCGACGAGGAGGACACCATCATCAAGCTGCACGGCCTACTCGGGAACAAGTGGTCCAAGATCGCGTCGTGCCTGCCCGGGAGGACGGACAACGAGATCAAGAACGTGTGGAACACCCACCTGAAGAAGAGGGTGTCGCAGAGAGAGAAGCCAGGTGACACCAAGAAGAAGGGCAAGGCCGCGGACGCCAGCGACGACGCCGACGCGCATTCCCCGTCGTCGTCGGCGTCCTCCTCGACGACGACGGCGGCCAATAACAACAACAGCGGCGACACGGCCGGCGAGCAGTGCGGCACGAGCAAGGAGCCCGAGAACGTCGACGTGTCCTTCTTCGAGCAAGACATCGACATCTCGGACATGCTGGTGGACGCGCCCACGGAGGCGCCGCTGGTCGCGGCGCCAATGCCGCCGTCCCCGTGCTCGTCGTCCTCCCTGACGACGACGACGTGCGTCGGCGCCGTGTCGGACGAGCTGCTCGACCTGCCGGAGATCGACATCGAGCCGGATATATGGAGCATCATCGACGGCTACGGCGGCGATGAGCCCGGCGACGGCGATGCAACAGTGCCATGTACCGCCAGCCCGGGAGAGGAGGGAGCAGAGTGGTGGGTAGAGAATTTGGAGAAGGAGCTCGGCCTGTGGGGGCCCATGGACGAGTCCCTGGCCCATCCGGACCCACCCGGACAGGTTTGTTACCCGGGCCCACTCACGGAAACAGAGGGGGACCCAGTCTCCACCTACTTCCAGTCCGGGCCCACCGCCTCTCCGCTCCAGGAGATCGCATCACCCGCCGTTCTCTCATGA
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| Protein seq | MGRGRAPCCAKVGLNRGSWTPQEDMRLIAYIQKHGHANWRALPKQAGLLRCGKSCRLRWINYLRPDLKRGNFTADEEDTIIKLHGLLGNKWSKIASCLPGRTDNEIKNVWNTHLKKRVSQREKPGDTKKKGKAADASDDADAHSPSSSASSSTTTAANNNNSGDTAGEQCGTSKEPENVDVSFFEQDIDISDMLVDAPTEAPLVAAPMPPSPCSSSSLTTTTCVGAVSDELLDLPEIDIEPDIWSIIDGYGGDEPGDGDATVPCTASPGEEGAEWWVENLEKELGLWGPMDESLAHPDPPGQVCYPGPLTETEGDPVSTYFQSGPTASPLQEIASPAVLS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.958138 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0695200 | RBH | 0.0 | 0.000000 | 1.956449 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g46780 | RBH | 0.0 | 0.000000 | 0.416956 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0695200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0029890 | RBH | 0.0 | 0.0 | 2.589500 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0029960 | RBH | 0.0 | 0.0 | 0.354100 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0029820 | RBH | 0.0 | 0.0 | 1.459960 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0029420 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0029640 | RBH | 0.0 | 0.0 | 9.016224 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0464000 | RBH | 0.3457865 | 0.244549 | 0.3805305 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0029440 | RBH | 0.0 | 0.0 | 0.203934 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0491900 | RBH | 0.6631935 | 0.146025 | 0.4231395 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0029740 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0029480 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0029790 | RBH | 0.0 | 3.513774 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0029630 | RBH | 0.0 | 0.0 | 0.704985 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0029310 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G024490 | RBH | 0.0 | 0.000000 | 1.613229 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0029650 | RBH | 0.0 | 0.0 | 2.178640 |
